RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 AXLP30530 894 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 PPM1AP35813 382 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 FOLR3P41439 243 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 AARSP49588 968 aaKnown RBP eCLIP5.27□□□□□ -1.57
SCAF11-214ENST00000550893 PEX3P56589 373 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 PSMC1P62191 440 aaKnown RBP5.27□□□□□ -1.57
SCAF11-214ENST00000550893 POU6F2P78424 691 aaPredicted RBP5.27□□□□□ -1.57
SCAF11-214ENST00000550893 GRIK3Q13003 919 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 TRIM29Q14134 588 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 ZBTB6Q15916 424 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 CCDC142Q17RM4 750 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 HERC4Q5GLZ8 1057 aaPredicted RBP5.27□□□□□ -1.57
SCAF11-214ENST00000550893 KIAA0895LQ68EN5 471 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 FUT10Q6P4F1 479 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 NOTUMQ6P988 496 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 SHC4Q6S5L8 630 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 PRSS55Q6UWB4 352 aaPredicted RBP5.27□□□□□ -1.57
SCAF11-214ENST00000550893 CRELD2Q6UXH1 353 aaPredicted RBP5.27□□□□□ -1.57
SCAF11-214ENST00000550893 USP45Q70EL2 814 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 OTUD6AQ7L8S5 288 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 RD3Q7Z3Z2 195 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 TMPRSS9Q7Z410 1059 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 ZBTB46Q86UZ6 589 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 PDSS2Q86YH6 399 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 THNSL1Q8IYQ7 743 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 VPS52Q8N1B4 723 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 HASPINQ8TF76 798 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 RAD54LQ92698 747 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 SCAMP4Q969E2 229 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 C18orf25Q96B23 403 aaPredicted RBP5.27□□□□□ -1.57
SCAF11-214ENST00000550893 ZNF764Q96H86 408 aaPredicted RBP5.27□□□□□ -1.57
SCAF11-214ENST00000550893 KLHL5Q96PQ7 755 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 TRIB1Q96RU8 372 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 SMOQ99835 787 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 CLSTN3Q9BQT9 956 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 JPH2Q9BR39 696 aaPredicted RBP5.27□□□□□ -1.57
SCAF11-214ENST00000550893 TMEM175Q9BSA9 504 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 DUSP26Q9BV47 211 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 C1orf43Q9BWL3 253 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 APOL6Q9BWW8 343 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 APOL5Q9BWW9 433 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 MRPL9Q9BYD2 267 aaKnown RBP5.27□□□□□ -1.57
SCAF11-214ENST00000550893 CCSER1Q9C0I3 900 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 BRD9Q9H8M2 597 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 KIAA1586Q9HCI6 787 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 SLAMF7Q9NQ25 335 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 PRMT7Q9NVM4 692 aaPredicted RBP5.27□□□□□ -1.57
SCAF11-214ENST00000550893 DACT1Q9NYF0 836 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 TUBGCP4Q9UGJ1 667 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 TCEAL9Q9UHQ7 104 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 MUTYHQ9UIF7 546 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 CD207Q9UJ71 328 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 TNFSF13BQ9Y275 285 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 COX11Q9Y6N1 276 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 SPEGQ15772 3267 aa5.27□□□□□ -1.57
SCAF11-214ENST00000550893 TTC26A0AVF1 554 aa5.26□□□□□ -1.57
SCAF11-214ENST00000550893 ARHGEF35A5YM69 484 aa5.26□□□□□ -1.57
SCAF11-214ENST00000550893 ANKRD62A6NC57 917 aa5.26□□□□□ -1.57
SCAF11-214ENST00000550893 ZNF785A8K8V0 405 aa5.26□□□□□ -1.57
SCAF11-214ENST00000550893 DKC1O60832 514 aaKnown RBP eCLIP5.26□□□□□ -1.57
SCAF11-214ENST00000550893 IL33O95760 270 aa5.26□□□□□ -1.57
SCAF11-214ENST00000550893 KCNE1P15382 129 aa5.26□□□□□ -1.57
SCAF11-214ENST00000550893 LPOP22079 712 aaPredicted RBP5.26□□□□□ -1.57
SCAF11-214ENST00000550893 CASP1P29466 404 aa5.26□□□□□ -1.57
SCAF11-214ENST00000550893 NMT1P30419 496 aaKnown RBP5.26□□□□□ -1.57
SCAF11-214ENST00000550893 BRCC3P46736 316 aa5.26□□□□□ -1.57
SCAF11-214ENST00000550893 MCM2P49736 904 aa5.26□□□□□ -1.57
SCAF11-214ENST00000550893 CLCNKBP51801 687 aa5.26□□□□□ -1.57
SCAF11-214ENST00000550893 MCL1Q07820 350 aa5.26□□□□□ -1.57
SCAF11-214ENST00000550893 SAFBQ15424 915 aaKnown RBP eCLIP5.26□□□□□ -1.57
SCAF11-214ENST00000550893 UPP1Q16831 310 aa5.26□□□□□ -1.57
SCAF11-214ENST00000550893 PREPLQ4J6C6 727 aaPredicted RBP5.26□□□□□ -1.57
SCAF11-214ENST00000550893 ZC2HC1CQ53FD0 456 aaPredicted RBP5.26□□□□□ -1.57
SCAF11-214ENST00000550893 THEMIS2Q5TEJ8 643 aa5.26□□□□□ -1.57
SCAF11-214ENST00000550893 ATF7IP2Q5U623 682 aa5.26□□□□□ -1.57
SCAF11-214ENST00000550893 HAUS3Q68CZ6 603 aa5.26□□□□□ -1.57
SCAF11-214ENST00000550893 FAM90A1Q86YD7 464 aa5.26□□□□□ -1.57
SCAF11-214ENST00000550893 EFCAB13Q8IY85 973 aa5.26□□□□□ -1.57
SCAF11-214ENST00000550893 BOLLQ8N9W6 283 aaKnown RBP5.26□□□□□ -1.57
SCAF11-214ENST00000550893 FAM184AQ8NB25 1140 aa5.26□□□□□ -1.57
SCAF11-214ENST00000550893 LINC00301Q8NCQ3 95 aa5.26□□□□□ -1.57
SCAF11-214ENST00000550893 LNX1Q8TBB1 728 aaPredicted RBP5.26□□□□□ -1.57
SCAF11-214ENST00000550893 SNX19Q92543 992 aa5.26□□□□□ -1.57
SCAF11-214ENST00000550893 HPS3Q969F9 1004 aa5.26□□□□□ -1.57
SCAF11-214ENST00000550893 RGMAQ96B86 450 aa5.26□□□□□ -1.57
SCAF11-214ENST00000550893 HSPBAP1Q96EW2 488 aa5.26□□□□□ -1.57
SCAF11-214ENST00000550893 SCLT1Q96NL6 688 aa5.26□□□□□ -1.57
SCAF11-214ENST00000550893 RPS6KC1Q96S38 1066 aa5.26□□□□□ -1.57
SCAF11-214ENST00000550893 RTP3Q9BQQ7 232 aa5.26□□□□□ -1.57
SCAF11-214ENST00000550893 TLE6Q9H808 572 aa5.26□□□□□ -1.57
SCAF11-214ENST00000550893 MRPS18AQ9NVS2 196 aaKnown RBP5.26□□□□□ -1.57
SCAF11-214ENST00000550893 RLIMQ9NVW2 624 aa5.26□□□□□ -1.57
SCAF11-214ENST00000550893 FBXW11Q9UKB1 542 aa5.26□□□□□ -1.57
SCAF11-214ENST00000550893 NOL7Q9UMY1 257 aaKnown RBP5.26□□□□□ -1.57
SCAF11-214ENST00000550893 SMC3Q9UQE7 1217 aa5.26□□□□□ -1.57
SCAF11-214ENST00000550893 NME7Q9Y5B8 376 aa5.26□□□□□ -1.57
SCAF11-214ENST00000550893 SRPRBQ9Y5M8 271 aaKnown RBP5.26□□□□□ -1.57
SCAF11-214ENST00000550893 STYXL1Q9Y6J8 313 aa5.26□□□□□ -1.57
SCAF11-214ENST00000550893 ARHGEF17Q96PE2 2063 aaPredicted RBP5.25□□□□□ -1.57
SCAF11-214ENST00000550893 ZFHX2Q9C0A1 2572 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms