RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 IPO11Q9UI26 975 aaKnown RBP12.79□□□□□ -0.36
LETMD1-222ENST00000550274 SALL4Q9UJQ4 1053 aa12.79□□□□□ -0.36
LETMD1-222ENST00000550274 FHOD1Q9Y613 1164 aa12.79□□□□□ -0.36
LETMD1-222ENST00000550274 MUSKO15146 869 aa12.78□□□□□ -0.36
LETMD1-222ENST00000550274 TSPAN6O43657 245 aa12.78□□□□□ -0.36
LETMD1-222ENST00000550274 IGFALSP35858 605 aa12.78□□□□□ -0.36
LETMD1-222ENST00000550274 PDX1P52945 283 aa12.78□□□□□ -0.36
LETMD1-222ENST00000550274 BPIFB4P59827 614 aa12.78□□□□□ -0.36
LETMD1-222ENST00000550274 ATP11AP98196 1134 aa12.78□□□□□ -0.36
LETMD1-222ENST00000550274 SGCGQ13326 291 aa12.78□□□□□ -0.36
LETMD1-222ENST00000550274 C1orf61Q13536 156 aa12.78□□□□□ -0.36
LETMD1-222ENST00000550274 LY6DQ14210 128 aa12.78□□□□□ -0.36
LETMD1-222ENST00000550274 MAN2A1Q16706 1144 aa12.78□□□□□ -0.36
LETMD1-222ENST00000550274 ZNF805Q5CZA5 627 aa12.78□□□□□ -0.36
LETMD1-222ENST00000550274 LRRC73Q5JTD7 316 aa12.78□□□□□ -0.36
LETMD1-222ENST00000550274 MIIPQ5JXC2 388 aa12.78□□□□□ -0.36
LETMD1-222ENST00000550274 MANEALQ5VSG8 457 aa12.78□□□□□ -0.36
LETMD1-222ENST00000550274 LEKR1Q6ZMV7 388 aa12.78□□□□□ -0.36
LETMD1-222ENST00000550274 RBM44Q6ZP01 1051 aaKnown RBP12.78□□□□□ -0.36
LETMD1-222ENST00000550274 NOP9Q86U38 636 aaKnown RBP12.78□□□□□ -0.36
LETMD1-222ENST00000550274 SLC35F3Q8IY50 421 aa12.78□□□□□ -0.36
LETMD1-222ENST00000550274 RYBPQ8N488 228 aaPredicted RBP12.78□□□□□ -0.36
LETMD1-222ENST00000550274 DENND6BQ8NEG7 585 aa12.78□□□□□ -0.36
LETMD1-222ENST00000550274 SNRNP27Q8WVK2 155 aaKnown RBP12.78□□□□□ -0.36
LETMD1-222ENST00000550274 TTC9Q92623 222 aa12.78□□□□□ -0.36
LETMD1-222ENST00000550274 ARHGEF2Q92974 986 aaKnown RBP12.78□□□□□ -0.36
LETMD1-222ENST00000550274 RAB7BQ96AH8 199 aa12.78□□□□□ -0.36
LETMD1-222ENST00000550274 ISG20Q96AZ6 181 aaKnown RBP12.78□□□□□ -0.36
LETMD1-222ENST00000550274 SLC46A1Q96NT5 459 aa12.78□□□□□ -0.36
LETMD1-222ENST00000550274 IL12RB2Q99665 862 aa12.78□□□□□ -0.36
LETMD1-222ENST00000550274 LRRC61Q9BV99 259 aa12.78□□□□□ -0.36
LETMD1-222ENST00000550274 BOCQ9BWV1 1114 aa12.78□□□□□ -0.36
LETMD1-222ENST00000550274 MAGEB5Q9BZ81 275 aa12.78□□□□□ -0.36
LETMD1-222ENST00000550274 DPH1Q9BZG8 443 aa12.78□□□□□ -0.36
LETMD1-222ENST00000550274 METTL5Q9NRN9 209 aaKnown RBP12.78□□□□□ -0.36
LETMD1-222ENST00000550274 PPARGC1AQ9UBK2 798 aaKnown RBP12.78□□□□□ -0.36
LETMD1-222ENST00000550274 APOBEC3BQ9UH17 382 aaKnown RBP12.78□□□□□ -0.36
LETMD1-222ENST00000550274 NEU3Q9UQ49 428 aa12.78□□□□□ -0.36
LETMD1-222ENST00000550274 FAM72CH0Y354 149 aa12.77□□□□□ -0.37
LETMD1-222ENST00000550274 KRIT1O00522 736 aa12.77□□□□□ -0.37
LETMD1-222ENST00000550274 NEMP1O14524 444 aa12.77□□□□□ -0.37
LETMD1-222ENST00000550274 TPP1O14773 563 aa12.77□□□□□ -0.37
LETMD1-222ENST00000550274 UGT2B4P06133 528 aa12.77□□□□□ -0.37
LETMD1-222ENST00000550274 MMEP08473 750 aa12.77□□□□□ -0.37
LETMD1-222ENST00000550274 RBMS1P29558 406 aaKnown RBP12.77□□□□□ -0.37
LETMD1-222ENST00000550274 NOMO3P69849 1222 aa12.77□□□□□ -0.37
LETMD1-222ENST00000550274 VAC14Q08AM6 782 aa12.77□□□□□ -0.37
LETMD1-222ENST00000550274 BECN1Q14457 450 aa12.77□□□□□ -0.37
LETMD1-222ENST00000550274 NR0B2Q15466 257 aa12.77□□□□□ -0.37
LETMD1-222ENST00000550274 CDO1Q16878 200 aa12.77□□□□□ -0.37
LETMD1-222ENST00000550274 C15orf59Q2T9L4 293 aaPredicted RBP12.77□□□□□ -0.37
LETMD1-222ENST00000550274 HSP90AA4PQ58FG1 418 aa12.77□□□□□ -0.37
LETMD1-222ENST00000550274 PRRT3Q5FWE3 981 aa12.77□□□□□ -0.37
LETMD1-222ENST00000550274 FAM72AQ5TYM5 149 aa12.77□□□□□ -0.37
LETMD1-222ENST00000550274 NAA35Q5VZE5 725 aa12.77□□□□□ -0.37
LETMD1-222ENST00000550274 FAM72DQ6L9T8 149 aa12.77□□□□□ -0.37
LETMD1-222ENST00000550274 VPS36Q86VN1 386 aa12.77□□□□□ -0.37
LETMD1-222ENST00000550274 ZSCAN30Q86W11 494 aa12.77□□□□□ -0.37
LETMD1-222ENST00000550274 NLRP14Q86W24 1093 aa12.77□□□□□ -0.37
LETMD1-222ENST00000550274 FAM72BQ86X60 149 aa12.77□□□□□ -0.37
LETMD1-222ENST00000550274 PLPP6Q8IY26 295 aa12.77□□□□□ -0.37
LETMD1-222ENST00000550274 PHACTR4Q8IZ21 702 aa12.77□□□□□ -0.37
LETMD1-222ENST00000550274 OR2AP1Q8NGE2 309 aa12.77□□□□□ -0.37
LETMD1-222ENST00000550274 ASB12Q8WXK4 309 aa12.77□□□□□ -0.37
LETMD1-222ENST00000550274 CPA5Q8WXQ8 436 aa12.77□□□□□ -0.37
LETMD1-222ENST00000550274 CENPTQ96BT3 561 aa12.77□□□□□ -0.37
LETMD1-222ENST00000550274 WBP1Q96G27 269 aa12.77□□□□□ -0.37
LETMD1-222ENST00000550274 MS4A3Q96HJ5 214 aa12.77□□□□□ -0.37
LETMD1-222ENST00000550274 KLHL32Q96NJ5 620 aa12.77□□□□□ -0.37
LETMD1-222ENST00000550274 NAA15Q9BXJ9 866 aaKnown RBP12.77□□□□□ -0.37
LETMD1-222ENST00000550274 NDST4Q9H3R1 872 aa12.77□□□□□ -0.37
LETMD1-222ENST00000550274 NCKIPSDQ9NZQ3 722 aa12.77□□□□□ -0.37
LETMD1-222ENST00000550274 SPASTQ9UBP0 616 aa12.77□□□□□ -0.37
LETMD1-222ENST00000550274 DNAI1Q9UI46 699 aa12.77□□□□□ -0.37
LETMD1-222ENST00000550274 PCDHGA8Q9Y5G5 932 aa12.77□□□□□ -0.37
LETMD1-222ENST00000550274 SPTA1P02549 2419 aa12.76□□□□□ -0.37
LETMD1-222ENST00000550274 CDRT15L2A8MXV6 281 aa12.76□□□□□ -0.37
LETMD1-222ENST00000550274 J3QKU1 62 aa12.76□□□□□ -0.37
LETMD1-222ENST00000550274 AREL1O15033 823 aa12.76□□□□□ -0.37
LETMD1-222ENST00000550274 LSM8O95777 96 aaKnown RBP12.76□□□□□ -0.37
LETMD1-222ENST00000550274 GSRP00390 522 aa12.76□□□□□ -0.37
LETMD1-222ENST00000550274 CELA2BP08218 269 aaPredicted RBP12.76□□□□□ -0.37
LETMD1-222ENST00000550274 PRKCSHP14314 528 aaPredicted RBP12.76□□□□□ -0.37
LETMD1-222ENST00000550274 ITIH2P19823 946 aa12.76□□□□□ -0.37
LETMD1-222ENST00000550274 THOP1P52888 689 aa12.76□□□□□ -0.37
LETMD1-222ENST00000550274 ADKP55263 362 aaKnown RBP12.76□□□□□ -0.37
LETMD1-222ENST00000550274 NRG1Q02297 640 aaPredicted RBP12.76□□□□□ -0.37
LETMD1-222ENST00000550274 VWA3BQ502W6 1294 aa12.76□□□□□ -0.37
LETMD1-222ENST00000550274 C6orf132Q5T0Z8 1188 aa12.76□□□□□ -0.37
LETMD1-222ENST00000550274 ATXN7L2Q5T6C5 722 aaPredicted RBP12.76□□□□□ -0.37
LETMD1-222ENST00000550274 KLHDC7AQ5VTJ3 777 aa12.76□□□□□ -0.37
LETMD1-222ENST00000550274 KIAA1614Q5VZ46 1190 aa12.76□□□□□ -0.37
LETMD1-222ENST00000550274 RWDD4Q6NW29 188 aaKnown RBP12.76□□□□□ -0.37
LETMD1-222ENST00000550274 FOXR1Q6PIV2 292 aa12.76□□□□□ -0.37
LETMD1-222ENST00000550274 ARCQ7LC44 396 aa12.76□□□□□ -0.37
LETMD1-222ENST00000550274 NETO2Q8NC67 525 aa12.76□□□□□ -0.37
LETMD1-222ENST00000550274 EPS8L1Q8TE68 723 aa12.76□□□□□ -0.37
LETMD1-222ENST00000550274 BTN2A2Q8WVV5 523 aa12.76□□□□□ -0.37
LETMD1-222ENST00000550274 GRAMD1AQ96CP6 724 aa12.76□□□□□ -0.37
LETMD1-222ENST00000550274 CLPBQ9H078 707 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms