RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 CPEB1Q9BZB8 566 aaKnown RBP16.03■□□□□ 0.16
TRAFD1-203ENST00000547063 TM6SF2Q9BZW4 377 aa16.03■□□□□ 0.16
TRAFD1-203ENST00000547063 PHACTR1Q9C0D0 580 aa16.03■□□□□ 0.16
TRAFD1-203ENST00000547063 ATP13A3Q9H7F0 1226 aa16.03■□□□□ 0.16
TRAFD1-203ENST00000547063 NOD2Q9HC29 1040 aa16.03■□□□□ 0.16
TRAFD1-203ENST00000547063 FBXL21Q9UKT6 434 aa16.03■□□□□ 0.16
TRAFD1-203ENST00000547063 A0A1W2PQ67 120 aa16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 TTC34A8MYJ7 566 aa16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 F5H423 210 aaPredicted RBP16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 K7EQS6 105 aa16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 ALOX15BO15296 676 aa16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 SOCS5O75159 536 aa16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 PMPCBO75439 489 aa16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 ZNF821O75541 412 aaPredicted RBP16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 MT-CYBP00156 380 aaPredicted RBP16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 SERPINA4P29622 427 aa16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 RGRP47804 291 aa16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 CARSP49589 748 aaKnown RBP16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 ARL4CP56559 192 aa16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 WNT3AP56704 352 aa16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 MRPS21P82921 87 aaKnown RBP16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 BCL2L1Q07817 233 aa16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 MYLK3Q32MK0 819 aa16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 FSTL4Q6MZW2 842 aa16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 NCEH1Q6PIU2 408 aa16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 PDIK1LQ8N165 341 aa16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 ZCCHC9Q8N567 271 aaKnown RBP16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 FBXO25Q8TCJ0 367 aa16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 IFT43Q96FT9 208 aa16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 OXNAD1Q96HP4 312 aaPredicted RBP16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 FEM1CQ96JP0 617 aa16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 EXOC2Q96KP1 924 aa16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 NELL2Q99435 816 aa16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 GORASP1Q9BQQ3 440 aa16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 HEPHQ9BQS7 1158 aa16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 MLPHQ9BV36 600 aaPredicted RBP16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 EPC1Q9H2F5 836 aa16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 TNKS2Q9H2K2 1166 aa16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 TMEM245Q9H330 911 aa16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 FBRSL1Q9HCM7 1045 aaKnown RBP16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 ARHGEF3Q9NR81 526 aa16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 ZDHHC18Q9NUE0 388 aa16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 ARGLU1Q9NWB6 273 aaPredicted RBP16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 HECAQ9UBI9 543 aaPredicted RBP16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 NFU1Q9UMS0 254 aa16.02■□□□□ 0.16
TRAFD1-203ENST00000547063 F5P12259 2224 aa16.02■□□□□ 0.15
TRAFD1-203ENST00000547063 MUC22E2RYF6 1773 aaPredicted RBP16.01■□□□□ 0.15
TRAFD1-203ENST00000547063 UQCRHLA0A096LP55 91 aa16.01■□□□□ 0.15
TRAFD1-203ENST00000547063 WASH3PC4AMC7 463 aa16.01■□□□□ 0.15
TRAFD1-203ENST00000547063 PPFIA2O75334 1257 aa16.01■□□□□ 0.15
TRAFD1-203ENST00000547063 UQCRHP07919 91 aa16.01■□□□□ 0.15
TRAFD1-203ENST00000547063 MMP2P08253 660 aa16.01■□□□□ 0.15
TRAFD1-203ENST00000547063 KIR2DL1P43626 348 aaPredicted RBP16.01■□□□□ 0.15
TRAFD1-203ENST00000547063 CCNHP51946 323 aaPredicted RBP16.01■□□□□ 0.15
TRAFD1-203ENST00000547063 RPL26P61254 145 aaKnown RBP16.01■□□□□ 0.15
TRAFD1-203ENST00000547063 VSNL1P62760 191 aa16.01■□□□□ 0.15
TRAFD1-203ENST00000547063 CDK18Q07002 472 aa16.01■□□□□ 0.15
TRAFD1-203ENST00000547063 CDH17Q12864 832 aa16.01■□□□□ 0.15
TRAFD1-203ENST00000547063 ENPP2Q13822 863 aa16.01■□□□□ 0.15
TRAFD1-203ENST00000547063 NAA30Q147X3 362 aaPredicted RBP16.01■□□□□ 0.15
TRAFD1-203ENST00000547063 BRD3Q15059 726 aa16.01■□□□□ 0.15
TRAFD1-203ENST00000547063 TRADDQ15628 312 aa16.01■□□□□ 0.15
TRAFD1-203ENST00000547063 ATXN7L2Q5T6C5 722 aaPredicted RBP16.01■□□□□ 0.15
TRAFD1-203ENST00000547063 EGFLAMQ63HQ2 1017 aa16.01■□□□□ 0.15
TRAFD1-203ENST00000547063 KDELC1Q6UW63 502 aa16.01■□□□□ 0.15
TRAFD1-203ENST00000547063 ZDHHC24Q6UX98 284 aa16.01■□□□□ 0.15
TRAFD1-203ENST00000547063 Q6ZVU0 165 aa16.01■□□□□ 0.15
TRAFD1-203ENST00000547063 CENPUQ71F23 418 aa16.01■□□□□ 0.15
TRAFD1-203ENST00000547063 DSG4Q86SJ6 1040 aa16.01■□□□□ 0.15
TRAFD1-203ENST00000547063 CHPFQ8IZ52 775 aa16.01■□□□□ 0.15
TRAFD1-203ENST00000547063 GJD3Q8N144 294 aa16.01■□□□□ 0.15
TRAFD1-203ENST00000547063 SYNPOQ8N3V7 929 aa16.01■□□□□ 0.15
TRAFD1-203ENST00000547063 IPMKQ8NFU5 416 aa16.01■□□□□ 0.15
TRAFD1-203ENST00000547063 OR2A12Q8NGT7 310 aa16.01■□□□□ 0.15
TRAFD1-203ENST00000547063 ZNF641Q96N77 438 aaPredicted RBP16.01■□□□□ 0.15
TRAFD1-203ENST00000547063 TBL1YQ9BQ87 522 aa16.01■□□□□ 0.15
TRAFD1-203ENST00000547063 OSBPL1AQ9BXW6 950 aa16.01■□□□□ 0.15
TRAFD1-203ENST00000547063 ADGRE3Q9BY15 652 aa16.01■□□□□ 0.15
TRAFD1-203ENST00000547063 UBP1Q9NZI7 540 aa16.01■□□□□ 0.15
TRAFD1-203ENST00000547063 EVLQ9UI08 416 aaPredicted RBP16.01■□□□□ 0.15
TRAFD1-203ENST00000547063 RPL26L1Q9UNX3 145 aaKnown RBP16.01■□□□□ 0.15
TRAFD1-203ENST00000547063 CCDC151A5D8V7 595 aa16■□□□□ 0.15
TRAFD1-203ENST00000547063 EIF3HO15372 352 aaKnown RBP eCLIP16■□□□□ 0.15
TRAFD1-203ENST00000547063 BNIP3LO60238 219 aa16■□□□□ 0.15
TRAFD1-203ENST00000547063 SYNCRIPO60506 623 aaKnown RBP16■□□□□ 0.15
TRAFD1-203ENST00000547063 TMEM63AO94886 807 aa16■□□□□ 0.15
TRAFD1-203ENST00000547063 EGFP01133 1207 aa16■□□□□ 0.15
TRAFD1-203ENST00000547063 PRNPP04156 253 aa16■□□□□ 0.15
TRAFD1-203ENST00000547063 EPHX1P07099 455 aa16■□□□□ 0.15
TRAFD1-203ENST00000547063 HLA-DPA1P20036 260 aa16■□□□□ 0.15
TRAFD1-203ENST00000547063 NTSR1P30989 418 aa16■□□□□ 0.15
TRAFD1-203ENST00000547063 LRRC32Q14392 662 aa16■□□□□ 0.15
TRAFD1-203ENST00000547063 ELAVL3Q14576 367 aaKnown RBP16■□□□□ 0.15
TRAFD1-203ENST00000547063 PCSK7Q16549 785 aa16■□□□□ 0.15
TRAFD1-203ENST00000547063 HIF1AQ16665 826 aa16■□□□□ 0.15
TRAFD1-203ENST00000547063 KCTD19Q17RG1 926 aaPredicted RBP16■□□□□ 0.15
TRAFD1-203ENST00000547063 DNAJC21Q5F1R6 531 aaKnown RBP16■□□□□ 0.15
TRAFD1-203ENST00000547063 ANKRD22Q5VYY1 191 aa16■□□□□ 0.15
TRAFD1-203ENST00000547063 ARMC3Q5W041 872 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms