RNA–Protein interactions for RNA: ENST00000546102.1

CUL3-215, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-215ENST00000546102 C8orf76Q96K31 380 aa3.71□□□□□ -1.82
CUL3-215ENST00000546102 SPATA17Q96L03 361 aa3.71□□□□□ -1.82
CUL3-215ENST00000546102 ZNF512Q96ME7 567 aaPredicted RBP3.71□□□□□ -1.82
CUL3-215ENST00000546102 LENG8Q96PV6 779 aaPredicted RBP3.71□□□□□ -1.82
CUL3-215ENST00000546102 HAPLN3Q96S86 360 aa3.71□□□□□ -1.82
CUL3-215ENST00000546102 CPPED1Q9BRF8 314 aaPredicted RBP3.71□□□□□ -1.82
CUL3-215ENST00000546102 PAAF1Q9BRP4 392 aa3.71□□□□□ -1.82
CUL3-215ENST00000546102 IDI2Q9BXS1 227 aa3.71□□□□□ -1.82
CUL3-215ENST00000546102 RETREG1Q9H6L5 497 aa3.71□□□□□ -1.82
CUL3-215ENST00000546102 ZWILCHQ9H900 591 aa3.71□□□□□ -1.82
CUL3-215ENST00000546102 ERVK-5Q9HDB9 667 aa3.71□□□□□ -1.82
CUL3-215ENST00000546102 SEMA4BQ9NPR2 832 aaPredicted RBP3.71□□□□□ -1.82
CUL3-215ENST00000546102 TCP11L1Q9NUJ3 509 aa3.71□□□□□ -1.82
CUL3-215ENST00000546102 ALKBH4Q9NXW9 302 aa3.71□□□□□ -1.82
CUL3-215ENST00000546102 SLC25A10Q9UBX3 287 aaPredicted RBP3.71□□□□□ -1.82
CUL3-215ENST00000546102 ADAM29Q9UKF5 820 aa3.71□□□□□ -1.82
CUL3-215ENST00000546102 MTMR6Q9Y217 621 aa3.71□□□□□ -1.82
CUL3-215ENST00000546102 FRMD4BQ9Y2L6 1034 aa3.71□□□□□ -1.82
CUL3-215ENST00000546102 NEU2Q9Y3R4 380 aa3.71□□□□□ -1.82
CUL3-215ENST00000546102 SNX5Q9Y5X3 404 aa3.71□□□□□ -1.82
CUL3-215ENST00000546102 LYVE1Q9Y5Y7 322 aa3.71□□□□□ -1.82
CUL3-215ENST00000546102 COL4A5P29400 1685 aa3.71□□□□□ -1.82
CUL3-215ENST00000546102 PASKQ96RG2 1323 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 KDM3AQ9Y4C1 1321 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 MYH15Q9Y2K3 1946 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 GXYLT2A0PJZ3 443 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 GOLGA6L4A6NEF3 574 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 SYN3O14994 580 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 TGFB1I1O43294 461 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 HNRNPRO43390 633 aaKnown RBP3.7□□□□□ -1.82
CUL3-215ENST00000546102 TNFSF14O43557 240 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 PPFIA2O75334 1257 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 RAD17O75943 681 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 SUN1O94901 812 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 ZNF202O95125 648 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 DEXIO95424 95 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 CTDNEP1O95476 244 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 NR2F1P10589 423 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 TOP1P11387 765 aaKnown RBP3.7□□□□□ -1.82
CUL3-215ENST00000546102 CHN1P15882 459 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 IFNAR1P17181 557 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 GCSHP23434 173 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 EPHA3P29320 983 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 GCH1P30793 250 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 ICAM3P32942 547 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 PPARGP37231 505 aaPredicted RBP3.7□□□□□ -1.82
CUL3-215ENST00000546102 EIF2DP41214 584 aaKnown RBP3.7□□□□□ -1.82
CUL3-215ENST00000546102 TNNT3P45378 269 aaPredicted RBP3.7□□□□□ -1.82
CUL3-215ENST00000546102 GNAQP50148 359 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 PLCD1P51178 756 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 PSMC6P62333 389 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 TIAL1Q01085 375 aaKnown RBP eCLIP3.7□□□□□ -1.82
CUL3-215ENST00000546102 TFAP4Q01664 338 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 EPS8Q12929 822 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 BFSP2Q13515 415 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 PRPF4BQ13523 1007 aaKnown RBP3.7□□□□□ -1.82
CUL3-215ENST00000546102 NFYCQ13952 458 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 NAA25Q14CX7 972 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 ACOX1Q15067 660 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 AAK1Q2M2I8 961 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 KLHL40Q2TBA0 621 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 UBAP2Q5T6F2 1119 aaKnown RBP3.7□□□□□ -1.82
CUL3-215ENST00000546102 DEPDC1Q5TB30 811 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 FKBP1CQ5VVH2 108 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 APOBEC3HQ6NTF7 200 aaKnown RBP3.7□□□□□ -1.82
CUL3-215ENST00000546102 CCDC144NLQ6NUI1 221 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 FAM111BQ6SJ93 734 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 RAB11FIP4Q86YS3 637 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 METTL25Q8N6Q8 603 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 FRMD1Q8N878 549 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 SCFD2Q8WU76 684 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 NCSTNQ92542 709 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 JAKMIP2Q96AA8 810 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 ARRDC3Q96B67 414 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 SH3KBP1Q96B97 665 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 PERPQ96FX8 193 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 CCDC17Q96LX7 622 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 ZNF396Q96N95 335 aaPredicted RBP3.7□□□□□ -1.82
CUL3-215ENST00000546102 LRRC37BQ96QE4 947 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 NR1H4Q96RI1 486 aaPredicted RBP3.7□□□□□ -1.82
CUL3-215ENST00000546102 PNKPQ96T60 521 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 PIP5K1AQ99755 562 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 LBHD1Q9BQE6 289 aaPredicted RBP3.7□□□□□ -1.82
CUL3-215ENST00000546102 LZTS2Q9BRK4 669 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 RNF26Q9BY78 433 aaPredicted RBP3.7□□□□□ -1.82
CUL3-215ENST00000546102 CLPBQ9H078 707 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 MEGF9Q9H1U4 602 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 OR10A4Q9H209 315 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 C12orf65Q9H3J6 166 aaKnown RBP3.7□□□□□ -1.82
CUL3-215ENST00000546102 SERHL2Q9H4I8 314 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 AGO3Q9H9G7 860 aaKnown RBP3.7□□□□□ -1.82
CUL3-215ENST00000546102 GRPEL1Q9HAV7 217 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 FBXO28Q9NVF7 368 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 BEX4Q9NWD9 120 aaPredicted RBP3.7□□□□□ -1.82
CUL3-215ENST00000546102 PPP1R14DQ9NXH3 145 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 CTTNBP2NLQ9P2B4 639 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 HSFX1Q9UBD0 423 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 SEC63Q9UGP8 760 aaKnown RBP3.7□□□□□ -1.82
CUL3-215ENST00000546102 SERTAD3Q9UJW9 196 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 CFAP45Q9UL16 551 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms