RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 IQCB1Q15051 598 aa21.43■■□□□ 1.02
SCARB1-210ENST00000545493 MYLK3Q32MK0 819 aa21.43■■□□□ 1.02
SCARB1-210ENST00000545493 PARP15Q460N3 678 aa21.43■■□□□ 1.02
SCARB1-210ENST00000545493 LRRC73Q5JTD7 316 aa21.43■■□□□ 1.02
SCARB1-210ENST00000545493 PPP1R2P3Q6NXS1 205 aa21.43■■□□□ 1.02
SCARB1-210ENST00000545493 KDM7AQ6ZMT4 941 aa21.43■■□□□ 1.02
SCARB1-210ENST00000545493 UMODL1-AS1Q8N2C9 162 aa21.43■■□□□ 1.02
SCARB1-210ENST00000545493 SLC25A45Q8N413 288 aa21.43■■□□□ 1.02
SCARB1-210ENST00000545493 CASKIN2Q8WXE0 1202 aa21.43■■□□□ 1.02
SCARB1-210ENST00000545493 RAB7BQ96AH8 199 aa21.43■■□□□ 1.02
SCARB1-210ENST00000545493 KLHL32Q96NJ5 620 aa21.43■■□□□ 1.02
SCARB1-210ENST00000545493 KLF6Q99612 283 aaPredicted RBP21.43■■□□□ 1.02
SCARB1-210ENST00000545493 TRIM7Q9C029 511 aa21.43■■□□□ 1.02
SCARB1-210ENST00000545493 LRRC19Q9H756 370 aa21.43■■□□□ 1.02
SCARB1-210ENST00000545493 PDFQ9HBH1 243 aa21.43■■□□□ 1.02
SCARB1-210ENST00000545493 PARVAQ9NVD7 372 aa21.43■■□□□ 1.02
SCARB1-210ENST00000545493 LHX3Q9UBR4 397 aa21.43■■□□□ 1.02
SCARB1-210ENST00000545493 AREL1O15033 823 aa21.42■■□□□ 1.02
SCARB1-210ENST00000545493 PIAS2O75928 621 aa21.42■■□□□ 1.02
SCARB1-210ENST00000545493 IGSF6O95976 241 aa21.42■■□□□ 1.02
SCARB1-210ENST00000545493 PAK4O96013 591 aaPredicted RBP21.42■■□□□ 1.02
SCARB1-210ENST00000545493 GIMD1P0DJR0 217 aa21.42■■□□□ 1.02
SCARB1-210ENST00000545493 DGKAP23743 735 aa21.42■■□□□ 1.02
SCARB1-210ENST00000545493 YBEYP58557 167 aaPredicted RBP21.42■■□□□ 1.02
SCARB1-210ENST00000545493 RHOAP61586 193 aa21.42■■□□□ 1.02
SCARB1-210ENST00000545493 GOLGA4Q13439 2230 aaKnown RBP21.42■■□□□ 1.02
SCARB1-210ENST00000545493 FILIP1LQ4L180 1135 aa21.42■■□□□ 1.02
SCARB1-210ENST00000545493 INO80DQ53TQ3 878 aaPredicted RBP21.42■■□□□ 1.02
SCARB1-210ENST00000545493 TPRG1LQ5T0D9 272 aa21.42■■□□□ 1.02
SCARB1-210ENST00000545493 Q6ZSR6 202 aa21.42■■□□□ 1.02
SCARB1-210ENST00000545493 CYP4V2Q6ZWL3 525 aaPredicted RBP21.42■■□□□ 1.02
SCARB1-210ENST00000545493 ZSCAN30Q86W11 494 aa21.42■■□□□ 1.02
SCARB1-210ENST00000545493 TMPRSS12Q86WS5 348 aa21.42■■□□□ 1.02
SCARB1-210ENST00000545493 FEM1CQ96JP0 617 aa21.42■■□□□ 1.02
SCARB1-210ENST00000545493 EXOC2Q96KP1 924 aa21.42■■□□□ 1.02
SCARB1-210ENST00000545493 KCTD15Q96SI1 283 aaPredicted RBP21.42■■□□□ 1.02
SCARB1-210ENST00000545493 SNRNP25Q9BV90 132 aaKnown RBP21.42■■□□□ 1.02
SCARB1-210ENST00000545493 AIPL1Q9NZN9 384 aa21.42■■□□□ 1.02
SCARB1-210ENST00000545493 HS3ST3A1Q9Y663 406 aa21.42■■□□□ 1.02
SCARB1-210ENST00000545493 IGLON5A6NGN9 336 aa21.41■■□□□ 1.02
SCARB1-210ENST00000545493 DDX3XO00571 662 aaKnown RBP eCLIP21.41■■□□□ 1.023e-8■■■■□ 25.9
SCARB1-210ENST00000545493 INSIG1O15503 277 aa21.41■■□□□ 1.02
SCARB1-210ENST00000545493 TSPAN6O43657 245 aa21.41■■□□□ 1.02
SCARB1-210ENST00000545493 SIGLEC6O43699 453 aa21.41■■□□□ 1.02
SCARB1-210ENST00000545493 POP4O95707 220 aaKnown RBP21.41■■□□□ 1.02
SCARB1-210ENST00000545493 C1SP09871 688 aa21.41■■□□□ 1.02
SCARB1-210ENST00000545493 HTR7P34969 479 aa21.41■■□□□ 1.02
SCARB1-210ENST00000545493 HES3Q5TGS1 186 aa21.41■■□□□ 1.02
SCARB1-210ENST00000545493 GDPD4Q6W3E5 623 aa21.41■■□□□ 1.02
SCARB1-210ENST00000545493 OR4C6Q8NH72 309 aa21.41■■□□□ 1.02
SCARB1-210ENST00000545493 CELF6Q96J87 481 aaKnown RBP21.41■■□□□ 1.02
SCARB1-210ENST00000545493 C1QTNF2Q9BXJ5 285 aa21.41■■□□□ 1.02
SCARB1-210ENST00000545493 DKK4Q9UBT3 224 aa21.41■■□□□ 1.02
SCARB1-210ENST00000545493 TDRD6O60522 2096 aaKnown RBP21.4■■□□□ 1.02
SCARB1-210ENST00000545493 TRABD2BA6NFA1 517 aa21.4■■□□□ 1.02
SCARB1-210ENST00000545493 TMEM191CA6NGB0 347 aa21.4■■□□□ 1.02
SCARB1-210ENST00000545493 FFAR2O15552 330 aa21.4■■□□□ 1.02
SCARB1-210ENST00000545493 PIGNO95427 931 aa21.4■■□□□ 1.02
SCARB1-210ENST00000545493 CKMT2P17540 419 aa21.4■■□□□ 1.02
SCARB1-210ENST00000545493 DESP17661 470 aa21.4■■□□□ 1.02
SCARB1-210ENST00000545493 ACP1P24666 158 aa21.4■■□□□ 1.02
SCARB1-210ENST00000545493 FZD2Q14332 565 aa21.4■■□□□ 1.02
SCARB1-210ENST00000545493 CYTH1Q15438 398 aa21.4■■□□□ 1.02
SCARB1-210ENST00000545493 ZNF542PQ5EBM4 170 aa21.4■■□□□ 1.02
SCARB1-210ENST00000545493 DENND6BQ8NEG7 585 aa21.4■■□□□ 1.02
SCARB1-210ENST00000545493 FAM174AQ8TBP5 190 aa21.4■■□□□ 1.02
SCARB1-210ENST00000545493 ZNF653Q96CK0 615 aa21.4■■□□□ 1.02
SCARB1-210ENST00000545493 IFT43Q96FT9 208 aa21.4■■□□□ 1.02
SCARB1-210ENST00000545493 LENG8Q96PV6 779 aaPredicted RBP21.4■■□□□ 1.02
SCARB1-210ENST00000545493 DHX35Q9H5Z1 703 aaKnown RBP21.4■■□□□ 1.02
SCARB1-210ENST00000545493 UBA2Q9UBT2 640 aaPredicted RBP21.4■■□□□ 1.02
SCARB1-210ENST00000545493 CNOT8Q9UFF9 292 aaKnown RBP21.4■■□□□ 1.02
SCARB1-210ENST00000545493 RAXQ9Y2V3 346 aa21.4■■□□□ 1.02
SCARB1-210ENST00000545493 MFHAS1Q9Y4C4 1052 aa21.4■■□□□ 1.02
SCARB1-210ENST00000545493 LRRK1Q38SD2 2015 aa21.39■■□□□ 1.02
SCARB1-210ENST00000545493 J3KR12 359 aa21.39■■□□□ 1.01
SCARB1-210ENST00000545493 EEF2KO00418 725 aaKnown RBP21.39■■□□□ 1.01
SCARB1-210ENST00000545493 GZMAP12544 262 aa21.39■■□□□ 1.01
SCARB1-210ENST00000545493 ITIH2P19823 946 aa21.39■■□□□ 1.01
SCARB1-210ENST00000545493 IGFALSP35858 605 aa21.39■■□□□ 1.01
SCARB1-210ENST00000545493 RABIFP47224 123 aa21.39■■□□□ 1.01
SCARB1-210ENST00000545493 ZNF211Q13398 564 aaPredicted RBP21.39■■□□□ 1.01
SCARB1-210ENST00000545493 ILKQ13418 452 aa21.39■■□□□ 1.01
SCARB1-210ENST00000545493 NR1I3Q14994 352 aa21.39■■□□□ 1.01
SCARB1-210ENST00000545493 PARGQ86W56 976 aa21.39■■□□□ 1.01
SCARB1-210ENST00000545493 FNIP1Q8TF40 1166 aa21.39■■□□□ 1.01
SCARB1-210ENST00000545493 DNAJC28Q9NX36 388 aa21.39■■□□□ 1.01
SCARB1-210ENST00000545493 PCSK1NQ9UHG2 260 aa21.39■■□□□ 1.01
SCARB1-210ENST00000545493 GPSM3Q9Y4H4 160 aa21.39■■□□□ 1.01
SCARB1-210ENST00000545493 ACACAQ13085 2346 aa21.39■■□□□ 1.01
SCARB1-210ENST00000545493 MYLKQ15746 1914 aa21.39■■□□□ 1.01
SCARB1-210ENST00000545493 ANKRD36A6QL64 1941 aa21.38■■□□□ 1.01
SCARB1-210ENST00000545493 SPTY2D1-AS1A0A0U1RR47 76 aa21.38■■□□□ 1.01
SCARB1-210ENST00000545493 NEMP1O14524 444 aa21.38■■□□□ 1.01
SCARB1-210ENST00000545493 FPGTO14772 594 aa21.38■■□□□ 1.01
SCARB1-210ENST00000545493 LRCH4O75427 683 aa21.38■■□□□ 1.01
SCARB1-210ENST00000545493 FTLP02792 175 aaPredicted RBP21.38■■□□□ 1.01
SCARB1-210ENST00000545493 CDK4P11802 303 aa21.38■■□□□ 1.01
SCARB1-210ENST00000545493 SKILP12757 684 aa21.38■■□□□ 1.01
SCARB1-210ENST00000545493 MIPP30301 263 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms