RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 ARHGEF26Q96DR7 871 aa9.15□□□□□ -0.94
LMO3-222ENST00000540445 HMCESQ96FZ2 354 aa9.15□□□□□ -0.94
LMO3-222ENST00000540445 GDAP1L1Q96MZ0 367 aa9.15□□□□□ -0.94
LMO3-222ENST00000540445 NCAPGQ9BPX3 1015 aa9.15□□□□□ -0.94
LMO3-222ENST00000540445 OSBPL1AQ9BXW6 950 aa9.15□□□□□ -0.94
LMO3-222ENST00000540445 EDEM3Q9BZQ6 932 aa9.15□□□□□ -0.94
LMO3-222ENST00000540445 TTYH3Q9C0H2 523 aa9.15□□□□□ -0.94
LMO3-222ENST00000540445 NOL6Q9H6R4 1146 aaKnown RBP9.15□□□□□ -0.94
LMO3-222ENST00000540445 CBX8Q9HC52 389 aa9.15□□□□□ -0.94
LMO3-222ENST00000540445 MRPL47Q9HD33 250 aaKnown RBP9.15□□□□□ -0.94
LMO3-222ENST00000540445 GPATCH2LQ9NWQ4 482 aa9.15□□□□□ -0.94
LMO3-222ENST00000540445 IPO11Q9UI26 975 aaKnown RBP9.15□□□□□ -0.94
LMO3-222ENST00000540445 AP4E1Q9UPM8 1137 aa9.15□□□□□ -0.94
LMO3-222ENST00000540445 FADS3Q9Y5Q0 445 aa9.15□□□□□ -0.94
LMO3-222ENST00000540445 HS3ST3A1Q9Y663 406 aa9.15□□□□□ -0.94
LMO3-222ENST00000540445 CELSR3Q9NYQ7 3312 aa9.15□□□□□ -0.95
LMO3-222ENST00000540445 LOC400499M0QZD8 3231 aa9.14□□□□□ -0.95
LMO3-222ENST00000540445 URB1O60287 2271 aaKnown RBP9.14□□□□□ -0.95
LMO3-222ENST00000540445 FAM149AA5PLN7 773 aa9.14□□□□□ -0.95
LMO3-222ENST00000540445 TMEM191CA6NGB0 347 aa9.14□□□□□ -0.95
LMO3-222ENST00000540445 IGLON5A6NGN9 336 aa9.14□□□□□ -0.95
LMO3-222ENST00000540445 ARHGAP42A6NI28 874 aa9.14□□□□□ -0.95
LMO3-222ENST00000540445 A6NNZ2 444 aa9.14□□□□□ -0.95
LMO3-222ENST00000540445 WASH4PA8MWX3 477 aa9.14□□□□□ -0.95
LMO3-222ENST00000540445 DDX3XO00571 662 aaKnown RBP eCLIP9.14□□□□□ -0.95
LMO3-222ENST00000540445 FPGTO14772 594 aa9.14□□□□□ -0.95
LMO3-222ENST00000540445 AP1G1O43747 822 aa9.14□□□□□ -0.95
LMO3-222ENST00000540445 TMCC1O94876 653 aa9.14□□□□□ -0.95
LMO3-222ENST00000540445 IGSF6O95976 241 aa9.14□□□□□ -0.95
LMO3-222ENST00000540445 JUPP14923 745 aa9.14□□□□□ -0.95
LMO3-222ENST00000540445 SERINC3Q13530 473 aa9.14□□□□□ -0.95
LMO3-222ENST00000540445 KLHL40Q2TBA0 621 aa9.14□□□□□ -0.95
LMO3-222ENST00000540445 INO80DQ53TQ3 878 aaPredicted RBP9.14□□□□□ -0.95
LMO3-222ENST00000540445 TDRD12Q587J7 1177 aaKnown RBP9.14□□□□□ -0.95
LMO3-222ENST00000540445 PPP6R3Q5H9R7 873 aaPredicted RBP9.14□□□□□ -0.95
LMO3-222ENST00000540445 PARS2Q7L3T8 475 aaKnown RBP9.14□□□□□ -0.95
LMO3-222ENST00000540445 PTAR1Q7Z6K3 402 aaPredicted RBP9.14□□□□□ -0.95
LMO3-222ENST00000540445 VPS36Q86VN1 386 aa9.14□□□□□ -0.95
LMO3-222ENST00000540445 MARCH9Q86YJ5 346 aa9.14□□□□□ -0.95
LMO3-222ENST00000540445 DCP2Q8IU60 420 aaKnown RBP9.14□□□□□ -0.95
LMO3-222ENST00000540445 UMODL1-AS1Q8N2C9 162 aa9.14□□□□□ -0.95
LMO3-222ENST00000540445 PAF1Q8N7H5 531 aa9.14□□□□□ -0.95
LMO3-222ENST00000540445 TMEM145Q8NBT3 493 aa9.14□□□□□ -0.95
LMO3-222ENST00000540445 OR13H1Q8NG92 308 aa9.14□□□□□ -0.95
LMO3-222ENST00000540445 FAM174AQ8TBP5 190 aa9.14□□□□□ -0.95
LMO3-222ENST00000540445 TRIM11Q96F44 468 aa9.14□□□□□ -0.95
LMO3-222ENST00000540445 CELF6Q96J87 481 aaKnown RBP9.14□□□□□ -0.95
LMO3-222ENST00000540445 EXOC2Q96KP1 924 aa9.14□□□□□ -0.95
LMO3-222ENST00000540445 SYT11Q9BT88 431 aa9.14□□□□□ -0.95
LMO3-222ENST00000540445 FUCA2Q9BTY2 467 aa9.14□□□□□ -0.95
LMO3-222ENST00000540445 KLC2Q9H0B6 622 aa9.14□□□□□ -0.95
LMO3-222ENST00000540445 CCDC86Q9H6F5 360 aaKnown RBP9.14□□□□□ -0.95
LMO3-222ENST00000540445 DNAJC28Q9NX36 388 aa9.14□□□□□ -0.95
LMO3-222ENST00000540445 UBA2Q9UBT2 640 aaPredicted RBP9.14□□□□□ -0.95
LMO3-222ENST00000540445 RALYQ9UKM9 306 aaKnown RBP9.14□□□□□ -0.95
LMO3-222ENST00000540445 NEU3Q9UQ49 428 aa9.14□□□□□ -0.95
LMO3-222ENST00000540445 BZW2Q9Y6E2 419 aaKnown RBP9.14□□□□□ -0.95
LMO3-222ENST00000540445 SCINQ9Y6U3 715 aa9.14□□□□□ -0.95
LMO3-222ENST00000540445 ZFYVE26Q68DK2 2539 aa9.14□□□□□ -0.95
LMO3-222ENST00000540445 COL27A1Q8IZC6 1860 aaPredicted RBP9.14□□□□□ -0.95
LMO3-222ENST00000540445 POM121BA6NF01 834 aa9.13□□□□□ -0.95
LMO3-222ENST00000540445 NEMP2A6NFY4 417 aa9.13□□□□□ -0.95
LMO3-222ENST00000540445 EIF3CLB5ME19 914 aaKnown RBP9.13□□□□□ -0.95
LMO3-222ENST00000540445 J3KR12 359 aa9.13□□□□□ -0.95
LMO3-222ENST00000540445 DFFAO00273 331 aa9.13□□□□□ -0.95
LMO3-222ENST00000540445 FFAR2O15552 330 aa9.13□□□□□ -0.95
LMO3-222ENST00000540445 MMP20O60882 483 aa9.13□□□□□ -0.95
LMO3-222ENST00000540445 PALMO75781 387 aa9.13□□□□□ -0.95
LMO3-222ENST00000540445 C1SP09871 688 aa9.13□□□□□ -0.95
LMO3-222ENST00000540445 MYBL1P10243 752 aa9.13□□□□□ -0.95
LMO3-222ENST00000540445 CDK4P11802 303 aa9.13□□□□□ -0.95
LMO3-222ENST00000540445 CKMT2P17540 419 aa9.13□□□□□ -0.95
LMO3-222ENST00000540445 DGKAP23743 735 aa9.13□□□□□ -0.95
LMO3-222ENST00000540445 MIPP30301 263 aa9.13□□□□□ -0.95
LMO3-222ENST00000540445 HTR7P34969 479 aa9.13□□□□□ -0.95
LMO3-222ENST00000540445 HNF1BP35680 557 aa9.13□□□□□ -0.95
LMO3-222ENST00000540445 PRKCIP41743 596 aa9.13□□□□□ -0.95
LMO3-222ENST00000540445 PAPOLAP51003 745 aaKnown RBP9.13□□□□□ -0.95
LMO3-222ENST00000540445 NDST2P52849 883 aa9.13□□□□□ -0.95
LMO3-222ENST00000540445 DAB2P98082 770 aa9.13□□□□□ -0.95
LMO3-222ENST00000540445 CAMK2BQ13554 666 aa9.13□□□□□ -0.95
LMO3-222ENST00000540445 FGL2Q14314 439 aa9.13□□□□□ -0.95
LMO3-222ENST00000540445 CYTH1Q15438 398 aa9.13□□□□□ -0.95
LMO3-222ENST00000540445 SMAD1Q15797 465 aaKnown RBP9.13□□□□□ -0.95
LMO3-222ENST00000540445 CA9Q16790 459 aa9.13□□□□□ -0.95
LMO3-222ENST00000540445 TMEM259Q4ZIN3 620 aa9.13□□□□□ -0.95
LMO3-222ENST00000540445 ZNF542PQ5EBM4 170 aa9.13□□□□□ -0.95
LMO3-222ENST00000540445 LRRC73Q5JTD7 316 aa9.13□□□□□ -0.95
LMO3-222ENST00000540445 CFAP58Q5T655 872 aa9.13□□□□□ -0.95
LMO3-222ENST00000540445 E4F1Q66K89 784 aaPredicted RBP9.13□□□□□ -0.95
LMO3-222ENST00000540445 ZSCAN30Q86W11 494 aa9.13□□□□□ -0.95
LMO3-222ENST00000540445 SLC25A45Q8N413 288 aa9.13□□□□□ -0.95
LMO3-222ENST00000540445 CXorf40AQ8TE69 158 aa9.13□□□□□ -0.95
LMO3-222ENST00000540445 BMFQ96LC9 184 aa9.13□□□□□ -0.95
LMO3-222ENST00000540445 EIF3CQ99613 913 aaKnown RBP9.13□□□□□ -0.95
LMO3-222ENST00000540445 SNRNP25Q9BV90 132 aaKnown RBP9.13□□□□□ -0.95
LMO3-222ENST00000540445 TRIM7Q9C029 511 aa9.13□□□□□ -0.95
LMO3-222ENST00000540445 SLC39A8Q9C0K1 460 aa9.13□□□□□ -0.95
LMO3-222ENST00000540445 KLHL11Q9NVR0 708 aa9.13□□□□□ -0.95
LMO3-222ENST00000540445 DKK4Q9UBT3 224 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms