RNA–Protein interactions for RNA: ENST00000539484.1

CCDC144NL-203, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-203ENST00000539484 PRLRP16471 622 aa9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 DGKAP23743 735 aa9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 MTIF2P46199 727 aaKnown RBP9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 SULT1E1P49888 294 aa9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 BPIFB4P59827 614 aa9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 RNASE9P60153 205 aaKnown RBP9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 HNRNPKP61978 463 aaKnown RBP eCLIP9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 SLC6A3Q01959 620 aa9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 DEUP1Q05D60 604 aa9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 EIF4EBP2Q13542 120 aaPredicted RBP9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 TBC1D25Q3MII6 688 aa9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 GJB7Q6PEY0 223 aa9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 ERN2Q76MJ5 926 aaKnown RBP9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 SLC26A9Q7LBE3 791 aa9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 GPR155Q7Z3F1 870 aa9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 TMC6Q7Z403 805 aa9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 PTAR1Q7Z6K3 402 aaPredicted RBP9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 SETD3Q86TU7 594 aaPredicted RBP9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 DCP2Q8IU60 420 aaKnown RBP9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 ZDHHC17Q8IUH5 632 aa9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 LSMEM2Q8N112 164 aa9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 MSANTD4Q8NCY6 345 aa9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 C1orf131Q8NDD1 294 aaKnown RBP9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 TMIEQ8NEW7 156 aa9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 OR4C6Q8NH72 309 aa9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 GRIN3AQ8TCU5 1115 aa9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 RFFLQ8WZ73 363 aa9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 ALG14Q96F25 216 aa9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 PCMTD1Q96MG8 357 aaPredicted RBP9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 DUSP23Q9BVJ7 150 aa9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 SSBP4Q9BWG4 385 aaPredicted RBP9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 TKTL2Q9H0I9 626 aa9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 PRORYQ9H606 182 aa9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 KLHL11Q9NVR0 708 aa9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 IL36AQ9UHA7 158 aa9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 IPO11Q9UI26 975 aaKnown RBP9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 HS3ST2Q9Y278 367 aa9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 CA5BQ9Y2D0 317 aa9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 TBC1D30Q9Y2I9 924 aa9.22□□□□□ -0.93
CCDC144NL-203ENST00000539484 TEX51A0A1B0GUA7 166 aa9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 A6NNZ2 444 aa9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 BECN2A8MW95 431 aa9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 C10orf142B7Z368 130 aa9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 TRIM38O00635 465 aa9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 SNAP91O60641 907 aa9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 PIAS2O75928 621 aa9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 ERBB2P04626 1255 aa9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 SLC9A1P19634 815 aa9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 RRM1P23921 792 aa9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 OR1E1P30953 314 aa9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 DNA2P51530 1060 aa9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 NEK3P51956 506 aa9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 TAF1BQ53T94 588 aaPredicted RBP9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 PIP5KL1Q5T9C9 394 aa9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 RETSATQ6NUM9 610 aa9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 C22orf39Q6P5X5 142 aa9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 OLFML1Q6UWY5 402 aa9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 KANSL1Q7Z3B3 1105 aa9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 C14orf80Q86SX3 495 aa9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 ZSCAN30Q86W11 494 aa9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 DCBLD1Q8N8Z6 715 aa9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 DCAF4L2Q8NA75 395 aa9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 TMEM35BQ8NCS4 154 aa9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 LSM14AQ8ND56 463 aaKnown RBP9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 ZNF248Q8NDW4 579 aa9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 ZNF397Q8NF99 534 aaPredicted RBP9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 OR52K2Q8NGK3 314 aa9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 SHC3Q92529 594 aa9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 IFT43Q96FT9 208 aa9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 NAF1Q96HR8 494 aaKnown RBP9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 FEM1CQ96JP0 617 aa9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 USP29Q9HBJ7 922 aa9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 FZD3Q9NPG1 666 aa9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 DNAJC28Q9NX36 388 aa9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 NLGN3Q9NZ94 848 aa9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 VPS51Q9UID3 782 aa9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 RWDD2AQ9UIY3 292 aa9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 FREM2Q5SZK8 3169 aa9.21□□□□□ -0.94
CCDC144NL-203ENST00000539484 GTPBP10A4D1E9 387 aaKnown RBP9.2□□□□□ -0.94
CCDC144NL-203ENST00000539484 CAPN8A6NHC0 703 aa9.2□□□□□ -0.94
CCDC144NL-203ENST00000539484 SRGAP2O75044 1071 aa9.2□□□□□ -0.94
CCDC144NL-203ENST00000539484 LEFTY1O75610 366 aa9.2□□□□□ -0.94
CCDC144NL-203ENST00000539484 CNTN5O94779 1100 aa9.2□□□□□ -0.94
CCDC144NL-203ENST00000539484 MT-CO1P00395 513 aa9.2□□□□□ -0.94
CCDC144NL-203ENST00000539484 PRB1P04280 392 aa9.2□□□□□ -0.94
CCDC144NL-203ENST00000539484 CTSLP07711 333 aa9.2□□□□□ -0.94
CCDC144NL-203ENST00000539484 BMP6P22004 513 aa9.2□□□□□ -0.94
CCDC144NL-203ENST00000539484 IRAK1P51617 712 aa9.2□□□□□ -0.94
CCDC144NL-203ENST00000539484 UCNP55089 124 aa9.2□□□□□ -0.94
CCDC144NL-203ENST00000539484 CLDN2P57739 230 aa9.2□□□□□ -0.94
CCDC144NL-203ENST00000539484 TAS2R38P59533 333 aa9.2□□□□□ -0.94
CCDC144NL-203ENST00000539484 RPS21P63220 83 aaKnown RBP9.2□□□□□ -0.94
CCDC144NL-203ENST00000539484 CXADRP78310 365 aa9.2□□□□□ -0.94
CCDC144NL-203ENST00000539484 GABREP78334 506 aa9.2□□□□□ -0.94
CCDC144NL-203ENST00000539484 SLC20A2Q08357 652 aa9.2□□□□□ -0.94
CCDC144NL-203ENST00000539484 SGCGQ13326 291 aa9.2□□□□□ -0.94
CCDC144NL-203ENST00000539484 C5orf22Q49AR2 442 aa9.2□□□□□ -0.94
CCDC144NL-203ENST00000539484 PTPN20Q4JDL3 420 aa9.2□□□□□ -0.94
CCDC144NL-203ENST00000539484 ALFQ53S48 1182 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms