RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 MAZP56270 477 aaKnown RBP9.65□□□□□ -0.86
CPSF7-217ENST00000537162 TRPC3Q13507 836 aa9.65□□□□□ -0.86
CPSF7-217ENST00000537162 CRB2Q5IJ48 1285 aa9.65□□□□□ -0.86
CPSF7-217ENST00000537162 KIAA1161Q6NSJ0 714 aa9.65□□□□□ -0.86
CPSF7-217ENST00000537162 GKN2Q86XP6 184 aa9.65□□□□□ -0.86
CPSF7-217ENST00000537162 NXPE1Q8N323 547 aa9.65□□□□□ -0.86
CPSF7-217ENST00000537162 ZNF557Q8N988 423 aaPredicted RBP9.65□□□□□ -0.86
CPSF7-217ENST00000537162 CCDC127Q96BQ5 260 aa9.65□□□□□ -0.86
CPSF7-217ENST00000537162 CDK5RAP3Q96JB5 506 aa9.65□□□□□ -0.86
CPSF7-217ENST00000537162 FEM1CQ96JP0 617 aa9.65□□□□□ -0.86
CPSF7-217ENST00000537162 BARD1Q99728 777 aaKnown RBP9.65□□□□□ -0.86
CPSF7-217ENST00000537162 NUDT9Q9BW91 350 aa9.65□□□□□ -0.86
CPSF7-217ENST00000537162 PDRG1Q9NUG6 133 aa9.65□□□□□ -0.86
CPSF7-217ENST00000537162 EXOC7Q9UPT5 735 aa9.65□□□□□ -0.86
CPSF7-217ENST00000537162 ITM2BQ9Y287 266 aa9.65□□□□□ -0.86
CPSF7-217ENST00000537162 ZNF451Q9Y4E5 1061 aa9.65□□□□□ -0.86
CPSF7-217ENST00000537162 JMJD1CQ15652 2540 aa9.64□□□□□ -0.87
CPSF7-217ENST00000537162 PIPSLA2A3N6 862 aa9.64□□□□□ -0.87
CPSF7-217ENST00000537162 FAM221AA4D161 298 aa9.64□□□□□ -0.87
CPSF7-217ENST00000537162 ARGFXA6NJG6 315 aa9.64□□□□□ -0.87
CPSF7-217ENST00000537162 NUDT21O43809 227 aaKnown RBP9.64□□□□□ -0.87
CPSF7-217ENST00000537162 CREG1O75629 220 aa9.64□□□□□ -0.87
CPSF7-217ENST00000537162 ATICP31939 592 aa9.64□□□□□ -0.87
CPSF7-217ENST00000537162 PRPHP41219 470 aa9.64□□□□□ -0.87
CPSF7-217ENST00000537162 RAB15P59190 212 aa9.64□□□□□ -0.87
CPSF7-217ENST00000537162 MC2RQ01718 297 aa9.64□□□□□ -0.87
CPSF7-217ENST00000537162 SGCGQ13326 291 aa9.64□□□□□ -0.87
CPSF7-217ENST00000537162 ADAM9Q13443 819 aa9.64□□□□□ -0.87
CPSF7-217ENST00000537162 TRA2AQ13595 282 aaKnown RBP eCLIP9.64□□□□□ -0.87
CPSF7-217ENST00000537162 SURF1Q15526 300 aa9.64□□□□□ -0.87
CPSF7-217ENST00000537162 ZNF630Q2M218 657 aaPredicted RBP9.64□□□□□ -0.87
CPSF7-217ENST00000537162 ARSIQ5FYB1 569 aa9.64□□□□□ -0.87
CPSF7-217ENST00000537162 MS4A13Q5J8X5 152 aa9.64□□□□□ -0.87
CPSF7-217ENST00000537162 RAB41Q5JT25 222 aa9.64□□□□□ -0.87
CPSF7-217ENST00000537162 TMEM198Q66K66 360 aa9.64□□□□□ -0.87
CPSF7-217ENST00000537162 PARS2Q7L3T8 475 aaKnown RBP9.64□□□□□ -0.87
CPSF7-217ENST00000537162 VPS36Q86VN1 386 aa9.64□□□□□ -0.87
CPSF7-217ENST00000537162 CIR1Q86X95 450 aaPredicted RBP9.64□□□□□ -0.87
CPSF7-217ENST00000537162 SYCP3Q8IZU3 236 aa9.64□□□□□ -0.87
CPSF7-217ENST00000537162 IQCKQ8N0W5 287 aa9.64□□□□□ -0.87
CPSF7-217ENST00000537162 ARHGAP18Q8N392 663 aa9.64□□□□□ -0.87
CPSF7-217ENST00000537162 FAM46DQ8NEK8 389 aa9.64□□□□□ -0.87
CPSF7-217ENST00000537162 OR52K2Q8NGK3 314 aa9.64□□□□□ -0.87
CPSF7-217ENST00000537162 OR2A12Q8NGT7 310 aa9.64□□□□□ -0.87
CPSF7-217ENST00000537162 GRIN3AQ8TCU5 1115 aa9.64□□□□□ -0.87
CPSF7-217ENST00000537162 KCTD13Q8WZ19 329 aa9.64□□□□□ -0.87
CPSF7-217ENST00000537162 INPP5DQ92835 1189 aa9.64□□□□□ -0.87
CPSF7-217ENST00000537162 ERCC4Q92889 916 aaPredicted RBP9.64□□□□□ -0.87
CPSF7-217ENST00000537162 SYAP1Q96A49 352 aaPredicted RBP9.64□□□□□ -0.87
CPSF7-217ENST00000537162 TEFMQ96QE5 360 aaKnown RBP9.64□□□□□ -0.87
CPSF7-217ENST00000537162 RUFY1Q96T51 708 aa9.64□□□□□ -0.87
CPSF7-217ENST00000537162 HDAC8Q9BY41 377 aa9.64□□□□□ -0.87
CPSF7-217ENST00000537162 DUSP16Q9BY84 665 aa9.64□□□□□ -0.87
CPSF7-217ENST00000537162 ULBP1Q9BZM6 244 aa9.64□□□□□ -0.87
CPSF7-217ENST00000537162 MRPL44Q9H9J2 332 aaKnown RBP9.64□□□□□ -0.87
CPSF7-217ENST00000537162 XPO7Q9UIA9 1087 aaKnown RBP9.64□□□□□ -0.87
CPSF7-217ENST00000537162 K7ERQ8 282 aa9.63□□□□□ -0.87
CPSF7-217ENST00000537162 TULP2O00295 520 aa9.63□□□□□ -0.87
CPSF7-217ENST00000537162 E2F3O00716 465 aa9.63□□□□□ -0.87
CPSF7-217ENST00000537162 INPP4BO15327 924 aa9.63□□□□□ -0.87
CPSF7-217ENST00000537162 GCNT3O95395 438 aa9.63□□□□□ -0.87
CPSF7-217ENST00000537162 MT-CO1P00395 513 aa9.63□□□□□ -0.87
CPSF7-217ENST00000537162 ADRB3P13945 408 aa9.63□□□□□ -0.87
CPSF7-217ENST00000537162 GJB2P29033 226 aa9.63□□□□□ -0.87
CPSF7-217ENST00000537162 SLC11A2P49281 568 aa9.63□□□□□ -0.87
CPSF7-217ENST00000537162 FOXD4Q12950 439 aaPredicted RBP9.63□□□□□ -0.87
CPSF7-217ENST00000537162 CHRNA6Q15825 494 aa9.63□□□□□ -0.87
CPSF7-217ENST00000537162 ZNF699Q32M78 642 aa9.63□□□□□ -0.87
CPSF7-217ENST00000537162 ZNF667Q5HYK9 610 aa9.63□□□□□ -0.87
CPSF7-217ENST00000537162 BNC2Q6ZN30 1099 aaPredicted RBP9.63□□□□□ -0.87
CPSF7-217ENST00000537162 SH2D3CQ8N5H7 860 aa9.63□□□□□ -0.87
CPSF7-217ENST00000537162 ST6GALNAC3Q8NDV1 305 aa9.63□□□□□ -0.87
CPSF7-217ENST00000537162 TMIEQ8NEW7 156 aa9.63□□□□□ -0.87
CPSF7-217ENST00000537162 FDCSPQ8NFU4 85 aa9.63□□□□□ -0.87
CPSF7-217ENST00000537162 OR4D9Q8NGE8 314 aa9.63□□□□□ -0.87
CPSF7-217ENST00000537162 CCL4L1Q8NHW4 92 aa9.63□□□□□ -0.87
CPSF7-217ENST00000537162 UBE2Q2Q8WVN8 375 aa9.63□□□□□ -0.87
CPSF7-217ENST00000537162 RAD54LQ92698 747 aa9.63□□□□□ -0.87
CPSF7-217ENST00000537162 FUBP1Q96AE4 644 aaKnown RBP9.63□□□□□ -0.87
CPSF7-217ENST00000537162 HDAC11Q96DB2 347 aa9.63□□□□□ -0.87
CPSF7-217ENST00000537162 ALG14Q96F25 216 aa9.63□□□□□ -0.87
CPSF7-217ENST00000537162 IRX2Q9BZI1 471 aaPredicted RBP9.63□□□□□ -0.87
CPSF7-217ENST00000537162 TRIT1Q9H3H1 467 aaKnown RBP9.63□□□□□ -0.87
CPSF7-217ENST00000537162 VRTNQ9H8Y1 702 aa9.63□□□□□ -0.87
CPSF7-217ENST00000537162 CBX8Q9HC52 389 aa9.63□□□□□ -0.87
CPSF7-217ENST00000537162 DYRK4Q9NR20 520 aa9.63□□□□□ -0.87
CPSF7-217ENST00000537162 OLA1Q9NTK5 396 aaKnown RBP9.63□□□□□ -0.87
CPSF7-217ENST00000537162 ANKRD36A6QL64 1941 aa9.62□□□□□ -0.87
CPSF7-217ENST00000537162 YJEFN3A6XGL0 299 aa9.62□□□□□ -0.87
CPSF7-217ENST00000537162 A8MU76 341 aa9.62□□□□□ -0.87
CPSF7-217ENST00000537162 E7ENQ6 273 aa9.62□□□□□ -0.87
CPSF7-217ENST00000537162 F5H423 210 aaPredicted RBP9.62□□□□□ -0.87
CPSF7-217ENST00000537162 KCNN4O15554 427 aa9.62□□□□□ -0.87
CPSF7-217ENST00000537162 CEACAM4O75871 244 aa9.62□□□□□ -0.87
CPSF7-217ENST00000537162 CLSTN1O94985 981 aa9.62□□□□□ -0.87
CPSF7-217ENST00000537162 VNN1O95497 513 aa9.62□□□□□ -0.87
CPSF7-217ENST00000537162 ZBED1O96006 694 aa9.62□□□□□ -0.87
CPSF7-217ENST00000537162 ABL2P42684 1182 aa9.62□□□□□ -0.87
CPSF7-217ENST00000537162 CASP4P49662 377 aa9.62□□□□□ -0.87
CPSF7-217ENST00000537162 TKTL1P51854 596 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms