RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 PSMD8P48556 350 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 HLCSP50747 726 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 MYBPC1Q00872 1141 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 DUOXA2Q1HG44 320 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 DGKKQ5KSL6 1271 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 TTC23Q5W5X9 447 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 GATAD2AQ86YP4 633 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 ABRAQ8N0Z2 381 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 ANKFN1Q8N957 763 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 ELMO1Q92556 727 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 MARVELD3Q96A59 401 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 SLC45A3Q96JT2 553 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 MAGEB5Q9BZ81 275 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 RNF38Q9H0F5 515 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 PDZD7Q9H5P4 517 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 AS3MTQ9HBK9 375 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 COQ4Q9Y3A0 265 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 TPRKBQ9Y3C4 175 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 ZNF142P52746 1687 aaPredicted RBP5.45□□□□□ -1.54
PTPRD-213ENST00000537002 CNTNAP2Q9UHC6 1331 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 TFECO14948 347 aaPredicted RBP5.45□□□□□ -1.54
PTPRD-213ENST00000537002 ASNSP08243 561 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 TAL1P17542 331 aaPredicted RBP5.45□□□□□ -1.54
PTPRD-213ENST00000537002 TPH1P17752 444 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 KLRK1P26718 216 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 SLC26A3P40879 764 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 PPP4CP60510 307 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 HACD2Q6Y1H2 254 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 LZTR1Q8N653 840 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 METTL25Q8N6Q8 603 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 CHAC2Q8WUX2 184 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 KBTBD7Q8WVZ9 684 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 SERAC1Q96JX3 654 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 WDR55Q9H6Y2 383 aaPredicted RBP5.45□□□□□ -1.54
PTPRD-213ENST00000537002 INIPQ9NRY2 104 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 THG1LQ9NWX6 298 aaKnown RBP5.45□□□□□ -1.54
PTPRD-213ENST00000537002 COMMD8Q9NX08 183 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 PCDHGA3Q9Y5H0 932 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 CCDC182A6NF36 153 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 ACOX3O15254 700 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 ATG7O95352 703 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 IFI30P13284 250 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 IST1P53990 364 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 SLC12A3P55017 1021 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.45□□□□□ -1.54
PTPRD-213ENST00000537002 CCNYL2Q5T2Q4 361 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 GK5Q6ZS86 529 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 ATG16L2Q8NAA4 619 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 DCAKDQ8WVC6 231 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 SPAG4Q9NPE6 437 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 SLC13A4Q9UKG4 626 aa5.45□□□□□ -1.54
PTPRD-213ENST00000537002 FARP1Q9Y4F1 1045 aaPredicted RBP5.45□□□□□ -1.54
PTPRD-213ENST00000537002 LOXHD1Q8IVV2 1947 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 PRSS51A0A1B0GVH4 220 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 BBIP1A8MTZ0 92 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 DYRK3O43781 588 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 UMPSP11172 480 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 ATF4P18848 351 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-213ENST00000537002 DNAJB2P25686 324 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 HARS2P49590 506 aaKnown RBP5.44□□□□□ -1.54
PTPRD-213ENST00000537002 SERPINH1P50454 418 aaKnown RBP5.44□□□□□ -1.54
PTPRD-213ENST00000537002 CRADDP78560 199 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 TNFAIP2Q03169 654 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 PUS10Q3MIT2 529 aaKnown RBP5.44□□□□□ -1.54
PTPRD-213ENST00000537002 C16orf86Q6ZW13 317 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 KCTD8Q6ZWB6 473 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 PHF13Q86YI8 300 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-213ENST00000537002 SHCBP1Q8NEM2 672 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 PROX1Q92786 737 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 PHF21BQ96EK2 531 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 UHRF1Q96T88 793 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-213ENST00000537002 PCDHB18PQ96TA0 734 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 AIFM2Q9BRQ8 373 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 TRAF4Q9BUZ4 470 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-213ENST00000537002 HDHD2Q9H0R4 259 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 SYNDIG1Q9H7V2 258 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 NMRAL1Q9HBL8 299 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 NDFIP2Q9NV92 336 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 IMPAD1Q9NX62 359 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 SNX8Q9Y5X2 465 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 LTBP4Q8N2S1 1624 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 TCRBV9S1A1TA0A576 114 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 FAM86B1E9PN63 330 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 APOC4-APOC2K7ER74 178 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 TSPAN4O14817 238 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 APOC2P02655 101 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 ZNF37AP17032 561 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-213ENST00000537002 POU1F1P28069 291 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 PKLRP30613 574 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 GNA12Q03113 381 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 CSTF3Q12996 717 aaKnown RBP5.44□□□□□ -1.54
PTPRD-213ENST00000537002 TRIP4Q15650 581 aaPredicted RBP5.44□□□□□ -1.54
PTPRD-213ENST00000537002 RFX4Q33E94 735 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 GRTP1Q5TC63 336 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 OFCC1Q8IZS5 231 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 UBR7Q8N806 425 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 KCNN1Q92952 543 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 CRAMP1Q96RY5 1269 aa5.44□□□□□ -1.54
PTPRD-213ENST00000537002 MRPL4Q9BYD3 311 aaKnown RBP5.44□□□□□ -1.54
PTPRD-213ENST00000537002 TNFRSF10DQ9UBN6 386 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms