RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 HADHAP40939 763 aa13.53□□□□□ -0.24
VPS33B-202ENST00000535906 CD86P42081 329 aa13.53□□□□□ -0.24
VPS33B-202ENST00000535906 NUMBP49757 651 aa13.53□□□□□ -0.24
VPS33B-202ENST00000535906 ITKQ08881 620 aa13.53□□□□□ -0.24
VPS33B-202ENST00000535906 SEPT6Q14141 434 aa13.53□□□□□ -0.24
VPS33B-202ENST00000535906 UBAP2LQ14157 1087 aaKnown RBP13.53□□□□□ -0.24
VPS33B-202ENST00000535906 MUM1Q2TAK8 710 aa13.53□□□□□ -0.24
VPS33B-202ENST00000535906 NET1Q7Z628 596 aaPredicted RBP13.53□□□□□ -0.24
VPS33B-202ENST00000535906 SLC41A1Q8IVJ1 513 aa13.53□□□□□ -0.24
VPS33B-202ENST00000535906 SCUBE1Q8IWY4 988 aa13.53□□□□□ -0.24
VPS33B-202ENST00000535906 CRIPAKQ8N1N5 446 aa13.53□□□□□ -0.24
VPS33B-202ENST00000535906 GIPC2Q8TF65 315 aa13.53□□□□□ -0.24
VPS33B-202ENST00000535906 PTCD2Q8WV60 388 aaKnown RBP13.53□□□□□ -0.24
VPS33B-202ENST00000535906 MOCOSQ96EN8 888 aa13.53□□□□□ -0.24
VPS33B-202ENST00000535906 MRM3Q9HC36 420 aaKnown RBP13.53□□□□□ -0.24
VPS33B-202ENST00000535906 OLA1Q9NTK5 396 aaKnown RBP13.53□□□□□ -0.24
VPS33B-202ENST00000535906 LRFN2Q9ULH4 789 aa13.53□□□□□ -0.24
VPS33B-202ENST00000535906 APOBEC2Q9Y235 224 aaKnown RBP13.53□□□□□ -0.24
VPS33B-202ENST00000535906 TK2O00142 265 aa13.52□□□□□ -0.24
VPS33B-202ENST00000535906 ZNF195O14628 629 aa13.52□□□□□ -0.24
VPS33B-202ENST00000535906 MMP2P08253 660 aa13.52□□□□□ -0.24
VPS33B-202ENST00000535906 SBK3P0C264 359 aa13.52□□□□□ -0.24
VPS33B-202ENST00000535906 SLC1A2P43004 574 aa13.52□□□□□ -0.24
VPS33B-202ENST00000535906 PSEN1P49768 467 aa13.52□□□□□ -0.24
VPS33B-202ENST00000535906 DSC2Q02487 901 aa13.52□□□□□ -0.24
VPS33B-202ENST00000535906 BFSP2Q13515 415 aa13.52□□□□□ -0.24
VPS33B-202ENST00000535906 ZNF460Q14592 562 aa13.52□□□□□ -0.24
VPS33B-202ENST00000535906 RABGAP1LQ5R372 815 aa13.52□□□□□ -0.24
VPS33B-202ENST00000535906 VWA5B1Q5TIE3 1220 aa13.52□□□□□ -0.24
VPS33B-202ENST00000535906 PRSS55Q6UWB4 352 aaPredicted RBP13.52□□□□□ -0.24
VPS33B-202ENST00000535906 LRRC74BQ6ZQY2 392 aa13.52□□□□□ -0.24
VPS33B-202ENST00000535906 ZNF354CQ86Y25 554 aa13.52□□□□□ -0.24
VPS33B-202ENST00000535906 CEP97Q8IW35 865 aa13.52□□□□□ -0.24
VPS33B-202ENST00000535906 BCL7CQ8WUZ0 217 aaPredicted RBP13.52□□□□□ -0.24
VPS33B-202ENST00000535906 NRG4Q8WWG1 115 aa13.52□□□□□ -0.24
VPS33B-202ENST00000535906 SPATA17Q96L03 361 aa13.52□□□□□ -0.24
VPS33B-202ENST00000535906 RPRD1AQ96P16 312 aaPredicted RBP13.52□□□□□ -0.24
VPS33B-202ENST00000535906 FAM167BQ9BTA0 163 aa13.52□□□□□ -0.24
VPS33B-202ENST00000535906 TASP1Q9H6P5 420 aa13.52□□□□□ -0.24
VPS33B-202ENST00000535906 SP110Q9HB58 689 aa13.52□□□□□ -0.24
VPS33B-202ENST00000535906 ARNT2Q9HBZ2 717 aa13.52□□□□□ -0.24
VPS33B-202ENST00000535906 TLK1Q9UKI8 766 aa13.52□□□□□ -0.24
VPS33B-202ENST00000535906 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.52□□□□□ -0.25
VPS33B-202ENST00000535906 DRGXA6NNA5 263 aa13.52□□□□□ -0.25
VPS33B-202ENST00000535906 KIF1CO43896 1103 aaKnown RBP13.52□□□□□ -0.25
VPS33B-202ENST00000535906 KLHL2O95198 593 aa13.52□□□□□ -0.25
VPS33B-202ENST00000535906 GLRBP48167 497 aa13.52□□□□□ -0.25
VPS33B-202ENST00000535906 TRMT5Q32P41 509 aaKnown RBP13.52□□□□□ -0.25
VPS33B-202ENST00000535906 NADSYN1Q6IA69 706 aa13.52□□□□□ -0.25
VPS33B-202ENST00000535906 ANO7Q6IWH7 933 aa13.52□□□□□ -0.25
VPS33B-202ENST00000535906 LMNTD2Q8IXW0 634 aa13.52□□□□□ -0.25
VPS33B-202ENST00000535906 REM2Q8IYK8 340 aaPredicted RBP13.52□□□□□ -0.25
VPS33B-202ENST00000535906 ULK2Q8IYT8 1036 aa13.52□□□□□ -0.25
VPS33B-202ENST00000535906 CENPLQ8N0S6 344 aaPredicted RBP13.52□□□□□ -0.25
VPS33B-202ENST00000535906 KCTD4Q8WVF5 259 aa13.52□□□□□ -0.25
VPS33B-202ENST00000535906 FATE1Q969F0 183 aa13.52□□□□□ -0.25
VPS33B-202ENST00000535906 ACE2Q9BYF1 805 aaPredicted RBP13.52□□□□□ -0.25
VPS33B-202ENST00000535906 ATP13A1Q9HD20 1204 aa13.52□□□□□ -0.25
VPS33B-202ENST00000535906 ACSS2Q9NR19 701 aa13.52□□□□□ -0.25
VPS33B-202ENST00000535906 DNAJC28Q9NX36 388 aa13.52□□□□□ -0.25
VPS33B-202ENST00000535906 PCDHB12Q9Y5F1 795 aa13.52□□□□□ -0.25
VPS33B-202ENST00000535906 TBKBP1A7MCY6 615 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 TLR5O60602 858 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 TRIM13O60858 407 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 SIN3BO75182 1162 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 CIB2O75838 187 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 ALOX15P16050 662 aaPredicted RBP13.51□□□□□ -0.25
VPS33B-202ENST00000535906 ATF6P18850 670 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 IDH3AP50213 366 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 KCNQ1P51787 676 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 USP4Q13107 963 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 MSLNQ13421 630 aaPredicted RBP13.51□□□□□ -0.25
VPS33B-202ENST00000535906 POLD3Q15054 466 aaPredicted RBP13.51□□□□□ -0.25
VPS33B-202ENST00000535906 UGP2Q16851 508 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 C6orf163Q5TEZ5 329 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 ZNF470Q6ECI4 717 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 PGBD5Q8N414 524 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 ZNF781Q8N8C0 355 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 SLAIN1Q8ND83 568 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 DTX3LQ8TDB6 740 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 SEPT8Q92599 483 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 THTPAQ9BU02 230 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 OXSMQ9NWU1 459 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 DONSONQ9NYP3 566 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 CORO1CQ9ULV4 474 aaPredicted RBP13.51□□□□□ -0.25
VPS33B-202ENST00000535906 RUVBL2Q9Y230 463 aaKnown RBP13.51□□□□□ -0.25
VPS33B-202ENST00000535906 ANKRD6Q9Y2G4 727 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 CDY1Q9Y6F8 540 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 SCN5AQ14524 2016 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 FAM95CA0A1B0GW59 222 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 AURKAO14965 403 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 ADAM12O43184 909 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 GJB3O75712 270 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 ZDHHC11BP0C7U3 371 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 MYL4P12829 197 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 OR1E1P30953 314 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 ACVRL1P37023 503 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 ETFBP38117 255 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 ACTR3P61158 418 aa13.51□□□□□ -0.25
VPS33B-202ENST00000535906 MXRA7P84157 204 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms