RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 AASDHPPTQ9NRN7 309 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 CRABP2P29373 138 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 AKT2P31751 481 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 HPCAL1P37235 193 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 MC1RQ01726 317 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 CFAP52Q8N1V2 620 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 C7orf57Q8NEG2 295 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 ASB8Q9H765 288 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 TSPAN9O75954 239 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 GOT1P17174 413 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 THOP1P52888 689 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 SOCS4Q8WXH5 440 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 POLR1EQ9GZS1 481 aaKnown RBP12.74□□□□□ -0.37
SPG11-203ENST00000535302 ASB7Q9H672 318 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 FAM237BA0A1B0GVD1 139 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 EPHB6O15197 1021 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 EPN2O95208 641 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 PROCP04070 461 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 MAPTP10636 758 aaKnown RBP12.74□□□□□ -0.37
SPG11-203ENST00000535302 LRPAP1P30533 357 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 C21orf59P57076 290 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 PEG10Q86TG7 708 aaKnown RBP12.74□□□□□ -0.37
SPG11-203ENST00000535302 LNX2Q8N448 690 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 LNX1Q8TBB1 728 aaPredicted RBP12.74□□□□□ -0.37
SPG11-203ENST00000535302 PNPT1Q8TCS8 783 aaKnown RBP12.74□□□□□ -0.37
SPG11-203ENST00000535302 NAT9Q9BTE0 207 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 PRRG3Q9BZD7 231 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 GOLGA2P5Q9HBQ8 144 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 ADPRHL2Q9NX46 363 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 CASZ1Q86V15 1759 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 COL5A2P05997 1499 aaPredicted RBP12.74□□□□□ -0.37
SPG11-203ENST00000535302 MSX2P35548 267 aaPredicted RBP12.74□□□□□ -0.37
SPG11-203ENST00000535302 CHKAP35790 457 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 ATP5C1P36542 298 aaKnown RBP12.74□□□□□ -0.37
SPG11-203ENST00000535302 CASP7P55210 303 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 SUZ12Q15022 739 aaKnown RBP12.74□□□□□ -0.37
SPG11-203ENST00000535302 CARTPTQ16568 116 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 FUCA2Q9BTY2 467 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 EPB41L4BQ9H329 900 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 CERS4Q9HA82 394 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 MRGBPQ9NV56 204 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 AHSPQ9NZD4 102 aa12.74□□□□□ -0.37
SPG11-203ENST00000535302 FAM92AA1XBS5 289 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 IL1BP01584 269 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 CCDC166P0CW27 439 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 NCK1P16333 377 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 STARP49675 285 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 FCHO2Q0JRZ9 810 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 KAT2AQ92830 837 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 BTBD10Q9BSF8 475 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 TRMT13Q9NUP7 481 aaKnown RBP12.73□□□□□ -0.37
SPG11-203ENST00000535302 PTGFRNQ9P2B2 879 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 ADGRA3Q8IWK6 1321 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 MRPS6P82932 125 aaKnown RBP12.73□□□□□ -0.37
SPG11-203ENST00000535302 IQSEC1Q6DN90 963 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 C1orf186Q6ZWK4 172 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 USP45Q70EL2 814 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 ZNF276Q8N554 614 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 DIP2CQ9Y2E4 1556 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 ASTN1O14525 1302 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 BIRC5O15392 142 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 LGR5O75473 907 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 KCNH1O95259 989 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 GCNT1Q02742 428 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 CERS5Q8N5B7 392 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 OR5B17Q8NGF7 314 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 CAVIN3Q969G5 261 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 FAM129BQ96TA1 746 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 MRPL45Q9BRJ2 306 aaKnown RBP12.73□□□□□ -0.37
SPG11-203ENST00000535302 BATF3Q9NR55 127 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 KPNA5O15131 536 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 OR5F1O95221 314 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 TRUB2O95900 331 aaKnown RBP12.73□□□□□ -0.37
SPG11-203ENST00000535302 HDCP19113 662 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 S100A3P33764 101 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 GPR142Q7Z601 462 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 ZDHHC17Q8IUH5 632 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 SNRNP25Q9BV90 132 aaKnown RBP12.73□□□□□ -0.37
SPG11-203ENST00000535302 SLCO1B7G3V0H7 640 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 ERN1O75460 977 aaKnown RBP12.73□□□□□ -0.37
SPG11-203ENST00000535302 H2AFXP16104 143 aaPredicted RBP12.73□□□□□ -0.37
SPG11-203ENST00000535302 MCRS1Q96EZ8 462 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 THAP1Q9NVV9 213 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 RBMX2Q9Y388 322 aaKnown RBP12.73□□□□□ -0.37
SPG11-203ENST00000535302 MED26O95402 600 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 PAEPP09466 180 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 OR4Q2P0C623 313 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 WARSP23381 471 aaKnown RBP12.73□□□□□ -0.37
SPG11-203ENST00000535302 BRCC3P46736 316 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 NR2C2P49116 596 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 RABGGTBP53611 331 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 LGMNQ99538 433 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 TRHDEQ9UKU6 1024 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 ZMYND8Q9ULU4 1186 aaPredicted RBP12.73□□□□□ -0.37
SPG11-203ENST00000535302 BTBD3Q9Y2F9 522 aa12.73□□□□□ -0.37
SPG11-203ENST00000535302 PAPSS1O43252 624 aaPredicted RBP12.72□□□□□ -0.37
SPG11-203ENST00000535302 ITPKBP27987 946 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 CAPSQ13938 189 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 GRB14Q14449 540 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 ECM1Q16610 540 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms