RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 DYNC1LI2O43237 492 aaPredicted RBP19.55■□□□□ 0.72
CAPN1-226ENST00000533820 GPR32O75388 356 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 RNASEH2AO75792 299 aaKnown RBP19.55■□□□□ 0.72
CAPN1-226ENST00000533820 MYBPC1Q00872 1141 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 PTK2BQ14289 1009 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 R3HDM1Q15032 1099 aaKnown RBP19.55■□□□□ 0.72
CAPN1-226ENST00000533820 IL23RQ5VWK5 629 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 KLC3Q6P597 504 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 ALKAL1Q6UXT8 129 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 BTBD9Q96Q07 612 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 WDCPQ9H6R7 721 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 DERAQ9Y315 318 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 PPP1R3AQ16821 1122 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 PAN2Q504Q3 1202 aaKnown RBP19.55■□□□□ 0.72
CAPN1-226ENST00000533820 AMIGO2Q86SJ2 522 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 PDCD6IPQ8WUM4 868 aaKnown RBP19.55■□□□□ 0.72
CAPN1-226ENST00000533820 NT5C3BQ969T7 300 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 ISL2Q96A47 359 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 GPR22Q99680 433 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 IL22Q9GZX6 179 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 EFCAB1Q9HAE3 211 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 CCDC167Q9P0B6 97 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 RIMS3Q9UJD0 308 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 ATP6AP2A0A1C7CYW4 349 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 ATP6AP2O75787 350 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 SNAI1O95863 264 aaPredicted RBP19.55■□□□□ 0.72
CAPN1-226ENST00000533820 MMP3P08254 477 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 SCNN1AP37088 669 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 CHRNA4P43681 627 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 XIAPP98170 497 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 CDH17Q12864 832 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 CSHL1Q14406 222 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 DPP9Q86TI2 863 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 ANKRD13AQ8IZ07 590 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 EME1Q96AY2 570 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 CDCA5Q96FF9 252 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 COLEC11Q9BWP8 271 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 RHOJQ9H4E5 214 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 POMKQ9H5K3 350 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 CRTAC1Q9NQ79 661 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 GMPR2Q9P2T1 348 aaKnown RBP19.55■□□□□ 0.72
CAPN1-226ENST00000533820 NUDT5Q9UKK9 219 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 PRPF19Q9UMS4 504 aaKnown RBP19.55■□□□□ 0.72
CAPN1-226ENST00000533820 TBC1D30Q9Y2I9 924 aa19.55■□□□□ 0.72
CAPN1-226ENST00000533820 FAM95CA0A1B0GW59 222 aa19.54■□□□□ 0.72
CAPN1-226ENST00000533820 CD97P48960 835 aa19.54■□□□□ 0.72
CAPN1-226ENST00000533820 RPL34P49207 117 aaKnown RBP19.54■□□□□ 0.72
CAPN1-226ENST00000533820 SULT2A1Q06520 285 aa19.54■□□□□ 0.72
CAPN1-226ENST00000533820 PCSK7Q16549 785 aa19.54■□□□□ 0.72
CAPN1-226ENST00000533820 PITRM1Q5JRX3 1037 aa19.54■□□□□ 0.72
CAPN1-226ENST00000533820 GPC2Q8N158 579 aa19.54■□□□□ 0.72
CAPN1-226ENST00000533820 TXNDC5Q8NBS9 432 aaKnown RBP19.54■□□□□ 0.72
CAPN1-226ENST00000533820 PHF21BQ96EK2 531 aa19.54■□□□□ 0.72
CAPN1-226ENST00000533820 FICDQ9BVA6 458 aa19.54■□□□□ 0.72
CAPN1-226ENST00000533820 FAM124BQ9H5Z6 455 aaPredicted RBP19.54■□□□□ 0.72
CAPN1-226ENST00000533820 TRPC7Q9HCX4 862 aa19.54■□□□□ 0.72
CAPN1-226ENST00000533820 CABYRO75952 493 aa19.54■□□□□ 0.72
CAPN1-226ENST00000533820 DARSP14868 501 aaKnown RBP19.54■□□□□ 0.72
CAPN1-226ENST00000533820 CSE1LP55060 971 aaKnown RBP19.54■□□□□ 0.72
CAPN1-226ENST00000533820 TAS2R39P59534 338 aa19.54■□□□□ 0.72
CAPN1-226ENST00000533820 PDAP1Q13442 181 aaKnown RBP19.54■□□□□ 0.72
CAPN1-226ENST00000533820 SLC12A1Q13621 1099 aa19.54■□□□□ 0.72
CAPN1-226ENST00000533820 SV2CQ496J9 727 aa19.54■□□□□ 0.72
CAPN1-226ENST00000533820 ZNF470Q6ECI4 717 aa19.54■□□□□ 0.72
CAPN1-226ENST00000533820 TWF2Q6IBS0 349 aaKnown RBP19.54■□□□□ 0.72
CAPN1-226ENST00000533820 CNSTQ6PJW8 725 aa19.54■□□□□ 0.72
CAPN1-226ENST00000533820 TEKT5Q96M29 485 aa19.54■□□□□ 0.72
CAPN1-226ENST00000533820 SLC39A3Q9BRY0 314 aa19.54■□□□□ 0.72
CAPN1-226ENST00000533820 Q9H521 79 aa19.54■□□□□ 0.72
CAPN1-226ENST00000533820 ZBTB26Q9HCK0 441 aa19.54■□□□□ 0.72
CAPN1-226ENST00000533820 TNFRSF12AQ9NP84 129 aa19.54■□□□□ 0.72
CAPN1-226ENST00000533820 FBXW11Q9UKB1 542 aa19.54■□□□□ 0.72
CAPN1-226ENST00000533820 DYTNA2CJ06 578 aa19.53■□□□□ 0.72
CAPN1-226ENST00000533820 TCAF2A6NFQ2 919 aa19.53■□□□□ 0.72
CAPN1-226ENST00000533820 CXCL11O14625 94 aa19.53■□□□□ 0.72
CAPN1-226ENST00000533820 VILLO15195 856 aa19.53■□□□□ 0.72
CAPN1-226ENST00000533820 NME5P56597 212 aa19.53■□□□□ 0.72
CAPN1-226ENST00000533820 KCTD21Q4G0X4 260 aa19.53■□□□□ 0.72
CAPN1-226ENST00000533820 ITPRIPL1Q6GPH6 555 aa19.53■□□□□ 0.72
CAPN1-226ENST00000533820 KLHDC10Q6PID8 442 aa19.53■□□□□ 0.72
CAPN1-226ENST00000533820 PGAM4Q8N0Y7 254 aa19.53■□□□□ 0.72
CAPN1-226ENST00000533820 STYXQ8WUJ0 223 aa19.53■□□□□ 0.72
CAPN1-226ENST00000533820 ZNF419Q96HQ0 510 aaPredicted RBP19.53■□□□□ 0.72
CAPN1-226ENST00000533820 PRICKLE1Q96MT3 831 aaPredicted RBP19.53■□□□□ 0.72
CAPN1-226ENST00000533820 SMOQ99835 787 aa19.53■□□□□ 0.72
CAPN1-226ENST00000533820 CCL22O00626 93 aa19.53■□□□□ 0.72
CAPN1-226ENST00000533820 RPL5P46777 297 aaKnown RBP19.53■□□□□ 0.72
CAPN1-226ENST00000533820 NPY2RP49146 381 aa19.53■□□□□ 0.72
CAPN1-226ENST00000533820 DAOAP59103 153 aa19.53■□□□□ 0.72
CAPN1-226ENST00000533820 MYLK3Q32MK0 819 aa19.53■□□□□ 0.72
CAPN1-226ENST00000533820 TSTD2Q5T7W7 516 aa19.53■□□□□ 0.72
CAPN1-226ENST00000533820 GRIN3AQ8TCU5 1115 aa19.53■□□□□ 0.72
CAPN1-226ENST00000533820 GDAP2Q9NXN4 497 aa19.53■□□□□ 0.72
CAPN1-226ENST00000533820 NRCAMQ92823 1304 aa19.53■□□□□ 0.72
CAPN1-226ENST00000533820 E7ENX8 843 aa19.53■□□□□ 0.72
CAPN1-226ENST00000533820 EIF3FO00303 357 aaPredicted RBP19.53■□□□□ 0.72
CAPN1-226ENST00000533820 STMN1P16949 149 aa19.53■□□□□ 0.72
CAPN1-226ENST00000533820 KCNA5P22460 613 aa19.53■□□□□ 0.72
CAPN1-226ENST00000533820 EPHX2P34913 555 aa19.53■□□□□ 0.72
CAPN1-226ENST00000533820 ZNF789Q5FWF6 425 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms