RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 PCDHB11Q9Y5F2 797 aa11.75□□□□□ -0.53
CMTM1-216ENST00000533078 PCDHGA7Q9Y5G6 932 aa11.75□□□□□ -0.53
CMTM1-216ENST00000533078 C16orf96A6NNT2 1141 aa11.74□□□□□ -0.53
CMTM1-216ENST00000533078 TM7SF2O76062 418 aa11.74□□□□□ -0.53
CMTM1-216ENST00000533078 ERBB2P04626 1255 aa11.74□□□□□ -0.53
CMTM1-216ENST00000533078 ITGB2P05107 769 aa11.74□□□□□ -0.53
CMTM1-216ENST00000533078 HTR1BP28222 390 aa11.74□□□□□ -0.53
CMTM1-216ENST00000533078 BPIFB4P59827 614 aa11.74□□□□□ -0.53
CMTM1-216ENST00000533078 PFN3P60673 137 aa11.74□□□□□ -0.53
CMTM1-216ENST00000533078 SNRPD1P62314 119 aaKnown RBP11.74□□□□□ -0.53
CMTM1-216ENST00000533078 EIF2B5Q13144 721 aaKnown RBP11.74□□□□□ -0.53
CMTM1-216ENST00000533078 C1orf61Q13536 156 aa11.74□□□□□ -0.53
CMTM1-216ENST00000533078 FGL2Q14314 439 aa11.74□□□□□ -0.53
CMTM1-216ENST00000533078 EXOC3L4Q17RC7 722 aa11.74□□□□□ -0.53
CMTM1-216ENST00000533078 ZNF805Q5CZA5 627 aa11.74□□□□□ -0.53
CMTM1-216ENST00000533078 PERM1Q5SV97 790 aa11.74□□□□□ -0.53
CMTM1-216ENST00000533078 FAM102AQ5T9C2 384 aaPredicted RBP11.74□□□□□ -0.53
CMTM1-216ENST00000533078 TRIM65Q6PJ69 517 aa11.74□□□□□ -0.53
CMTM1-216ENST00000533078 MACC1Q6ZN28 852 aa11.74□□□□□ -0.53
CMTM1-216ENST00000533078 ATG14Q6ZNE5 492 aa11.74□□□□□ -0.53
CMTM1-216ENST00000533078 RAB11FIP2Q7L804 512 aa11.74□□□□□ -0.53
CMTM1-216ENST00000533078 VPS36Q86VN1 386 aa11.74□□□□□ -0.53
CMTM1-216ENST00000533078 PLPP6Q8IY26 295 aa11.74□□□□□ -0.53
CMTM1-216ENST00000533078 RBFAQ8N0V3 343 aa11.74□□□□□ -0.53
CMTM1-216ENST00000533078 ATL2Q8NHH9 583 aa11.74□□□□□ -0.53
CMTM1-216ENST00000533078 CXorf40AQ8TE69 158 aa11.74□□□□□ -0.53
CMTM1-216ENST00000533078 ISG20Q96AZ6 181 aaKnown RBP11.74□□□□□ -0.53
CMTM1-216ENST00000533078 PGAP3Q96FM1 320 aaPredicted RBP11.74□□□□□ -0.53
CMTM1-216ENST00000533078 PRR11Q96HE9 360 aaPredicted RBP11.74□□□□□ -0.53
CMTM1-216ENST00000533078 HAPLN3Q96S86 360 aa11.74□□□□□ -0.53
CMTM1-216ENST00000533078 NPY6RQ99463 290 aa11.74□□□□□ -0.53
CMTM1-216ENST00000533078 CRACR2AQ9BSW2 395 aa11.74□□□□□ -0.53
CMTM1-216ENST00000533078 LRRC61Q9BV99 259 aa11.74□□□□□ -0.53
CMTM1-216ENST00000533078 TM6SF2Q9BZW4 377 aa11.74□□□□□ -0.53
CMTM1-216ENST00000533078 IL17BQ9UHF5 180 aa11.74□□□□□ -0.53
CMTM1-216ENST00000533078 KLF15Q9UIH9 416 aa11.74□□□□□ -0.53
CMTM1-216ENST00000533078 KIF26BQ2KJY2 2108 aa11.74□□□□□ -0.53
CMTM1-216ENST00000533078 IGLV3-10A0A075B6K4 115 aa11.73□□□□□ -0.53
CMTM1-216ENST00000533078 CXorf51AA0A1B0GTR3 108 aa11.73□□□□□ -0.53
CMTM1-216ENST00000533078 A0A1W2PNU3 283 aaPredicted RBP11.73□□□□□ -0.53
CMTM1-216ENST00000533078 KRIT1O00522 736 aa11.73□□□□□ -0.53
CMTM1-216ENST00000533078 YY2O15391 372 aa11.73□□□□□ -0.53
CMTM1-216ENST00000533078 SPINT1O43278 529 aa11.73□□□□□ -0.53
CMTM1-216ENST00000533078 CD44P16070 742 aaKnown RBP11.73□□□□□ -0.53
CMTM1-216ENST00000533078 XPAP23025 273 aaPredicted RBP11.73□□□□□ -0.53
CMTM1-216ENST00000533078 SLC5A2P31639 672 aa11.73□□□□□ -0.53
CMTM1-216ENST00000533078 STX17P56962 302 aa11.73□□□□□ -0.53
CMTM1-216ENST00000533078 GNA12Q03113 381 aa11.73□□□□□ -0.53
CMTM1-216ENST00000533078 DRAP1Q14919 205 aaPredicted RBP11.73□□□□□ -0.53
CMTM1-216ENST00000533078 SLC25A52Q3SY17 297 aa11.73□□□□□ -0.53
CMTM1-216ENST00000533078 MANEAQ5SRI9 462 aa11.73□□□□□ -0.53
CMTM1-216ENST00000533078 LVRNQ6Q4G3 990 aa11.73□□□□□ -0.53
CMTM1-216ENST00000533078 TTC7BQ86TV6 843 aa11.73□□□□□ -0.53
CMTM1-216ENST00000533078 GKN2Q86XP6 184 aa11.73□□□□□ -0.53
CMTM1-216ENST00000533078 ZNF354CQ86Y25 554 aa11.73□□□□□ -0.53
CMTM1-216ENST00000533078 DRC7Q8IY82 874 aa11.73□□□□□ -0.53
CMTM1-216ENST00000533078 SDR16C5Q8N3Y7 309 aa11.73□□□□□ -0.53
CMTM1-216ENST00000533078 WDTC1Q8N5D0 677 aa11.73□□□□□ -0.53
CMTM1-216ENST00000533078 TMEM35BQ8NCS4 154 aa11.73□□□□□ -0.53
CMTM1-216ENST00000533078 KLF6Q99612 283 aaPredicted RBP11.73□□□□□ -0.53
CMTM1-216ENST00000533078 AKAP7Q9P0M2 348 aaPredicted RBP11.73□□□□□ -0.53
CMTM1-216ENST00000533078 SIRPGQ9P1W8 387 aa11.73□□□□□ -0.53
CMTM1-216ENST00000533078 FCF1Q9Y324 198 aaKnown RBP11.73□□□□□ -0.53
CMTM1-216ENST00000533078 TMEM110-MUSTN1A8MSY1 372 aa11.72□□□□□ -0.53
CMTM1-216ENST00000533078 D6RAR5 112 aa11.72□□□□□ -0.53
CMTM1-216ENST00000533078 ZNF821O75541 412 aaPredicted RBP11.72□□□□□ -0.53
CMTM1-216ENST00000533078 GCATO75600 419 aa11.72□□□□□ -0.53
CMTM1-216ENST00000533078 POP4O95707 220 aaKnown RBP11.72□□□□□ -0.53
CMTM1-216ENST00000533078 GSRP00390 522 aa11.72□□□□□ -0.53
CMTM1-216ENST00000533078 UGT2B4P06133 528 aa11.72□□□□□ -0.53
CMTM1-216ENST00000533078 LIPCP11150 499 aa11.72□□□□□ -0.53
CMTM1-216ENST00000533078 TSHRP16473 764 aa11.72□□□□□ -0.53
CMTM1-216ENST00000533078 UGT1A5P35504 534 aa11.72□□□□□ -0.53
CMTM1-216ENST00000533078 SCNN1AP37088 669 aa11.72□□□□□ -0.53
CMTM1-216ENST00000533078 EIF4A3P38919 411 aaKnown RBP11.72□□□□□ -0.53
CMTM1-216ENST00000533078 ABL2P42684 1182 aa11.72□□□□□ -0.53
CMTM1-216ENST00000533078 ARF5P84085 180 aa11.72□□□□□ -0.53
CMTM1-216ENST00000533078 PTPN20Q4JDL3 420 aa11.72□□□□□ -0.53
CMTM1-216ENST00000533078 GJB7Q6PEY0 223 aa11.72□□□□□ -0.53
CMTM1-216ENST00000533078 HID1Q8IV36 788 aa11.72□□□□□ -0.53
CMTM1-216ENST00000533078 ELOA2Q8IYF1 753 aaPredicted RBP11.72□□□□□ -0.53
CMTM1-216ENST00000533078 ZNF683Q8IZ20 524 aa11.72□□□□□ -0.53
CMTM1-216ENST00000533078 OR2AP1Q8NGE2 309 aa11.72□□□□□ -0.53
CMTM1-216ENST00000533078 OR6K2Q8NGY2 324 aa11.72□□□□□ -0.53
CMTM1-216ENST00000533078 SHC3Q92529 594 aa11.72□□□□□ -0.53
CMTM1-216ENST00000533078 CCDC74AQ96AQ1 378 aa11.72□□□□□ -0.53
CMTM1-216ENST00000533078 TMEM159Q96B96 161 aa11.72□□□□□ -0.53
CMTM1-216ENST00000533078 C18orf8Q96DM3 657 aa11.72□□□□□ -0.53
CMTM1-216ENST00000533078 TBCBQ99426 244 aa11.72□□□□□ -0.53
CMTM1-216ENST00000533078 CPEB1Q9BZB8 566 aaKnown RBP11.72□□□□□ -0.53
CMTM1-216ENST00000533078 TRIM4Q9C037 500 aa11.72□□□□□ -0.53
CMTM1-216ENST00000533078 RETREG1Q9H6L5 497 aa11.72□□□□□ -0.53
CMTM1-216ENST00000533078 CAAP1Q9H8G2 361 aa11.72□□□□□ -0.53
CMTM1-216ENST00000533078 PPARGC1AQ9UBK2 798 aaKnown RBP11.72□□□□□ -0.53
CMTM1-216ENST00000533078 PISDQ9UG56 409 aa11.72□□□□□ -0.53
CMTM1-216ENST00000533078 SEPT3Q9UH03 358 aa11.72□□□□□ -0.53
CMTM1-216ENST00000533078 SNX10Q9Y5X0 201 aa11.72□□□□□ -0.53
CMTM1-216ENST00000533078 AHCTF1Q8WYP5 2266 aa11.72□□□□□ -0.53
CMTM1-216ENST00000533078 ZSCAN5CA6NGD5 496 aaPredicted RBP11.71□□□□□ -0.53
CMTM1-216ENST00000533078 BECN2A8MW95 431 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms