RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 DNAJC17Q9NVM6 304 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-222ENST00000531967 CFAP97Q9P2B7 532 aa5.34□□□□□ -1.55
ECHDC1-222ENST00000531967 GMEB2Q9UKD1 530 aa5.34□□□□□ -1.55
ECHDC1-222ENST00000531967 R3HDM2Q9Y2K5 976 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-222ENST00000531967 ACEP12821 1306 aa5.34□□□□□ -1.56
ECHDC1-222ENST00000531967 EIF3CLB5ME19 914 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 GPR25O00155 361 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 DLL1O00548 723 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 KRT6BP04259 564 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 KRT8P05787 483 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 GRPP07492 148 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 STAG3L3P0CL85 134 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 CA8P35219 290 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 GATA4P43694 442 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 PTDSS1P48651 473 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 KRT6CP48668 564 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 CLCNKBP51801 687 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 PGM5Q15124 567 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 IGSF11Q5DX21 431 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 CFAP157Q5JU67 520 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 ABLIM2Q6H8Q1 611 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 MTSS1LQ765P7 747 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 SMYD4Q8IYR2 804 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 LRRC39Q96DD0 335 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 EEF2KMTQ96G04 330 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 TPD52L3Q96J77 140 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 KLHL15Q96M94 604 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 C5orf34Q96MH7 638 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 ZBTB18Q99592 522 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 EIF3CQ99613 913 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 LDAHQ9H6V9 325 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 GPR108Q9NPR9 543 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 KLC4Q9NSK0 619 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 FTSJ1Q9UET6 329 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 KCNH3Q9ULD8 1083 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 HPSEQ9Y251 543 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 PCDHB2Q9Y5E7 798 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 MYO3BQ8WXR4 1341 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 ARHGAP35Q9NRY4 1499 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 LOC102723996A0A087X1L8 192 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 A0A0A6YYJ9 748 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 GSAPA4D1B5 854 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 TRIM49BA6NDI0 452 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 SLC38A8A6NNN8 435 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 F8WDY8 70 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 QSOX1O00391 747 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 MED7O43513 233 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 CCNT2O60583 730 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 GDF11O95390 407 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 NTRK1P04629 796 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 GALTP07902 379 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 TROVE2P10155 538 aaKnown RBP eCLIP5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 CD27P26842 260 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 MAP4P27816 1152 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 NF2P35240 595 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 PNPLA4P41247 253 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 PER3P56645 1201 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 GSCP56915 257 aaPredicted RBP5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 ABATP80404 500 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 SPIBQ01892 262 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 NIPAL4Q0D2K0 466 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 LAMB3Q13751 1172 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 GIT2Q14161 759 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 GAB4Q2WGN9 574 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 FUT11Q495W5 492 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 SH2D4BQ5SQS7 431 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 MIS18BP1Q6P0N0 1132 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 CES3Q6UWW8 571 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 HAUS6Q7Z4H7 955 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 COMTD1Q86VU5 262 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 TRIM58Q8NG06 486 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 WDR48Q8TAF3 677 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 ANKRD7Q92527 254 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 MCRS1Q96EZ8 462 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 SECISBP2Q96T21 854 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 RTN4RQ9BZR6 473 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 TMEM117Q9H0C3 514 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 OSGEPL1Q9H4B0 414 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 HDAC6Q9UBN7 1215 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 DNPEPQ9ULA0 475 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 NFU1Q9UMS0 254 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 PLEKHM1Q9Y4G2 1056 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 AOX1Q06278 1338 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 DHX29Q7Z478 1369 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 CCNB3Q8WWL7 1395 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 FHAD1B1AJZ9 1412 aa5.33□□□□□ -1.56
ECHDC1-222ENST00000531967 TEX13CA0A0J9YWL9 993 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 ELOVL7A1L3X0 281 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 SH3D21A4FU49 640 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 H0Y8G0 127 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 DNALI1O14645 258 aaPredicted RBP5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 CLIC2O15247 247 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 EIF3DO15371 548 aaKnown RBP eCLIP5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 ZSCAN9O15535 394 aaPredicted RBP5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 PAGE4O60829 102 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 GPR32O75388 356 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 CTAG2O75638 210 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 HEXIM1O94992 359 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 CD19P15391 556 aa5.32□□□□□ -1.56
ECHDC1-222ENST00000531967 CPOXP36551 454 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms