RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 ZHX1Q9UKY1 873 aaPredicted RBP4.8□□□□□ -1.64
CSDE1-211ENST00000525970 MKLN1Q9UL63 735 aa4.8□□□□□ -1.64
CSDE1-211ENST00000525970 A0A0U1RQG5 324 aaPredicted RBP4.79□□□□□ -1.64
CSDE1-211ENST00000525970 A0A1W2PRG0 241 aa4.79□□□□□ -1.64
CSDE1-211ENST00000525970 FAM170AA1A519 330 aa4.79□□□□□ -1.64
CSDE1-211ENST00000525970 OR6C68A6NDL8 312 aa4.79□□□□□ -1.64
CSDE1-211ENST00000525970 FAM90A8PA6NJQ4 464 aa4.79□□□□□ -1.64
CSDE1-211ENST00000525970 KCNJ18B7U540 433 aa4.79□□□□□ -1.64
CSDE1-211ENST00000525970 CLIC1O00299 241 aa4.79□□□□□ -1.64
CSDE1-211ENST00000525970 MT-CO3P00414 261 aa4.79□□□□□ -1.64
CSDE1-211ENST00000525970 PRKCGP05129 697 aa4.79□□□□□ -1.64
CSDE1-211ENST00000525970 FAM90A13PP0C7W8 464 aa4.79□□□□□ -1.64
CSDE1-211ENST00000525970 FAM90A24PP0C7X0 464 aa4.79□□□□□ -1.64
CSDE1-211ENST00000525970 SELLP14151 372 aa4.79□□□□□ -1.64
CSDE1-211ENST00000525970 GABRB1P18505 474 aa4.79□□□□□ -1.64
CSDE1-211ENST00000525970 MCM3P25205 808 aa4.79□□□□□ -1.64
CSDE1-211ENST00000525970 IDUAP35475 653 aa4.79□□□□□ -1.64
CSDE1-211ENST00000525970 PPP5CP53041 499 aa4.79□□□□□ -1.64
CSDE1-211ENST00000525970 COPB1P53618 953 aaKnown RBP4.79□□□□□ -1.64
CSDE1-211ENST00000525970 CDH8P55286 799 aa4.79□□□□□ -1.64
CSDE1-211ENST00000525970 CSTF3Q12996 717 aaKnown RBP4.79□□□□□ -1.64
CSDE1-211ENST00000525970 MFSD13AQ14CX5 517 aa4.79□□□□□ -1.64
CSDE1-211ENST00000525970 PCLAFQ15004 111 aa4.79□□□□□ -1.64
CSDE1-211ENST00000525970 KYNUQ16719 465 aa4.79□□□□□ -1.64
CSDE1-211ENST00000525970 GLE1Q53GS7 698 aaKnown RBP4.79□□□□□ -1.64
CSDE1-211ENST00000525970 PRAMEF17Q5VTA0 474 aa4.79□□□□□ -1.64
CSDE1-211ENST00000525970 TMEM154Q6P9G4 183 aa4.79□□□□□ -1.64
CSDE1-211ENST00000525970 SERPINA13PQ6UXR4 307 aa4.79□□□□□ -1.64
CSDE1-211ENST00000525970 PRSS45Q7RTY3 260 aa4.79□□□□□ -1.64
CSDE1-211ENST00000525970 VSIG1Q86XK7 387 aa4.79□□□□□ -1.64
CSDE1-211ENST00000525970 PAQR4Q8N4S7 273 aaPredicted RBP4.79□□□□□ -1.64
CSDE1-211ENST00000525970 OR52N4Q8NGI2 321 aa4.79□□□□□ -1.64
CSDE1-211ENST00000525970 PSPC1Q8WXF1 523 aaKnown RBP4.79□□□□□ -1.64
CSDE1-211ENST00000525970 SLC22A18Q96BI1 424 aa4.79□□□□□ -1.64
CSDE1-211ENST00000525970 REPS1Q96D71 796 aa4.79□□□□□ -1.64
CSDE1-211ENST00000525970 ZNF347Q96SE7 839 aa4.79□□□□□ -1.64
CSDE1-211ENST00000525970 FRMD8Q9BZ67 464 aaPredicted RBP4.79□□□□□ -1.64
CSDE1-211ENST00000525970 CCDC177Q9NQR7 707 aaPredicted RBP4.79□□□□□ -1.64
CSDE1-211ENST00000525970 SNTG1Q9NSN8 517 aa4.79□□□□□ -1.64
CSDE1-211ENST00000525970 NLKQ9UBE8 527 aa4.79□□□□□ -1.64
CSDE1-211ENST00000525970 A4GNTQ9UNA3 340 aa4.79□□□□□ -1.64
CSDE1-211ENST00000525970 FAM169AQ9Y6X4 670 aa4.79□□□□□ -1.64
CSDE1-211ENST00000525970 ADGRF5Q8IZF2 1346 aa4.78□□□□□ -1.64
CSDE1-211ENST00000525970 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.78□□□□□ -1.64
CSDE1-211ENST00000525970 CBY3A6NI87 242 aa4.78□□□□□ -1.64
CSDE1-211ENST00000525970 TSPY2A6NKD2 308 aa4.78□□□□□ -1.64
CSDE1-211ENST00000525970 BTBD18B2RXH4 712 aa4.78□□□□□ -1.64
CSDE1-211ENST00000525970 USP12O75317 370 aa4.78□□□□□ -1.64
CSDE1-211ENST00000525970 HSPA4LO95757 839 aa4.78□□□□□ -1.64
CSDE1-211ENST00000525970 SERPINC1P01008 464 aa4.78□□□□□ -1.64
CSDE1-211ENST00000525970 ENO1P06733 434 aaKnown RBP4.78□□□□□ -1.64
CSDE1-211ENST00000525970 CELA2AP08217 269 aa4.78□□□□□ -1.64
CSDE1-211ENST00000525970 PRR35P0CG20 571 aa4.78□□□□□ -1.64
CSDE1-211ENST00000525970 TSPY3P0CV98 308 aa4.78□□□□□ -1.64
CSDE1-211ENST00000525970 TSPY8P0CW00 308 aa4.78□□□□□ -1.64
CSDE1-211ENST00000525970 TSPY1Q01534 308 aa4.78□□□□□ -1.64
CSDE1-211ENST00000525970 LRMPQ12912 555 aa4.78□□□□□ -1.64
CSDE1-211ENST00000525970 LARS2Q15031 903 aaKnown RBP4.78□□□□□ -1.64
CSDE1-211ENST00000525970 TAF11Q15544 211 aa4.78□□□□□ -1.64
CSDE1-211ENST00000525970 DPCR1Q3MIW9 517 aa4.78□□□□□ -1.64
CSDE1-211ENST00000525970 SERTAD4-AS1Q5TG53 156 aa4.78□□□□□ -1.64
CSDE1-211ENST00000525970 JADE1Q6IE81 842 aa4.78□□□□□ -1.64
CSDE1-211ENST00000525970 ZNF425Q6IV72 752 aa4.78□□□□□ -1.64
CSDE1-211ENST00000525970 FAM160B2Q86V87 743 aa4.78□□□□□ -1.64
CSDE1-211ENST00000525970 LINC00346Q8IVM7 164 aa4.78□□□□□ -1.64
CSDE1-211ENST00000525970 TTC30BQ8N4P2 665 aa4.78□□□□□ -1.64
CSDE1-211ENST00000525970 PNLDC1Q8NA58 520 aaKnown RBP4.78□□□□□ -1.64
CSDE1-211ENST00000525970 CELF1Q92879 486 aaKnown RBP4.78□□□□□ -1.64
CSDE1-211ENST00000525970 JAKMIP2Q96AA8 810 aa4.78□□□□□ -1.64
CSDE1-211ENST00000525970 MMABQ96EY8 250 aaPredicted RBP4.78□□□□□ -1.64
CSDE1-211ENST00000525970 HIC2Q96JB3 615 aa4.78□□□□□ -1.64
CSDE1-211ENST00000525970 CNDP2Q96KP4 475 aaKnown RBP4.78□□□□□ -1.64
CSDE1-211ENST00000525970 C1orf74Q96LT6 269 aa4.78□□□□□ -1.64
CSDE1-211ENST00000525970 ABHD14AQ9BUJ0 271 aa4.78□□□□□ -1.64
CSDE1-211ENST00000525970 MAK16Q9BXY0 300 aaKnown RBP4.78□□□□□ -1.64
CSDE1-211ENST00000525970 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.78□□□□□ -1.649e-6■■□□□ 13.2
CSDE1-211ENST00000525970 PLEKHA4Q9H4M7 779 aa4.78□□□□□ -1.64
CSDE1-211ENST00000525970 ATP8A2Q9NTI2 1148 aa4.78□□□□□ -1.64
CSDE1-211ENST00000525970 ARL15Q9NXU5 204 aa4.78□□□□□ -1.64
CSDE1-211ENST00000525970 C5AR2Q9P296 337 aa4.78□□□□□ -1.64
CSDE1-211ENST00000525970 MARCH4Q9P2E8 410 aaPredicted RBP4.78□□□□□ -1.64
CSDE1-211ENST00000525970 FBXO40Q9UH90 709 aa4.78□□□□□ -1.64
CSDE1-211ENST00000525970 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.78□□□□□ -1.64
CSDE1-211ENST00000525970 TCRBV5S1A1TA0A578 114 aa4.77□□□□□ -1.65
CSDE1-211ENST00000525970 TBX10O75333 385 aa4.77□□□□□ -1.65
CSDE1-211ENST00000525970 HLA-DQA2P01906 255 aa4.77□□□□□ -1.65
CSDE1-211ENST00000525970 TUBBP07437 444 aa4.77□□□□□ -1.65
CSDE1-211ENST00000525970 FCGR2AP12318 317 aa4.77□□□□□ -1.65
CSDE1-211ENST00000525970 SOX2P48431 317 aa4.77□□□□□ -1.65
CSDE1-211ENST00000525970 VPS41P49754 854 aa4.77□□□□□ -1.65
CSDE1-211ENST00000525970 TFF2Q03403 129 aa4.77□□□□□ -1.65
CSDE1-211ENST00000525970 SLC14A1Q13336 389 aa4.77□□□□□ -1.65
CSDE1-211ENST00000525970 SCARB2Q14108 478 aa4.77□□□□□ -1.65
CSDE1-211ENST00000525970 PLCB4Q15147 1175 aa4.77□□□□□ -1.65
CSDE1-211ENST00000525970 RNPS1Q15287 305 aaKnown RBP4.77□□□□□ -1.65
CSDE1-211ENST00000525970 TMEM266Q2M3C6 531 aa4.77□□□□□ -1.65
CSDE1-211ENST00000525970 ALG11Q2TAA5 492 aa4.77□□□□□ -1.65
CSDE1-211ENST00000525970 PLK5Q496M5 336 aa4.77□□□□□ -1.65
CSDE1-211ENST00000525970 BMP2KLQ5H9B9 411 aa4.77□□□□□ -1.65
CSDE1-211ENST00000525970 GKAP1Q5VSY0 366 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms