RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 TCP11X1B4DZS4 312 aa9.06□□□□□ -0.96
TRAPPC9-212ENST00000521944 ALOX15BO15296 676 aa9.06□□□□□ -0.96
TRAPPC9-212ENST00000521944 PCDH8O95206 1070 aa9.06□□□□□ -0.96
TRAPPC9-212ENST00000521944 MT-CO1P00395 513 aa9.06□□□□□ -0.96
TRAPPC9-212ENST00000521944 ANXA6P08133 673 aa9.06□□□□□ -0.96
TRAPPC9-212ENST00000521944 PDGFRAP16234 1089 aa9.06□□□□□ -0.96
TRAPPC9-212ENST00000521944 SLC11A2P49281 568 aa9.06□□□□□ -0.96
TRAPPC9-212ENST00000521944 PLK1P53350 603 aa9.06□□□□□ -0.96
TRAPPC9-212ENST00000521944 CDC20Q12834 499 aa9.06□□□□□ -0.96
TRAPPC9-212ENST00000521944 RNF219Q5W0B1 726 aaPredicted RBP9.06□□□□□ -0.96
TRAPPC9-212ENST00000521944 MCTP1Q6DN14 999 aa9.06□□□□□ -0.96
TRAPPC9-212ENST00000521944 TCTN3Q6NUS6 607 aa9.06□□□□□ -0.96
TRAPPC9-212ENST00000521944 ESRP1Q6NXG1 681 aaKnown RBP9.06□□□□□ -0.96
TRAPPC9-212ENST00000521944 NLRP8Q86W28 1048 aa9.06□□□□□ -0.96
TRAPPC9-212ENST00000521944 CCNJLQ8IV13 435 aa9.06□□□□□ -0.96
TRAPPC9-212ENST00000521944 PHACTR4Q8IZ21 702 aa9.06□□□□□ -0.96
TRAPPC9-212ENST00000521944 IL22RA1Q8N6P7 574 aa9.06□□□□□ -0.96
TRAPPC9-212ENST00000521944 Q8N9G6 341 aaPredicted RBP9.06□□□□□ -0.96
TRAPPC9-212ENST00000521944 OR2A12Q8NGT7 310 aa9.06□□□□□ -0.96
TRAPPC9-212ENST00000521944 PCDH19Q8TAB3 1148 aa9.06□□□□□ -0.96
TRAPPC9-212ENST00000521944 GPBAR1Q8TDU6 330 aa9.06□□□□□ -0.96
TRAPPC9-212ENST00000521944 PDCD6IPQ8WUM4 868 aaKnown RBP9.06□□□□□ -0.96
TRAPPC9-212ENST00000521944 TBATAQ96M53 351 aa9.06□□□□□ -0.96
TRAPPC9-212ENST00000521944 RUBCNLQ9H714 662 aa9.06□□□□□ -0.96
TRAPPC9-212ENST00000521944 PCDHGA3Q9Y5H0 932 aa9.06□□□□□ -0.96
TRAPPC9-212ENST00000521944 B3GALT1Q9Y5Z6 326 aa9.06□□□□□ -0.96
TRAPPC9-212ENST00000521944 ARHGEF17Q96PE2 2063 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 TNRC6AQ8NDV7 1962 aaKnown RBP9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 EFCAB7A8K855 629 aa9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 C1QTNF3-AMACRE9PGA6 284 aa9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 CNTN5O94779 1100 aa9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 MOCS3O95396 460 aa9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 RPN1P04843 607 aaKnown RBP9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 FYNP06241 537 aa9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 CD58P19256 250 aa9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 TCEA2Q15560 299 aa9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 ARHGAP44Q17R89 818 aa9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 ZNF394Q53GI3 561 aa9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 ARSJQ5FYB0 599 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 RRAGBQ5VZM2 374 aa9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 KCTD16Q68DU8 428 aa9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 CXorf57Q6NSI4 855 aaKnown RBP9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 ASB18Q6ZVZ8 466 aa9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 CIR1Q86X95 450 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 UNC45BQ8IWX7 931 aa9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 UNC5BQ8IZJ1 945 aa9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 CACNA2D3Q8IZS8 1091 aa9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 ANKRD52Q8NB46 1076 aa9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 SLC4A11Q8NBS3 891 aa9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 CHST14Q8NCH0 376 aa9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 GPR156Q8NFN8 814 aa9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 RNF139Q8WU17 664 aa9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 BTN2A2Q8WVV5 523 aa9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 CENPTQ96BT3 561 aa9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 SLC39A13Q96H72 371 aa9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 HEXIM2Q96MH2 286 aaKnown RBP9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 LENG8Q96PV6 779 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 HDAC8Q9BY41 377 aa9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 TSPAN10Q9H1Z9 355 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 DKK3Q9UBP4 350 aa9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 IPO11Q9UI26 975 aaKnown RBP9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 APPL1Q9UKG1 709 aa9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 OR51B4Q9Y5P0 310 aa9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 KCNMB2Q9Y691 235 aa9.05□□□□□ -0.96
TRAPPC9-212ENST00000521944 LOC101059948A0A1B0GTJ6 334 aa9.04□□□□□ -0.96
TRAPPC9-212ENST00000521944 IGLON5A6NGN9 336 aa9.04□□□□□ -0.96
TRAPPC9-212ENST00000521944 K7ERQ8 282 aa9.04□□□□□ -0.96
TRAPPC9-212ENST00000521944 KPNA3O00505 521 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC9-212ENST00000521944 EIF3DO15371 548 aaKnown RBP eCLIP9.04□□□□□ -0.96
TRAPPC9-212ENST00000521944 B4GAT1O43505 415 aa9.04□□□□□ -0.96
TRAPPC9-212ENST00000521944 HLA-DRAP01903 254 aa9.04□□□□□ -0.96
TRAPPC9-212ENST00000521944 P4HA1P13674 534 aa9.04□□□□□ -0.96
TRAPPC9-212ENST00000521944 CHRNA3P32297 505 aa9.04□□□□□ -0.96
TRAPPC9-212ENST00000521944 NNMTP40261 264 aa9.04□□□□□ -0.96
TRAPPC9-212ENST00000521944 RECQLP46063 649 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC9-212ENST00000521944 AP3M2P53677 418 aa9.04□□□□□ -0.96
TRAPPC9-212ENST00000521944 RAD23BP54727 409 aa9.04□□□□□ -0.96
TRAPPC9-212ENST00000521944 TBX4P57082 545 aa9.04□□□□□ -0.96
TRAPPC9-212ENST00000521944 ADIGQ0VDE8 80 aa9.04□□□□□ -0.96
TRAPPC9-212ENST00000521944 ACCSLQ4AC99 568 aa9.04□□□□□ -0.96
TRAPPC9-212ENST00000521944 PRR30Q53SZ7 412 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC9-212ENST00000521944 PHF19Q5T6S3 580 aa9.04□□□□□ -0.96
TRAPPC9-212ENST00000521944 ARHGAP17Q68EM7 881 aa9.04□□□□□ -0.96
TRAPPC9-212ENST00000521944 ERN2Q76MJ5 926 aaKnown RBP9.04□□□□□ -0.96
TRAPPC9-212ENST00000521944 SPRED1Q7Z699 444 aa9.04□□□□□ -0.96
TRAPPC9-212ENST00000521944 XYLT1Q86Y38 959 aa9.04□□□□□ -0.96
TRAPPC9-212ENST00000521944 CCDC117Q8IWD4 279 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC9-212ENST00000521944 NELFCDQ8IXH7 590 aa9.04□□□□□ -0.96
TRAPPC9-212ENST00000521944 C12orf56Q8IXR9 622 aa9.04□□□□□ -0.96
TRAPPC9-212ENST00000521944 LGI2Q8N0V4 545 aa9.04□□□□□ -0.96
TRAPPC9-212ENST00000521944 SH2D3CQ8N5H7 860 aa9.04□□□□□ -0.96
TRAPPC9-212ENST00000521944 RCBTB1Q8NDN9 531 aa9.04□□□□□ -0.96
TRAPPC9-212ENST00000521944 TMIEQ8NEW7 156 aa9.04□□□□□ -0.96
TRAPPC9-212ENST00000521944 TAF4BQ92750 862 aa9.04□□□□□ -0.96
TRAPPC9-212ENST00000521944 ERCC4Q92889 916 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC9-212ENST00000521944 CLIC6Q96NY7 704 aa9.04□□□□□ -0.96
TRAPPC9-212ENST00000521944 TAAR9Q96RI9 348 aa9.04□□□□□ -0.96
TRAPPC9-212ENST00000521944 PANK2Q9BZ23 570 aa9.04□□□□□ -0.96
TRAPPC9-212ENST00000521944 UNKQ9C0B0 810 aaKnown RBP9.04□□□□□ -0.96
TRAPPC9-212ENST00000521944 CYP3A43Q9HB55 503 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms