RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 LRRN4CLQ8ND94 238 aa12.23□□□□□ -0.45
ERGIC1-208ENST00000520399 ITPKCQ96DU7 683 aa12.23□□□□□ -0.45
ERGIC1-208ENST00000520399 RNF38Q9H0F5 515 aa12.23□□□□□ -0.45
ERGIC1-208ENST00000520399 DNAJC18Q9H819 358 aa12.23□□□□□ -0.45
ERGIC1-208ENST00000520399 RRAGCQ9HB90 399 aa12.23□□□□□ -0.45
ERGIC1-208ENST00000520399 ATRNO75882 1429 aa12.23□□□□□ -0.45
ERGIC1-208ENST00000520399 SERPINE1P05121 402 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 CCNA2P20248 432 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 GNG2P59768 71 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 SKP1P63208 163 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 ZBTB49Q6ZSB9 765 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 NET1Q7Z628 596 aaPredicted RBP12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 DNAJC5Q9H3Z4 198 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 POPDC2Q9HBU9 364 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 DNPEPQ9ULA0 475 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 ASTN1O14525 1302 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 UBDO15205 165 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 TPST1O60507 370 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 FAM153BP0C7A2 387 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 MYL4P12829 197 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 TPH1P17752 444 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 CDH8P55286 799 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 FAM153CQ494X1 144 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 HMBOX1Q6NT76 420 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 ZCCHC9Q8N567 271 aaKnown RBP12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 TMEM237Q96Q45 408 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 CMTM6Q9NX76 183 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 ZMYM2Q9UBW7 1377 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 A0A0X1KG70 313 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 PTPN3P26045 913 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 MIPP30301 263 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 ADCYAP1R1P41586 468 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 NUMBP49757 651 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 GJA9P57773 515 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 PPIL2Q13356 520 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 USP50Q70EL3 339 aaPredicted RBP12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 DEFB128Q7Z7B8 93 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 DSN1Q9H410 356 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 ARHGAP28Q9P2N2 729 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 NDOR1Q9UHB4 597 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 USP20Q9Y2K6 914 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 SNX13Q9Y5W8 968 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 NCANO14594 1321 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 A0A087X1B8 175 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 APOC1P02654 83 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 UBA1P22314 1058 aaKnown RBP12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 CBX5P45973 191 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 RIPPLY1Q0D2K3 151 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 FSCN1Q16658 493 aaKnown RBP12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 ZC3H12AQ5D1E8 599 aaKnown RBP12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 SERPINF2P08697 491 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 NAT1P18440 290 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 TNFRSF8P28908 595 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 OR1E1P30953 314 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 ZNF135P52742 658 aaPredicted RBP12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 RHBDL3P58872 404 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 AP1S1P61966 158 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 GTF2BQ00403 316 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 AMPD2Q01433 879 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 RRP1BQ14684 758 aaKnown RBP12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 ABRAXAS1Q6UWZ7 409 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 CCDC36Q8IYA8 594 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 SPACA7Q96KW9 195 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 DHRS1Q96LJ7 313 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 MRPL9Q9BYD2 267 aaKnown RBP12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 NMRAL1Q9HBL8 299 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 TMEM138Q9NPI0 162 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 PFDN2Q9UHV9 154 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 UBIAD1Q9Y5Z9 338 aa12.22□□□□□ -0.45
ERGIC1-208ENST00000520399 C3P01024 1663 aa12.21□□□□□ -0.45
ERGIC1-208ENST00000520399 APOC4-APOC2K7ER74 178 aa12.21□□□□□ -0.45
ERGIC1-208ENST00000520399 KHDRBS3O75525 346 aaKnown RBP12.21□□□□□ -0.45
ERGIC1-208ENST00000520399 APOC2P02655 101 aa12.21□□□□□ -0.45
ERGIC1-208ENST00000520399 MSH3P20585 1137 aa12.21□□□□□ -0.45
ERGIC1-208ENST00000520399 SRP54P61011 504 aaKnown RBP12.21□□□□□ -0.45
ERGIC1-208ENST00000520399 FAM171A1Q5VUB5 890 aa12.21□□□□□ -0.45
ERGIC1-208ENST00000520399 RNF43Q68DV7 783 aa12.21□□□□□ -0.45
ERGIC1-208ENST00000520399 CYP4V2Q6ZWL3 525 aaPredicted RBP12.21□□□□□ -0.45
ERGIC1-208ENST00000520399 TFAP2DQ7Z6R9 452 aa12.21□□□□□ -0.45
ERGIC1-208ENST00000520399 PJA1Q8NG27 643 aa12.21□□□□□ -0.45
ERGIC1-208ENST00000520399 TCP10LQ8TDR4 215 aa12.21□□□□□ -0.45
ERGIC1-208ENST00000520399 CENPIQ92674 756 aaPredicted RBP12.21□□□□□ -0.45
ERGIC1-208ENST00000520399 EPB41L4BQ9H329 900 aa12.21□□□□□ -0.45
ERGIC1-208ENST00000520399 EBF2Q9HAK2 575 aa12.21□□□□□ -0.45
ERGIC1-208ENST00000520399 XPNPEP3Q9NQH7 507 aa12.21□□□□□ -0.45
ERGIC1-208ENST00000520399 BTNL10A8MVZ5 291 aa12.21□□□□□ -0.45
ERGIC1-208ENST00000520399 TISP43B9A030 160 aa12.21□□□□□ -0.45
ERGIC1-208ENST00000520399 E5RJQ4 531 aa12.21□□□□□ -0.45
ERGIC1-208ENST00000520399 TRDMT1O14717 391 aaKnown RBP12.21□□□□□ -0.45
ERGIC1-208ENST00000520399 SSNA1O43805 119 aa12.21□□□□□ -0.45
ERGIC1-208ENST00000520399 TSPAN3O60637 253 aa12.21□□□□□ -0.45
ERGIC1-208ENST00000520399 ALADP13716 330 aa12.21□□□□□ -0.45
ERGIC1-208ENST00000520399 KDELR1P24390 212 aa12.21□□□□□ -0.45
ERGIC1-208ENST00000520399 VBP1P61758 197 aa12.21□□□□□ -0.45
ERGIC1-208ENST00000520399 MAD2L1Q13257 205 aaPredicted RBP12.21□□□□□ -0.45
ERGIC1-208ENST00000520399 DPYSL3Q14195 570 aa12.21□□□□□ -0.45
ERGIC1-208ENST00000520399 SLC39A12Q504Y0 691 aa12.21□□□□□ -0.45
ERGIC1-208ENST00000520399 CREG2Q8IUH2 290 aa12.21□□□□□ -0.45
ERGIC1-208ENST00000520399 SETD9Q8NE22 299 aa12.21□□□□□ -0.45
ERGIC1-208ENST00000520399 CDCA5Q96FF9 252 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms