RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 AP1G1O43747 822 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 PRPSAP2O60256 369 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 BUB1BO60566 1050 aaPredicted RBP9.48□□□□□ -0.89
HDAC3-215ENST00000519474 DKK1O94907 266 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 FTH1P19P0C7X4 201 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 RARAP10276 462 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 PRLRP16471 622 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 DESP17661 470 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 AMPD1P23109 780 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 ITGB7P26010 798 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 PCK1P35558 622 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 EIF4A3P38919 411 aaKnown RBP9.48□□□□□ -0.89
HDAC3-215ENST00000519474 ABL2P42684 1182 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 CLDN2P57739 230 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 OVGP1Q12889 678 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 PIGHQ14442 188 aaPredicted RBP9.48□□□□□ -0.89
HDAC3-215ENST00000519474 ASTE1Q2TB18 679 aaPredicted RBP9.48□□□□□ -0.89
HDAC3-215ENST00000519474 ATP13A4Q4VNC1 1196 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 SETMARQ53H47 684 aaPredicted RBP9.48□□□□□ -0.89
HDAC3-215ENST00000519474 TDRD12Q587J7 1177 aaKnown RBP9.48□□□□□ -0.89
HDAC3-215ENST00000519474 SLC45A4Q5BKX6 768 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 GDPD4Q6W3E5 623 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 RFX8Q6ZV50 586 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 PARS2Q7L3T8 475 aaKnown RBP9.48□□□□□ -0.89
HDAC3-215ENST00000519474 KANSL1Q7Z3B3 1105 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 TTC7BQ86TV6 843 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 ZNF354CQ86Y25 554 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 RYBPQ8N488 228 aaPredicted RBP9.48□□□□□ -0.89
HDAC3-215ENST00000519474 OR8K1Q8NGG5 319 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 ARHGEF26Q96DR7 871 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 TRIM11Q96F44 468 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 PPP1R16AQ96I34 528 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 NSMCE3Q96MG7 304 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 EIF3CQ99613 913 aaKnown RBP9.48□□□□□ -0.89
HDAC3-215ENST00000519474 CDC6Q99741 560 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 NCAPGQ9BPX3 1015 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 C1QTNF2Q9BXJ5 285 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 CAAP1Q9H8G2 361 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 PDFQ9HBH1 243 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 GDF3Q9NR23 364 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 DONSONQ9NYP3 566 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 LHX3Q9UBR4 397 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 KLK13Q9UKR3 277 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 MSRB2Q9Y3D2 182 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.48□□□□□ -0.89
HDAC3-215ENST00000519474 SCINQ9Y6U3 715 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 TMEM131Q92545 1883 aa9.48□□□□□ -0.89
HDAC3-215ENST00000519474 POM121BA6NF01 834 aa9.47□□□□□ -0.89
HDAC3-215ENST00000519474 ARHGAP42A6NI28 874 aa9.47□□□□□ -0.89
HDAC3-215ENST00000519474 C1QTNF9BB2RNN3 333 aa9.47□□□□□ -0.89
HDAC3-215ENST00000519474 AREL1O15033 823 aa9.47□□□□□ -0.89
HDAC3-215ENST00000519474 RAD51BO15315 384 aa9.47□□□□□ -0.89
HDAC3-215ENST00000519474 SPINT1O43278 529 aa9.47□□□□□ -0.89
HDAC3-215ENST00000519474 MAGEC1O60732 1142 aa9.47□□□□□ -0.89
HDAC3-215ENST00000519474 PRAMEF11O60813 436 aa9.47□□□□□ -0.89
HDAC3-215ENST00000519474 TRIM16O95361 564 aa9.47□□□□□ -0.89
HDAC3-215ENST00000519474 UGT2B4P06133 528 aa9.47□□□□□ -0.89
HDAC3-215ENST00000519474 ITGAVP06756 1048 aa9.47□□□□□ -0.89
HDAC3-215ENST00000519474 C1QTNF9P0C862 333 aa9.47□□□□□ -0.89
HDAC3-215ENST00000519474 HNRNPA2B1P22626 353 aaKnown RBP9.47□□□□□ -0.89
HDAC3-215ENST00000519474 IL4RP24394 825 aa9.47□□□□□ -0.89
HDAC3-215ENST00000519474 RGRP47804 291 aa9.47□□□□□ -0.89
HDAC3-215ENST00000519474 CCT8P50990 548 aa9.47□□□□□ -0.89
HDAC3-215ENST00000519474 RHOAP61586 193 aa9.47□□□□□ -0.89
HDAC3-215ENST00000519474 RPS21P63220 83 aaKnown RBP9.47□□□□□ -0.89
HDAC3-215ENST00000519474 RAD51Q06609 339 aa9.47□□□□□ -0.89
HDAC3-215ENST00000519474 MAPK8IP2Q13387 824 aaPredicted RBP9.47□□□□□ -0.89
HDAC3-215ENST00000519474 PPP6R3Q5H9R7 873 aaPredicted RBP9.47□□□□□ -0.89
HDAC3-215ENST00000519474 ARHGAP36Q6ZRI8 547 aa9.47□□□□□ -0.89
HDAC3-215ENST00000519474 POLNQ7Z5Q5 900 aa9.47□□□□□ -0.89
HDAC3-215ENST00000519474 SLC25A45Q8N413 288 aa9.47□□□□□ -0.89
HDAC3-215ENST00000519474 OR13H1Q8NG92 308 aa9.47□□□□□ -0.89
HDAC3-215ENST00000519474 HCAR2Q8TDS4 363 aa9.47□□□□□ -0.89
HDAC3-215ENST00000519474 ASB12Q8WXK4 309 aa9.47□□□□□ -0.89
HDAC3-215ENST00000519474 GATA6Q92908 595 aa9.47□□□□□ -0.89
HDAC3-215ENST00000519474 RAB7BQ96AH8 199 aa9.47□□□□□ -0.89
HDAC3-215ENST00000519474 LENG8Q96PV6 779 aaPredicted RBP9.47□□□□□ -0.89
HDAC3-215ENST00000519474 KLF6Q99612 283 aaPredicted RBP9.47□□□□□ -0.89
HDAC3-215ENST00000519474 CHP1Q99653 195 aa9.47□□□□□ -0.89
HDAC3-215ENST00000519474 MYOCQ99972 504 aa9.47□□□□□ -0.89
HDAC3-215ENST00000519474 NUP85Q9BW27 656 aa9.47□□□□□ -0.89
HDAC3-215ENST00000519474 SUV39H2Q9H5I1 410 aa9.47□□□□□ -0.89
HDAC3-215ENST00000519474 ZWILCHQ9H900 591 aa9.47□□□□□ -0.89
HDAC3-215ENST00000519474 FZD3Q9NPG1 666 aa9.47□□□□□ -0.89
HDAC3-215ENST00000519474 ETNK2Q9NVF9 386 aa9.47□□□□□ -0.89
HDAC3-215ENST00000519474 DKK3Q9UBP4 350 aa9.47□□□□□ -0.89
HDAC3-215ENST00000519474 UBA2Q9UBT2 640 aaPredicted RBP9.47□□□□□ -0.89
HDAC3-215ENST00000519474 IP6K2Q9UHH9 426 aa9.47□□□□□ -0.89
HDAC3-215ENST00000519474 GGT7Q9UJ14 662 aa9.47□□□□□ -0.89
HDAC3-215ENST00000519474 APOBEC2Q9Y235 224 aaKnown RBP9.47□□□□□ -0.89
HDAC3-215ENST00000519474 TRPM6Q9BX84 2022 aa9.46□□□□□ -0.89
HDAC3-215ENST00000519474 TNFSF14O43557 240 aa9.46□□□□□ -0.9
HDAC3-215ENST00000519474 TSPAN6O43657 245 aa9.46□□□□□ -0.9
HDAC3-215ENST00000519474 MMP20O60882 483 aa9.46□□□□□ -0.9
HDAC3-215ENST00000519474 CAPNS1P04632 268 aa9.46□□□□□ -0.9
HDAC3-215ENST00000519474 PROS1P07225 676 aa9.46□□□□□ -0.9
HDAC3-215ENST00000519474 THEGLP0DJG4 465 aa9.46□□□□□ -0.9
HDAC3-215ENST00000519474 AKT2P31751 481 aa9.46□□□□□ -0.9
HDAC3-215ENST00000519474 GRK6P43250 576 aa9.46□□□□□ -0.9
HDAC3-215ENST00000519474 CSNK1DP48730 415 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms