RNA–Protein interactions for RNA: ENST00000514434.1

DDR1-275, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 514 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-275ENST00000514434 KNTC1P50748 2209 aa13.25□□□□□ -0.29
DDR1-275ENST00000514434 ARID1BQ8NFD5 2236 aaPredicted RBP13.24□□□□□ -0.29
DDR1-275ENST00000514434 CXorf51AA0A1B0GTR3 108 aa13.24□□□□□ -0.29
DDR1-275ENST00000514434 IGLON5A6NGN9 336 aa13.24□□□□□ -0.29
DDR1-275ENST00000514434 ARHGAP42A6NI28 874 aa13.24□□□□□ -0.29
DDR1-275ENST00000514434 MAGEC1O60732 1142 aa13.24□□□□□ -0.29
DDR1-275ENST00000514434 TRIM16O95361 564 aa13.24□□□□□ -0.29
DDR1-275ENST00000514434 PIGNO95427 931 aa13.24□□□□□ -0.29
DDR1-275ENST00000514434 ITIH2P19823 946 aa13.24□□□□□ -0.29
DDR1-275ENST00000514434 HNRNPA2B1P22626 353 aaKnown RBP13.24□□□□□ -0.29
DDR1-275ENST00000514434 IL1R2P27930 398 aa13.24□□□□□ -0.29
DDR1-275ENST00000514434 EPHA8P29322 1005 aaPredicted RBP13.24□□□□□ -0.29
DDR1-275ENST00000514434 HTR7P34969 479 aa13.24□□□□□ -0.29
DDR1-275ENST00000514434 NDST2P52849 883 aa13.24□□□□□ -0.29
DDR1-275ENST00000514434 RAD51Q06609 339 aa13.24□□□□□ -0.29
DDR1-275ENST00000514434 SGCGQ13326 291 aa13.24□□□□□ -0.29
DDR1-275ENST00000514434 FGL2Q14314 439 aa13.24□□□□□ -0.29
DDR1-275ENST00000514434 INAVAQ3KP66 663 aa13.24□□□□□ -0.29
DDR1-275ENST00000514434 TMEM259Q4ZIN3 620 aa13.24□□□□□ -0.29
DDR1-275ENST00000514434 INO80DQ53TQ3 878 aaPredicted RBP13.24□□□□□ -0.29
DDR1-275ENST00000514434 ALKBH5Q6P6C2 394 aaKnown RBP13.24□□□□□ -0.29
DDR1-275ENST00000514434 UNQ6494/PRO21346Q6UXR6 183 aa13.24□□□□□ -0.29
DDR1-275ENST00000514434 ARHGAP36Q6ZRI8 547 aa13.24□□□□□ -0.29
DDR1-275ENST00000514434 RAB44Q7Z6P3 723 aaPredicted RBP13.24□□□□□ -0.29
DDR1-275ENST00000514434 TTC7BQ86TV6 843 aa13.24□□□□□ -0.29
DDR1-275ENST00000514434 IQCHQ86VS3 1027 aa13.24□□□□□ -0.29
DDR1-275ENST00000514434 NPWQ8N729 165 aa13.24□□□□□ -0.29
DDR1-275ENST00000514434 TMEM145Q8NBT3 493 aa13.24□□□□□ -0.29
DDR1-275ENST00000514434 OR13H1Q8NG92 308 aa13.24□□□□□ -0.29
DDR1-275ENST00000514434 BAHD1Q8TBE0 780 aaPredicted RBP13.24□□□□□ -0.29
DDR1-275ENST00000514434 SAP25Q8TEE9 199 aa13.24□□□□□ -0.29
DDR1-275ENST00000514434 CASKIN2Q8WXE0 1202 aa13.24□□□□□ -0.29
DDR1-275ENST00000514434 ARHGEF26Q96DR7 871 aa13.24□□□□□ -0.29
DDR1-275ENST00000514434 IQCDQ96DY2 449 aa13.24□□□□□ -0.29
DDR1-275ENST00000514434 LRIG1Q96JA1 1093 aa13.24□□□□□ -0.29
DDR1-275ENST00000514434 SLC17A9Q9BYT1 436 aa13.24□□□□□ -0.29
DDR1-275ENST00000514434 SP110Q9HB58 689 aa13.24□□□□□ -0.29
DDR1-275ENST00000514434 DONSONQ9NYP3 566 aa13.24□□□□□ -0.29
DDR1-275ENST00000514434 CWC15Q9P013 229 aaKnown RBP13.24□□□□□ -0.29
DDR1-275ENST00000514434 LHX3Q9UBR4 397 aa13.24□□□□□ -0.29
DDR1-275ENST00000514434 ANAPC7Q9UJX3 599 aa13.24□□□□□ -0.29
DDR1-275ENST00000514434 MFHAS1Q9Y4C4 1052 aa13.24□□□□□ -0.29
DDR1-275ENST00000514434 USP24Q9UPU5 2620 aa13.23□□□□□ -0.29
DDR1-275ENST00000514434 EIF3CLB5ME19 914 aaKnown RBP13.23□□□□□ -0.29
DDR1-275ENST00000514434 H3BRJ5 948 aa13.23□□□□□ -0.29
DDR1-275ENST00000514434 RAD51BO15315 384 aa13.23□□□□□ -0.29
DDR1-275ENST00000514434 CBFA2T2O43439 604 aa13.23□□□□□ -0.29
DDR1-275ENST00000514434 TNFSF14O43557 240 aa13.23□□□□□ -0.29
DDR1-275ENST00000514434 PRAMEF11O60813 436 aa13.23□□□□□ -0.29
DDR1-275ENST00000514434 AMPD1P23109 780 aa13.23□□□□□ -0.29
DDR1-275ENST00000514434 PCK1P35558 622 aa13.23□□□□□ -0.29
DDR1-275ENST00000514434 GJC1P36383 396 aa13.23□□□□□ -0.29
DDR1-275ENST00000514434 EIF4A3P38919 411 aaKnown RBP13.23□□□□□ -0.29
DDR1-275ENST00000514434 OVGP1Q12889 678 aa13.23□□□□□ -0.29
DDR1-275ENST00000514434 PIGHQ14442 188 aaPredicted RBP13.23□□□□□ -0.29
DDR1-275ENST00000514434 ZNF542PQ5EBM4 170 aa13.23□□□□□ -0.29
DDR1-275ENST00000514434 TXNRD3NBQ6F5E7 133 aa13.23□□□□□ -0.29
DDR1-275ENST00000514434 KIAA1161Q6NSJ0 714 aa13.23□□□□□ -0.29
DDR1-275ENST00000514434 KDM7AQ6ZMT4 941 aa13.23□□□□□ -0.29
DDR1-275ENST00000514434 GCNT7Q6ZNI0 430 aa13.23□□□□□ -0.29
DDR1-275ENST00000514434 Q6ZSR6 202 aa13.23□□□□□ -0.29
DDR1-275ENST00000514434 PTAR1Q7Z6K3 402 aaPredicted RBP13.23□□□□□ -0.29
DDR1-275ENST00000514434 GLRX5Q86SX6 157 aa13.23□□□□□ -0.29
DDR1-275ENST00000514434 MARCH9Q86YJ5 346 aa13.23□□□□□ -0.29
DDR1-275ENST00000514434 TP53INP2Q8IXH6 220 aa13.23□□□□□ -0.29
DDR1-275ENST00000514434 PAF1Q8N7H5 531 aa13.23□□□□□ -0.29
DDR1-275ENST00000514434 ADAMTS14Q8WXS8 1223 aa13.23□□□□□ -0.29
DDR1-275ENST00000514434 VOPP1Q96AW1 172 aa13.23□□□□□ -0.29
DDR1-275ENST00000514434 EIF3CQ99613 913 aaKnown RBP13.23□□□□□ -0.29
DDR1-275ENST00000514434 OSBPL1AQ9BXW6 950 aa13.23□□□□□ -0.29
DDR1-275ENST00000514434 ERVMER34-1Q9H9K5 563 aa13.23□□□□□ -0.29
DDR1-275ENST00000514434 PDFQ9HBH1 243 aa13.23□□□□□ -0.29
DDR1-275ENST00000514434 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.23□□□□□ -0.29
DDR1-275ENST00000514434 TOR4AQ9NXH8 423 aa13.23□□□□□ -0.29
DDR1-275ENST00000514434 NEUROG3Q9Y4Z2 214 aa13.23□□□□□ -0.29
DDR1-275ENST00000514434 POM121BA6NF01 834 aa13.22□□□□□ -0.29
DDR1-275ENST00000514434 YKT6O15498 198 aa13.22□□□□□ -0.29
DDR1-275ENST00000514434 SPINT1O43278 529 aa13.22□□□□□ -0.29
DDR1-275ENST00000514434 TSPAN6O43657 245 aa13.22□□□□□ -0.29
DDR1-275ENST00000514434 AP1G1O43747 822 aa13.22□□□□□ -0.29
DDR1-275ENST00000514434 MMP20O60882 483 aa13.22□□□□□ -0.29
DDR1-275ENST00000514434 PALMO75781 387 aa13.22□□□□□ -0.29
DDR1-275ENST00000514434 CYP1A2P05177 515 aa13.22□□□□□ -0.29
DDR1-275ENST00000514434 RARAP10276 462 aa13.22□□□□□ -0.29
DDR1-275ENST00000514434 TIMP2P16035 220 aa13.22□□□□□ -0.29
DDR1-275ENST00000514434 XPAP23025 273 aaPredicted RBP13.22□□□□□ -0.29
DDR1-275ENST00000514434 ARL4AP40617 200 aa13.22□□□□□ -0.29
DDR1-275ENST00000514434 RXRGP48443 463 aa13.22□□□□□ -0.29
DDR1-275ENST00000514434 SEMG2Q02383 582 aa13.22□□□□□ -0.29
DDR1-275ENST00000514434 DNAJC3Q13217 504 aa13.22□□□□□ -0.29
DDR1-275ENST00000514434 DPYSQ14117 519 aa13.22□□□□□ -0.29
DDR1-275ENST00000514434 BOLA3Q53S33 107 aa13.22□□□□□ -0.29
DDR1-275ENST00000514434 SPECC1LQ69YQ0 1117 aa13.22□□□□□ -0.29
DDR1-275ENST00000514434 PSTKQ8IV42 348 aaKnown RBP13.22□□□□□ -0.29
DDR1-275ENST00000514434 ARHGAP12Q8IWW6 846 aa13.22□□□□□ -0.29
DDR1-275ENST00000514434 OXR1Q8N573 874 aa13.22□□□□□ -0.29
DDR1-275ENST00000514434 TSEN2Q8NCE0 465 aaKnown RBP13.22□□□□□ -0.29
DDR1-275ENST00000514434 RAB7BQ96AH8 199 aa13.22□□□□□ -0.29
DDR1-275ENST00000514434 CNDP2Q96KP4 475 aaKnown RBP13.22□□□□□ -0.29
DDR1-275ENST00000514434 WRAP53Q9BUR4 548 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms