RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 SCAMP5Q8TAC9 235 aa3.97□□□□□ -1.77
TOPBP1-208ENST00000511439 GLMPQ8WWB7 406 aa3.97□□□□□ -1.77
TOPBP1-208ENST00000511439 TBC1D20Q96BZ9 403 aa3.97□□□□□ -1.77
TOPBP1-208ENST00000511439 RITA1Q96K30 269 aa3.97□□□□□ -1.77
TOPBP1-208ENST00000511439 ISCA1Q9BUE6 129 aa3.97□□□□□ -1.77
TOPBP1-208ENST00000511439 DDX23Q9BUQ8 820 aaKnown RBP3.97□□□□□ -1.77
TOPBP1-208ENST00000511439 ABHD10Q9NUJ1 306 aa3.97□□□□□ -1.77
TOPBP1-208ENST00000511439 FBXO28Q9NVF7 368 aa3.97□□□□□ -1.77
TOPBP1-208ENST00000511439 NFU1Q9UMS0 254 aa3.97□□□□□ -1.77
TOPBP1-208ENST00000511439 DAPP1Q9UN19 280 aa3.97□□□□□ -1.77
TOPBP1-208ENST00000511439 PCDHB7Q9Y5E2 793 aa3.97□□□□□ -1.77
TOPBP1-208ENST00000511439 EP300Q09472 2414 aaPredicted RBP3.97□□□□□ -1.77
TOPBP1-208ENST00000511439 ANKRD17O75179 2603 aaKnown RBP3.97□□□□□ -1.77
TOPBP1-208ENST00000511439 PLXNB2O15031 1838 aa3.97□□□□□ -1.77
TOPBP1-208ENST00000511439 PHIPQ8WWQ0 1821 aa3.97□□□□□ -1.77
TOPBP1-208ENST00000511439 WDR87Q6ZQQ6 2873 aa3.96□□□□□ -1.77
TOPBP1-208ENST00000511439 TRIOO75962 3097 aa3.96□□□□□ -1.77
TOPBP1-208ENST00000511439 KIF28PB7ZC32 967 aa3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 TISP43B9A030 160 aa3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 GCATO75600 419 aa3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 CHRM5P08912 532 aaPredicted RBP3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 MAPK4P31152 587 aa3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 MMP13P45452 471 aa3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 CDK7P50613 346 aa3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 JAK3P52333 1124 aa3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 WDR5P61964 334 aaKnown RBP3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 LAMB3Q13751 1172 aa3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 KCNB1Q14721 858 aa3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 POSTNQ15063 836 aa3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 BTBD16Q32M84 506 aa3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 HSP90AB3PQ58FF7 597 aa3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 NFRKBQ6P4R8 1299 aa3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 TMEM65Q6PI78 240 aa3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 C16orf89Q6UX73 402 aa3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 LDHAL6AQ6ZMR3 332 aa3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 ZNF66Q6ZN08 573 aa3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 CCDC117Q8IWD4 279 aaPredicted RBP3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 GALNT15Q8N3T1 639 aa3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 MYRIPQ8NFW9 859 aa3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 NPIPB3Q92617 1050 aa3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 PABPC5Q96DU9 382 aaKnown RBP3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 CCDC17Q96LX7 622 aa3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 HS6ST2Q96MM7 605 aa3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 ZNF48Q96MX3 618 aaPredicted RBP3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 POLR3GLQ9BT43 218 aa3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 RNF26Q9BY78 433 aaPredicted RBP3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 VPS16Q9H269 839 aa3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 CDCP1Q9H5V8 836 aa3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 MLXIPQ9HAP2 919 aa3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 VPS4AQ9UN37 437 aa3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 CNTN6Q9UQ52 1028 aa3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 PCDHGB3Q9Y5G1 929 aa3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 HELZ2Q9BYK8 2649 aaKnown RBP3.96□□□□□ -1.78
TOPBP1-208ENST00000511439 DOCK3Q8IZD9 2030 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 SRRM3A6NNA2 597 aaPredicted RBP3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 EFCAB8A8MWE9 144 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 PRRT4C9JH25 899 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 M0QYT0 321 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 PPEF2O14830 753 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 NKX2-8O15522 239 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 PPP6R2O75170 966 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 LARGE1O95461 756 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 PDGFBP01127 241 aaPredicted RBP3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 DHRS4L1P0CG22 281 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 CYP2D6P10635 497 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 CYBAP13498 195 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 MYL6BP14649 208 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 CST5P28325 142 aaPredicted RBP3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 MPGP29372 298 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 THBS4P35443 961 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 SF3A3Q12874 501 aaKnown RBP eCLIP3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 GAB1Q13480 694 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 CBFBQ13951 182 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 ANGPT1Q15389 498 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 TMEM95Q3KNT9 176 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 TTC22Q5TAA0 569 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 VSTM1Q6UX27 236 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 RANBP10Q6VN20 620 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 RAB11FIP2Q7L804 512 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 DCLK2Q8N568 766 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 PNLDC1Q8NA58 520 aaKnown RBP3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 PNISRQ8TF01 805 aaKnown RBP3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 USP6NLQ92738 828 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 SECISBP2LQ93073 1101 aaKnown RBP3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 HMCESQ96FZ2 354 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 HIC2Q96JB3 615 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 FAR2Q96K12 515 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 TMEM79Q9BSE2 394 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 MECRQ9BV79 373 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 ELOVL1Q9BW60 279 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 ADGRE3Q9BY15 652 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 CCDC134Q9H6E4 229 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 TDRD3Q9H7E2 651 aaKnown RBP3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 TUBA8Q9NY65 449 aaPredicted RBP3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 LUZP4Q9P127 313 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 MORF4L1Q9UBU8 362 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 CTNNA3Q9UI47 895 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 C19orf53Q9UNZ5 99 aaPredicted RBP3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 GPR52Q9Y2T5 361 aa3.95□□□□□ -1.78
TOPBP1-208ENST00000511439 TEP1Q99973 2627 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms