RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 ELP1O95163 1332 aa7.21□□□□□ -1.26
USP53-206ENST00000510737 KIF16BQ96L93 1317 aa7.21□□□□□ -1.26
USP53-206ENST00000510737 SALL1Q9NSC2 1324 aa7.21□□□□□ -1.26
USP53-206ENST00000510737 CFAP47Q6ZTR5 3102 aa7.21□□□□□ -1.26
USP53-206ENST00000510737 DNAH14Q0VDD8 3507 aa7.2□□□□□ -1.26
USP53-206ENST00000510737 GPR75-ASB3A0A0A6YYF3 556 aa7.2□□□□□ -1.26
USP53-206ENST00000510737 GRM8O00222 908 aa7.2□□□□□ -1.26
USP53-206ENST00000510737 WNT1P04628 370 aa7.2□□□□□ -1.26
USP53-206ENST00000510737 ANXA2P07355 339 aaKnown RBP7.2□□□□□ -1.26
USP53-206ENST00000510737 IFIT1P09914 478 aaKnown RBP7.2□□□□□ -1.26
USP53-206ENST00000510737 STAT6P42226 847 aa7.2□□□□□ -1.26
USP53-206ENST00000510737 TMEM196Q5HYL7 178 aa7.2□□□□□ -1.26
USP53-206ENST00000510737 PIK3CD-AS1Q5SR53 167 aa7.2□□□□□ -1.26
USP53-206ENST00000510737 RNF44Q7L0R7 432 aa7.2□□□□□ -1.26
USP53-206ENST00000510737 UEVLDQ8IX04 471 aa7.2□□□□□ -1.26
USP53-206ENST00000510737 SDR16C5Q8N3Y7 309 aa7.2□□□□□ -1.26
USP53-206ENST00000510737 ATOH1Q92858 354 aaPredicted RBP7.2□□□□□ -1.26
USP53-206ENST00000510737 ZNF845Q96IR2 970 aaPredicted RBP7.2□□□□□ -1.26
USP53-206ENST00000510737 C12orf42Q96LP6 360 aa7.2□□□□□ -1.26
USP53-206ENST00000510737 AAMDCQ9H7C9 122 aa7.2□□□□□ -1.26
USP53-206ENST00000510737 NRBP1Q9UHY1 535 aa7.2□□□□□ -1.26
USP53-206ENST00000510737 ICKQ9UPZ9 632 aa7.2□□□□□ -1.26
USP53-206ENST00000510737 SPTLC2O15270 562 aa7.19□□□□□ -1.26
USP53-206ENST00000510737 MGEA5O60502 916 aa7.19□□□□□ -1.26
USP53-206ENST00000510737 ASGR1P07306 291 aa7.19□□□□□ -1.26
USP53-206ENST00000510737 CHRNB1P11230 501 aa7.19□□□□□ -1.26
USP53-206ENST00000510737 AGTR2P50052 363 aa7.19□□□□□ -1.26
USP53-206ENST00000510737 DMWDQ09019 674 aa7.19□□□□□ -1.26
USP53-206ENST00000510737 BFSP2Q13515 415 aa7.19□□□□□ -1.26
USP53-206ENST00000510737 SEMA5AQ13591 1074 aa7.19□□□□□ -1.26
USP53-206ENST00000510737 PUM3Q15397 648 aaKnown RBP7.19□□□□□ -1.26
USP53-206ENST00000510737 SRGAP1Q7Z6B7 1085 aa7.19□□□□□ -1.26
USP53-206ENST00000510737 NEK9Q8TD19 979 aa7.19□□□□□ -1.26
USP53-206ENST00000510737 GLT1D1Q96MS3 346 aa7.19□□□□□ -1.26
USP53-206ENST00000510737 HIPK3Q9H422 1215 aa7.19□□□□□ -1.26
USP53-206ENST00000510737 DNAJC18Q9H819 358 aa7.19□□□□□ -1.26
USP53-206ENST00000510737 HEYLQ9NQ87 328 aaPredicted RBP7.19□□□□□ -1.26
USP53-206ENST00000510737 MUTYHQ9UIF7 546 aa7.19□□□□□ -1.26
USP53-206ENST00000510737 HERC5Q9UII4 1024 aaKnown RBP7.19□□□□□ -1.26
USP53-206ENST00000510737 ANAPC4Q9UJX5 808 aa7.19□□□□□ -1.26
USP53-206ENST00000510737 PCDHGB6Q9Y5F9 930 aa7.19□□□□□ -1.26
USP53-206ENST00000510737 MROH7Q68CQ1 1323 aa7.19□□□□□ -1.26
USP53-206ENST00000510737 SYNRGQ9UMZ2 1314 aa7.19□□□□□ -1.26
USP53-206ENST00000510737 PLXNA3P51805 1871 aa7.19□□□□□ -1.26
USP53-206ENST00000510737 COL4A4P53420 1690 aaPredicted RBP7.19□□□□□ -1.26
USP53-206ENST00000510737 VPS13AQ96RL7 3174 aa7.18□□□□□ -1.26
USP53-206ENST00000510737 H3BQ06 376 aaPredicted RBP7.18□□□□□ -1.26
USP53-206ENST00000510737 M0QZQ0 153 aa7.18□□□□□ -1.26
USP53-206ENST00000510737 TNFRSF13BO14836 293 aaPredicted RBP7.18□□□□□ -1.26
USP53-206ENST00000510737 PRPF4O43172 522 aaKnown RBP eCLIP7.18□□□□□ -1.26
USP53-206ENST00000510737 ZC3H11AO75152 810 aaKnown RBP eCLIP7.18□□□□□ -1.26
USP53-206ENST00000510737 TBXAS1P24557 533 aaPredicted RBP7.18□□□□□ -1.26
USP53-206ENST00000510737 FAM193AP78312 1265 aa7.18□□□□□ -1.26
USP53-206ENST00000510737 HYAL1Q12794 435 aa7.18□□□□□ -1.26
USP53-206ENST00000510737 GPS1Q13098 491 aa7.18□□□□□ -1.26
USP53-206ENST00000510737 ELF2Q15723 593 aa7.18□□□□□ -1.26
USP53-206ENST00000510737 HERC4Q5GLZ8 1057 aaPredicted RBP7.18□□□□□ -1.26
USP53-206ENST00000510737 ZNF324BQ6AW86 544 aaPredicted RBP7.18□□□□□ -1.26
USP53-206ENST00000510737 CRTC1Q6UUV9 634 aa7.18□□□□□ -1.26
USP53-206ENST00000510737 OIT3Q8WWZ8 545 aa7.18□□□□□ -1.26
USP53-206ENST00000510737 STRBPQ96SI9 672 aaKnown RBP7.18□□□□□ -1.26
USP53-206ENST00000510737 SPATC1LQ9H0A9 340 aa7.18□□□□□ -1.26
USP53-206ENST00000510737 UTS2RQ9UKP6 389 aa7.18□□□□□ -1.26
USP53-206ENST00000510737 PCDHA7Q9UN72 937 aa7.18□□□□□ -1.26
USP53-206ENST00000510737 SMCHD1A6NHR9 2005 aa7.17□□□□□ -1.26
USP53-206ENST00000510737 COL4A6Q14031 1691 aa7.17□□□□□ -1.26
USP53-206ENST00000510737 A0A0U1RQG5 324 aaPredicted RBP7.17□□□□□ -1.26
USP53-206ENST00000510737 EME2A4GXA9 379 aaPredicted RBP7.17□□□□□ -1.26
USP53-206ENST00000510737 PGK2P07205 417 aa7.17□□□□□ -1.26
USP53-206ENST00000510737 NBPF7P0C2Y1 421 aaPredicted RBP7.17□□□□□ -1.26
USP53-206ENST00000510737 AKR1A1P14550 325 aa7.17□□□□□ -1.26
USP53-206ENST00000510737 MECOMQ03112 1051 aa7.17□□□□□ -1.26
USP53-206ENST00000510737 KCTD2Q14681 263 aa7.17□□□□□ -1.26
USP53-206ENST00000510737 PPP2R5AQ15172 486 aa7.17□□□□□ -1.26
USP53-206ENST00000510737 RABL6Q3YEC7 729 aaPredicted RBP7.17□□□□□ -1.26
USP53-206ENST00000510737 USP43Q70EL4 1123 aa7.17□□□□□ -1.26
USP53-206ENST00000510737 DZIP1Q86YF9 867 aaKnown RBP7.17□□□□□ -1.26
USP53-206ENST00000510737 FOXP4Q8IVH2 680 aaPredicted RBP7.17□□□□□ -1.26
USP53-206ENST00000510737 PHOSPHO2Q8TCD6 241 aa7.17□□□□□ -1.26
USP53-206ENST00000510737 ACER1Q8TDN7 264 aa7.17□□□□□ -1.26
USP53-206ENST00000510737 GDPD5Q8WTR4 605 aa7.17□□□□□ -1.26
USP53-206ENST00000510737 ASB12Q8WXK4 309 aa7.17□□□□□ -1.26
USP53-206ENST00000510737 TSR2Q969E8 191 aaKnown RBP7.17□□□□□ -1.26
USP53-206ENST00000510737 APOL5Q9BWW9 433 aa7.17□□□□□ -1.26
USP53-206ENST00000510737 UPF3BQ9BZI7 483 aaKnown RBP7.17□□□□□ -1.26
USP53-206ENST00000510737 TRPV6Q9H1D0 765 aa7.17□□□□□ -1.26
USP53-206ENST00000510737 FZD3Q9NPG1 666 aa7.17□□□□□ -1.26
USP53-206ENST00000510737 C9orf78Q9NZ63 289 aaPredicted RBP7.17□□□□□ -1.26
USP53-206ENST00000510737 MROH7-TTC4A0A0A0MT08 1334 aa7.17□□□□□ -1.26
USP53-206ENST00000510737 CLSPNQ9HAW4 1339 aa7.17□□□□□ -1.26
USP53-206ENST00000510737 KMT2EQ8IZD2 1858 aa7.17□□□□□ -1.26
USP53-206ENST00000510737 CHD8Q9HCK8 2581 aa7.16□□□□□ -1.26
USP53-206ENST00000510737 NCOR2Q9Y618 2525 aa7.16□□□□□ -1.26
USP53-206ENST00000510737 PRR23AA6NEV1 266 aa7.16□□□□□ -1.26
USP53-206ENST00000510737 TMEM221A6NGB7 291 aa7.16□□□□□ -1.26
USP53-206ENST00000510737 TTC34A8MYJ7 566 aa7.16□□□□□ -1.26
USP53-206ENST00000510737 M0R296 226 aa7.16□□□□□ -1.26
USP53-206ENST00000510737 CTAGE5O15320 804 aa7.16□□□□□ -1.26
USP53-206ENST00000510737 SNAI1O95863 264 aaPredicted RBP7.16□□□□□ -1.26
USP53-206ENST00000510737 TGFB3P10600 412 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms