RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 PYROXD2Q8N2H3 581 aa16.17■□□□□ 0.18
RAB40C-202ENST00000509637 CCDC185Q8N715 623 aa16.17■□□□□ 0.18
RAB40C-202ENST00000509637 MAPK15Q8TD08 544 aa16.17■□□□□ 0.18
RAB40C-202ENST00000509637 RXFP2Q8WXD0 754 aa16.17■□□□□ 0.18
RAB40C-202ENST00000509637 PCDHB18PQ96TA0 734 aa16.17■□□□□ 0.18
RAB40C-202ENST00000509637 TUBGCP2Q9BSJ2 902 aa16.17■□□□□ 0.18
RAB40C-202ENST00000509637 BOCQ9BWV1 1114 aa16.17■□□□□ 0.18
RAB40C-202ENST00000509637 RABGEF1Q9UJ41 708 aa16.17■□□□□ 0.18
RAB40C-202ENST00000509637 CSNK1G3Q9Y6M4 447 aa16.17■□□□□ 0.18
RAB40C-202ENST00000509637 FLNBO75369 2602 aaKnown RBP16.17■□□□□ 0.18
RAB40C-202ENST00000509637 INSIG1O15503 277 aa16.16■□□□□ 0.18
RAB40C-202ENST00000509637 KLK10O43240 276 aa16.16■□□□□ 0.18
RAB40C-202ENST00000509637 MMP20O60882 483 aa16.16■□□□□ 0.18
RAB40C-202ENST00000509637 LRIG2O94898 1065 aa16.16■□□□□ 0.18
RAB40C-202ENST00000509637 CYP1A1P04798 512 aaPredicted RBP16.16■□□□□ 0.18
RAB40C-202ENST00000509637 UGT2B4P06133 528 aa16.16■□□□□ 0.18
RAB40C-202ENST00000509637 UCHL3P15374 230 aa16.16■□□□□ 0.18
RAB40C-202ENST00000509637 TIMP2P16035 220 aa16.16■□□□□ 0.18
RAB40C-202ENST00000509637 RECQLP46063 649 aaPredicted RBP16.16■□□□□ 0.18
RAB40C-202ENST00000509637 PCBP4P57723 403 aaKnown RBP16.16■□□□□ 0.18
RAB40C-202ENST00000509637 ERVPABLB-1P60509 514 aa16.16■□□□□ 0.18
RAB40C-202ENST00000509637 FMO1Q01740 532 aa16.16■□□□□ 0.18
RAB40C-202ENST00000509637 LY6DQ14210 128 aa16.16■□□□□ 0.18
RAB40C-202ENST00000509637 MYLK3Q32MK0 819 aa16.16■□□□□ 0.18
RAB40C-202ENST00000509637 ZNF805Q5CZA5 627 aa16.16■□□□□ 0.18
RAB40C-202ENST00000509637 SMYD5Q6GMV2 418 aa16.16■□□□□ 0.18
RAB40C-202ENST00000509637 ZCCHC8Q6NZY4 707 aaKnown RBP16.16■□□□□ 0.18
RAB40C-202ENST00000509637 SLC30A5Q8TAD4 765 aa16.16■□□□□ 0.18
RAB40C-202ENST00000509637 ASB12Q8WXK4 309 aa16.16■□□□□ 0.18
RAB40C-202ENST00000509637 ISG20Q96AZ6 181 aaKnown RBP16.16■□□□□ 0.18
RAB40C-202ENST00000509637 KLHL32Q96NJ5 620 aa16.16■□□□□ 0.18
RAB40C-202ENST00000509637 SLC46A1Q96NT5 459 aa16.16■□□□□ 0.18
RAB40C-202ENST00000509637 LRRC61Q9BV99 259 aa16.16■□□□□ 0.18
RAB40C-202ENST00000509637 GANQ9H2C0 597 aa16.16■□□□□ 0.18
RAB40C-202ENST00000509637 OR12D3Q9UGF7 316 aa16.16■□□□□ 0.18
RAB40C-202ENST00000509637 SALL4Q9UJQ4 1053 aa16.16■□□□□ 0.18
RAB40C-202ENST00000509637 NEMP2A6NFY4 417 aa16.15■□□□□ 0.18
RAB40C-202ENST00000509637 C2CD4BA6NLJ0 364 aa16.15■□□□□ 0.18
RAB40C-202ENST00000509637 CDRT15L2A8MXV6 281 aa16.15■□□□□ 0.18
RAB40C-202ENST00000509637 MUSKO15146 869 aa16.15■□□□□ 0.18
RAB40C-202ENST00000509637 YY2O15391 372 aa16.15■□□□□ 0.18
RAB40C-202ENST00000509637 RABIFP47224 123 aa16.15■□□□□ 0.18
RAB40C-202ENST00000509637 ADKP55263 362 aaKnown RBP16.15■□□□□ 0.18
RAB40C-202ENST00000509637 HDAC4P56524 1084 aa16.15■□□□□ 0.18
RAB40C-202ENST00000509637 BPIFB4P59827 614 aa16.15■□□□□ 0.18
RAB40C-202ENST00000509637 NRG1Q02297 640 aaPredicted RBP16.15■□□□□ 0.18
RAB40C-202ENST00000509637 CCDC15Q0P6D6 951 aa16.15■□□□□ 0.18
RAB40C-202ENST00000509637 SRSF6Q13247 344 aaKnown RBP16.15■□□□□ 0.18
RAB40C-202ENST00000509637 CDO1Q16878 200 aa16.15■□□□□ 0.18
RAB40C-202ENST00000509637 ARCQ7LC44 396 aa16.15■□□□□ 0.18
RAB40C-202ENST00000509637 SFTPA2Q8IWL1 248 aa16.15■□□□□ 0.18
RAB40C-202ENST00000509637 MLKLQ8NB16 471 aa16.15■□□□□ 0.18
RAB40C-202ENST00000509637 TP53I13Q8NBR0 393 aaPredicted RBP16.15■□□□□ 0.18
RAB40C-202ENST00000509637 SNRNP27Q8WVK2 155 aaKnown RBP16.15■□□□□ 0.18
RAB40C-202ENST00000509637 CENPIQ92674 756 aaPredicted RBP16.15■□□□□ 0.18
RAB40C-202ENST00000509637 PPP1R16AQ96I34 528 aa16.15■□□□□ 0.18
RAB40C-202ENST00000509637 DUSP23Q9BVJ7 150 aa16.15■□□□□ 0.18
RAB40C-202ENST00000509637 TMEM248Q9NWD8 314 aa16.15■□□□□ 0.18
RAB40C-202ENST00000509637 F8VZ95 297 aa16.14■□□□□ 0.17
RAB40C-202ENST00000509637 KRIT1O00522 736 aa16.14■□□□□ 0.17
RAB40C-202ENST00000509637 FPGTO14772 594 aa16.14■□□□□ 0.17
RAB40C-202ENST00000509637 TPP1O14773 563 aa16.14■□□□□ 0.17
RAB40C-202ENST00000509637 TSPAN6O43657 245 aa16.14■□□□□ 0.17
RAB40C-202ENST00000509637 ALPPL2P10696 532 aa16.14■□□□□ 0.17
RAB40C-202ENST00000509637 PRKCSHP14314 528 aaPredicted RBP16.14■□□□□ 0.17
RAB40C-202ENST00000509637 TSHRP16473 764 aa16.14■□□□□ 0.17
RAB40C-202ENST00000509637 RHOQP17081 205 aa16.14■□□□□ 0.17
RAB40C-202ENST00000509637 MMP8P22894 467 aa16.14■□□□□ 0.17
RAB40C-202ENST00000509637 SNX16P57768 344 aa16.14■□□□□ 0.17
RAB40C-202ENST00000509637 TCEA2Q15560 299 aa16.14■□□□□ 0.17
RAB40C-202ENST00000509637 KIAA1614Q5VZ46 1190 aa16.14■□□□□ 0.17
RAB40C-202ENST00000509637 IGF2-ASQ6U949 168 aa16.14■□□□□ 0.17
RAB40C-202ENST00000509637 B3GNT8Q7Z7M8 397 aa16.14■□□□□ 0.17
RAB40C-202ENST00000509637 ZNF605Q86T29 641 aa16.14■□□□□ 0.17
RAB40C-202ENST00000509637 VPS36Q86VN1 386 aa16.14■□□□□ 0.17
RAB40C-202ENST00000509637 PHACTR4Q8IZ21 702 aa16.14■□□□□ 0.17
RAB40C-202ENST00000509637 RYBPQ8N488 228 aaPredicted RBP16.14■□□□□ 0.17
RAB40C-202ENST00000509637 OR2AP1Q8NGE2 309 aa16.14■□□□□ 0.17
RAB40C-202ENST00000509637 FAM174AQ8TBP5 190 aa16.14■□□□□ 0.17
RAB40C-202ENST00000509637 KCNE4Q8WWG9 221 aa16.14■□□□□ 0.17
RAB40C-202ENST00000509637 ABCG4Q9H172 646 aa16.14■□□□□ 0.17
RAB40C-202ENST00000509637 PDCL3Q9H2J4 239 aa16.14■□□□□ 0.17
RAB40C-202ENST00000509637 USP29Q9HBJ7 922 aa16.14■□□□□ 0.17
RAB40C-202ENST00000509637 COQ6Q9Y2Z9 468 aa16.14■□□□□ 0.17
RAB40C-202ENST00000509637 ERVH48-1M5A8F1 160 aa16.13■□□□□ 0.17
RAB40C-202ENST00000509637 KDELR3O43731 214 aa16.13■□□□□ 0.17
RAB40C-202ENST00000509637 GFPT2O94808 682 aa16.13■□□□□ 0.17
RAB40C-202ENST00000509637 GSRP00390 522 aa16.13■□□□□ 0.17
RAB40C-202ENST00000509637 DUSP3P51452 185 aaPredicted RBP16.13■□□□□ 0.17
RAB40C-202ENST00000509637 SGCGQ13326 291 aa16.13■□□□□ 0.17
RAB40C-202ENST00000509637 CYTH1Q15438 398 aa16.13■□□□□ 0.17
RAB40C-202ENST00000509637 HS1BP3Q53T59 392 aa16.13■□□□□ 0.17
RAB40C-202ENST00000509637 PRRT3Q5FWE3 981 aa16.13■□□□□ 0.17
RAB40C-202ENST00000509637 RWDD4Q6NW29 188 aaKnown RBP16.13■□□□□ 0.17
RAB40C-202ENST00000509637 ZSWIM9Q86XI8 627 aa16.13■□□□□ 0.17
RAB40C-202ENST00000509637 NSMCE3Q96MG7 304 aa16.13■□□□□ 0.17
RAB40C-202ENST00000509637 STK33Q9BYT3 514 aa16.13■□□□□ 0.17
RAB40C-202ENST00000509637 LHX3Q9UBR4 397 aa16.13■□□□□ 0.17
RAB40C-202ENST00000509637 IPO11Q9UI26 975 aaKnown RBP16.13■□□□□ 0.17
RAB40C-202ENST00000509637 LRP4O75096 1905 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms