RNA–Protein interactions for RNA: ENST00000506965.5

DDX41-206, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-206ENST00000506965 TP53I13Q8NBR0 393 aaPredicted RBP13.59□□□□□ -0.23
DDX41-206ENST00000506965 TMEM35BQ8NCS4 154 aa13.59□□□□□ -0.23
DDX41-206ENST00000506965 MAPK15Q8TD08 544 aa13.59□□□□□ -0.23
DDX41-206ENST00000506965 GPT2Q8TD30 523 aa13.59□□□□□ -0.23
DDX41-206ENST00000506965 LMX1AQ8TE12 382 aa13.59□□□□□ -0.23
DDX41-206ENST00000506965 FAM81BQ96LP2 452 aa13.59□□□□□ -0.23
DDX41-206ENST00000506965 CCDC114Q96M63 670 aa13.59□□□□□ -0.23
DDX41-206ENST00000506965 NDST4Q9H3R1 872 aa13.59□□□□□ -0.23
DDX41-206ENST00000506965 SYNCQ9H7C4 482 aa13.59□□□□□ -0.23
DDX41-206ENST00000506965 DYRK4Q9NR20 520 aa13.59□□□□□ -0.23
DDX41-206ENST00000506965 HECAQ9UBI9 543 aaPredicted RBP13.59□□□□□ -0.23
DDX41-206ENST00000506965 PPARGC1AQ9UBK2 798 aaKnown RBP13.59□□□□□ -0.23
DDX41-206ENST00000506965 DNAI1Q9UI46 699 aa13.59□□□□□ -0.23
DDX41-206ENST00000506965 FARP1Q9Y4F1 1045 aaPredicted RBP13.59□□□□□ -0.23
DDX41-206ENST00000506965 CSNK1G3Q9Y6M4 447 aa13.59□□□□□ -0.23
DDX41-206ENST00000506965 CPED1A4D0V7 1026 aa13.58□□□□□ -0.24
DDX41-206ENST00000506965 ERVH48-1M5A8F1 160 aa13.58□□□□□ -0.24
DDX41-206ENST00000506965 INSIG1O15503 277 aa13.58□□□□□ -0.24
DDX41-206ENST00000506965 KLK10O43240 276 aa13.58□□□□□ -0.24
DDX41-206ENST00000506965 UGT2B4P06133 528 aa13.58□□□□□ -0.24
DDX41-206ENST00000506965 RABIFP47224 123 aa13.58□□□□□ -0.24
DDX41-206ENST00000506965 HDAC4P56524 1084 aa13.58□□□□□ -0.24
DDX41-206ENST00000506965 ERVPABLB-1P60509 514 aa13.58□□□□□ -0.24
DDX41-206ENST00000506965 RAPGEF1Q13905 1077 aa13.58□□□□□ -0.24
DDX41-206ENST00000506965 TCEA2Q15560 299 aa13.58□□□□□ -0.24
DDX41-206ENST00000506965 CDO1Q16878 200 aa13.58□□□□□ -0.24
DDX41-206ENST00000506965 VWA3BQ502W6 1294 aa13.58□□□□□ -0.24
DDX41-206ENST00000506965 KIAA1614Q5VZ46 1190 aa13.58□□□□□ -0.24
DDX41-206ENST00000506965 B3GNT8Q7Z7M8 397 aa13.58□□□□□ -0.24
DDX41-206ENST00000506965 PYROXD2Q8N2H3 581 aa13.58□□□□□ -0.24
DDX41-206ENST00000506965 KCNE4Q8WWG9 221 aa13.58□□□□□ -0.24
DDX41-206ENST00000506965 FEM1CQ96JP0 617 aa13.58□□□□□ -0.24
DDX41-206ENST00000506965 KLHL32Q96NJ5 620 aa13.58□□□□□ -0.24
DDX41-206ENST00000506965 SLC46A1Q96NT5 459 aa13.58□□□□□ -0.24
DDX41-206ENST00000506965 GANQ9H2C0 597 aa13.58□□□□□ -0.24
DDX41-206ENST00000506965 SDK2Q58EX2 2172 aa13.57□□□□□ -0.24
DDX41-206ENST00000506965 F8VZ95 297 aa13.57□□□□□ -0.24
DDX41-206ENST00000506965 MUSKO15146 869 aa13.57□□□□□ -0.24
DDX41-206ENST00000506965 MMP20O60882 483 aa13.57□□□□□ -0.24
DDX41-206ENST00000506965 LRIG2O94898 1065 aa13.57□□□□□ -0.24
DDX41-206ENST00000506965 FGFR1OPO95684 399 aaKnown RBP13.57□□□□□ -0.24
DDX41-206ENST00000506965 F9P00740 461 aa13.57□□□□□ -0.24
DDX41-206ENST00000506965 UCHL3P15374 230 aa13.57□□□□□ -0.24
DDX41-206ENST00000506965 ADRA1BP35368 520 aa13.57□□□□□ -0.24
DDX41-206ENST00000506965 TMPRSS3P57727 454 aa13.57□□□□□ -0.24
DDX41-206ENST00000506965 FMO1Q01740 532 aa13.57□□□□□ -0.24
DDX41-206ENST00000506965 NRG1Q02297 640 aaPredicted RBP13.57□□□□□ -0.24
DDX41-206ENST00000506965 CLN3Q13286 438 aa13.57□□□□□ -0.24
DDX41-206ENST00000506965 ZNF805Q5CZA5 627 aa13.57□□□□□ -0.24
DDX41-206ENST00000506965 RETSATQ6NUM9 610 aa13.57□□□□□ -0.24
DDX41-206ENST00000506965 LRRC31Q6UY01 552 aa13.57□□□□□ -0.24
DDX41-206ENST00000506965 ZNF605Q86T29 641 aa13.57□□□□□ -0.24
DDX41-206ENST00000506965 VPS36Q86VN1 386 aa13.57□□□□□ -0.24
DDX41-206ENST00000506965 ZSWIM9Q86XI8 627 aa13.57□□□□□ -0.24
DDX41-206ENST00000506965 DCP2Q8IU60 420 aaKnown RBP13.57□□□□□ -0.24
DDX41-206ENST00000506965 PLPP6Q8IY26 295 aa13.57□□□□□ -0.24
DDX41-206ENST00000506965 PHACTR4Q8IZ21 702 aa13.57□□□□□ -0.24
DDX41-206ENST00000506965 SLC30A5Q8TAD4 765 aa13.57□□□□□ -0.24
DDX41-206ENST00000506965 RXFP2Q8WXD0 754 aa13.57□□□□□ -0.24
DDX41-206ENST00000506965 ASB12Q8WXK4 309 aa13.57□□□□□ -0.24
DDX41-206ENST00000506965 ISG20Q96AZ6 181 aaKnown RBP13.57□□□□□ -0.24
DDX41-206ENST00000506965 PPP1R16AQ96I34 528 aa13.57□□□□□ -0.24
DDX41-206ENST00000506965 NSMCE3Q96MG7 304 aa13.57□□□□□ -0.24
DDX41-206ENST00000506965 PCDHB18PQ96TA0 734 aa13.57□□□□□ -0.24
DDX41-206ENST00000506965 TUBGCP2Q9BSJ2 902 aa13.57□□□□□ -0.24
DDX41-206ENST00000506965 DUSP23Q9BVJ7 150 aa13.57□□□□□ -0.24
DDX41-206ENST00000506965 SAMSN1Q9NSI8 373 aaKnown RBP13.57□□□□□ -0.24
DDX41-206ENST00000506965 TMEM248Q9NWD8 314 aa13.57□□□□□ -0.24
DDX41-206ENST00000506965 OR12D3Q9UGF7 316 aa13.57□□□□□ -0.24
DDX41-206ENST00000506965 SALL4Q9UJQ4 1053 aa13.57□□□□□ -0.24
DDX41-206ENST00000506965 COQ6Q9Y2Z9 468 aa13.57□□□□□ -0.24
DDX41-206ENST00000506965 SPENQ96T58 3664 aaKnown RBP13.57□□□□□ -0.24
DDX41-206ENST00000506965 COL12A1Q99715 3063 aa13.57□□□□□ -0.24
DDX41-206ENST00000506965 MAST4O15021 2626 aa13.57□□□□□ -0.24
DDX41-206ENST00000506965 HECTD1Q9ULT8 2610 aa13.57□□□□□ -0.24
DDX41-206ENST00000506965 TLN1Q9Y490 2541 aaKnown RBP13.56□□□□□ -0.24
DDX41-206ENST00000506965 NEMP2A6NFY4 417 aa13.56□□□□□ -0.24
DDX41-206ENST00000506965 C2CD4BA6NLJ0 364 aa13.56□□□□□ -0.24
DDX41-206ENST00000506965 KRIT1O00522 736 aa13.56□□□□□ -0.24
DDX41-206ENST00000506965 NTN3O00634 580 aaPredicted RBP13.56□□□□□ -0.24
DDX41-206ENST00000506965 YY2O15391 372 aa13.56□□□□□ -0.24
DDX41-206ENST00000506965 TSPAN6O43657 245 aa13.56□□□□□ -0.24
DDX41-206ENST00000506965 CYP1A1P04798 512 aaPredicted RBP13.56□□□□□ -0.24
DDX41-206ENST00000506965 ALPPL2P10696 532 aa13.56□□□□□ -0.24
DDX41-206ENST00000506965 TIMP2P16035 220 aa13.56□□□□□ -0.24
DDX41-206ENST00000506965 TSHRP16473 764 aa13.56□□□□□ -0.24
DDX41-206ENST00000506965 RECQLP46063 649 aaPredicted RBP13.56□□□□□ -0.24
DDX41-206ENST00000506965 ADKP55263 362 aaKnown RBP13.56□□□□□ -0.24
DDX41-206ENST00000506965 SLC20A2Q08357 652 aa13.56□□□□□ -0.24
DDX41-206ENST00000506965 MYLK3Q32MK0 819 aa13.56□□□□□ -0.24
DDX41-206ENST00000506965 PRRT3Q5FWE3 981 aa13.56□□□□□ -0.24
DDX41-206ENST00000506965 SMYD5Q6GMV2 418 aa13.56□□□□□ -0.24
DDX41-206ENST00000506965 ARCQ7LC44 396 aa13.56□□□□□ -0.24
DDX41-206ENST00000506965 DENND6BQ8NEG7 585 aa13.56□□□□□ -0.24
DDX41-206ENST00000506965 OR2AP1Q8NGE2 309 aa13.56□□□□□ -0.24
DDX41-206ENST00000506965 CENPIQ92674 756 aaPredicted RBP13.56□□□□□ -0.24
DDX41-206ENST00000506965 USP29Q9HBJ7 922 aa13.56□□□□□ -0.24
DDX41-206ENST00000506965 LHX3Q9UBR4 397 aa13.56□□□□□ -0.24
DDX41-206ENST00000506965 APOBEC3BQ9UH17 382 aaKnown RBP13.56□□□□□ -0.24
DDX41-206ENST00000506965 ZFC3H1O60293 1989 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms