RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 STRADBQ9C0K7 418 aa21.36■■□□□ 1.01
SQSTM1-210ENST00000506042 SNX10Q9Y5X0 201 aa21.36■■□□□ 1.01
SQSTM1-210ENST00000506042 DOCK9Q9BZ29 2069 aa21.35■■□□□ 1.01
SQSTM1-210ENST00000506042 ZMPSTE24O75844 475 aa21.35■■□□□ 1.01
SQSTM1-210ENST00000506042 CTSEP14091 401 aa21.35■■□□□ 1.01
SQSTM1-210ENST00000506042 TFE3P19532 575 aaPredicted RBP21.35■■□□□ 1.01
SQSTM1-210ENST00000506042 ARF5P84085 180 aa21.35■■□□□ 1.01
SQSTM1-210ENST00000506042 EIF3IQ13347 325 aaKnown RBP21.35■■□□□ 1.01
SQSTM1-210ENST00000506042 DEFB133Q30KQ1 61 aa21.35■■□□□ 1.01
SQSTM1-210ENST00000506042 PRRT3Q5FWE3 981 aa21.35■■□□□ 1.01
SQSTM1-210ENST00000506042 ARHGAP40Q5TG30 622 aa21.35■■□□□ 1.01
SQSTM1-210ENST00000506042 GDPD4Q6W3E5 623 aa21.35■■□□□ 1.01
SQSTM1-210ENST00000506042 STRADAQ7RTN6 431 aa21.35■■□□□ 1.01
SQSTM1-210ENST00000506042 ARHGEF2Q92974 986 aaKnown RBP21.35■■□□□ 1.01
SQSTM1-210ENST00000506042 NCAPGQ9BPX3 1015 aa21.35■■□□□ 1.01
SQSTM1-210ENST00000506042 STK33Q9BYT3 514 aa21.35■■□□□ 1.01
SQSTM1-210ENST00000506042 SYNDIG1Q9H7V2 258 aa21.35■■□□□ 1.01
SQSTM1-210ENST00000506042 METTL5Q9NRN9 209 aaKnown RBP21.35■■□□□ 1.01
SQSTM1-210ENST00000506042 TMEM248Q9NWD8 314 aa21.35■■□□□ 1.01
SQSTM1-210ENST00000506042 SATB2Q9UPW6 733 aa21.35■■□□□ 1.01
SQSTM1-210ENST00000506042 LMO7DNF2Z398 122 aa21.34■■□□□ 1.01
SQSTM1-210ENST00000506042 GADD45BO75293 160 aaPredicted RBP21.34■■□□□ 1.01
SQSTM1-210ENST00000506042 UGT2B4P06133 528 aa21.34■■□□□ 1.01
SQSTM1-210ENST00000506042 GIMD1P0DJR0 217 aa21.34■■□□□ 1.01
SQSTM1-210ENST00000506042 UCHL3P15374 230 aa21.34■■□□□ 1.01
SQSTM1-210ENST00000506042 ADRA1BP35368 520 aa21.34■■□□□ 1.01
SQSTM1-210ENST00000506042 PFN3P60673 137 aa21.34■■□□□ 1.01
SQSTM1-210ENST00000506042 PPARDQ03181 441 aa21.34■■□□□ 1.01
SQSTM1-210ENST00000506042 CDO1Q16878 200 aa21.34■■□□□ 1.01
SQSTM1-210ENST00000506042 MYLK3Q32MK0 819 aa21.34■■□□□ 1.01
SQSTM1-210ENST00000506042 C6orf132Q5T0Z8 1188 aa21.34■■□□□ 1.01
SQSTM1-210ENST00000506042 KLHDC7AQ5VTJ3 777 aa21.34■■□□□ 1.01
SQSTM1-210ENST00000506042 NAA35Q5VZE5 725 aa21.34■■□□□ 1.01
SQSTM1-210ENST00000506042 MACC1Q6ZN28 852 aa21.34■■□□□ 1.01
SQSTM1-210ENST00000506042 PHACTR4Q8IZ21 702 aa21.34■■□□□ 1.01
SQSTM1-210ENST00000506042 ZNF843Q8N446 348 aa21.34■■□□□ 1.01
SQSTM1-210ENST00000506042 ANLNQ9NQW6 1124 aa21.34■■□□□ 1.01
SQSTM1-210ENST00000506042 TMEM59LQ9UK28 342 aa21.34■■□□□ 1.01
SQSTM1-210ENST00000506042 CCDC187A0A096LP49 1063 aa21.33■■□□□ 1.01
SQSTM1-210ENST00000506042 J3QKU1 62 aa21.33■■□□□ 1.01
SQSTM1-210ENST00000506042 MUSKO15146 869 aa21.33■■□□□ 1.01
SQSTM1-210ENST00000506042 BUB1O43683 1085 aa21.33■■□□□ 1.01
SQSTM1-210ENST00000506042 PNMA6AP0CW24 399 aaPredicted RBP21.33■■□□□ 1.01
SQSTM1-210ENST00000506042 PLA2G2AP14555 144 aa21.33■■□□□ 1.01
SQSTM1-210ENST00000506042 EEF1GP26641 437 aaKnown RBP21.33■■□□□ 1.01
SQSTM1-210ENST00000506042 PEX5P50542 639 aa21.33■■□□□ 1.01
SQSTM1-210ENST00000506042 CT47A1Q5JQC4 288 aaPredicted RBP21.33■■□□□ 1.01
SQSTM1-210ENST00000506042 GUSBP11Q6P575 273 aa21.33■■□□□ 1.01
SQSTM1-210ENST00000506042 LVRNQ6Q4G3 990 aa21.33■■□□□ 1.01
SQSTM1-210ENST00000506042 CPA5Q8WXQ8 436 aa21.33■■□□□ 1.01
SQSTM1-210ENST00000506042 KLHL32Q96NJ5 620 aa21.33■■□□□ 1.01
SQSTM1-210ENST00000506042 SLC46A1Q96NT5 459 aa21.33■■□□□ 1.01
SQSTM1-210ENST00000506042 DNAI1Q9UI46 699 aa21.33■■□□□ 1.01
SQSTM1-210ENST00000506042 FHOD1Q9Y613 1164 aa21.33■■□□□ 1.01
SQSTM1-210ENST00000506042 ZNF821O75541 412 aaPredicted RBP21.32■■□□□ 1
SQSTM1-210ENST00000506042 PTPN9P43378 593 aa21.32■■□□□ 1
SQSTM1-210ENST00000506042 ADKP55263 362 aaKnown RBP21.32■■□□□ 1
SQSTM1-210ENST00000506042 RHOAP61586 193 aa21.32■■□□□ 1
SQSTM1-210ENST00000506042 NOMO3P69849 1222 aa21.32■■□□□ 1
SQSTM1-210ENST00000506042 INO80DQ53TQ3 878 aaPredicted RBP21.32■■□□□ 1
SQSTM1-210ENST00000506042 EFHC2Q5JST6 749 aa21.32■■□□□ 1
SQSTM1-210ENST00000506042 FKBP15Q5T1M5 1219 aa21.32■■□□□ 1
SQSTM1-210ENST00000506042 ERAP2Q6P179 960 aa21.32■■□□□ 1
SQSTM1-210ENST00000506042 FOXR1Q6PIV2 292 aa21.32■■□□□ 1
SQSTM1-210ENST00000506042 CCDC81Q6ZN84 652 aa21.32■■□□□ 1
SQSTM1-210ENST00000506042 VPS36Q86VN1 386 aa21.32■■□□□ 1
SQSTM1-210ENST00000506042 GKN2Q86XP6 184 aa21.32■■□□□ 1
SQSTM1-210ENST00000506042 IRF2BP1Q8IU81 584 aa21.32■■□□□ 1
SQSTM1-210ENST00000506042 PAF1Q8N7H5 531 aa21.32■■□□□ 1
SQSTM1-210ENST00000506042 KLF6Q99612 283 aaPredicted RBP21.32■■□□□ 1
SQSTM1-210ENST00000506042 BOCQ9BWV1 1114 aa21.32■■□□□ 1
SQSTM1-210ENST00000506042 CATSPERBQ9H7T0 1116 aa21.32■■□□□ 1
SQSTM1-210ENST00000506042 ASCL3Q9NQ33 180 aa21.32■■□□□ 1
SQSTM1-210ENST00000506042 PADI4Q9UM07 663 aa21.32■■□□□ 1
SQSTM1-210ENST00000506042 F8VZ95 297 aa21.31■■□□□ 1
SQSTM1-210ENST00000506042 RAD51BO15315 384 aa21.31■■□□□ 1
SQSTM1-210ENST00000506042 KDELR3O43731 214 aa21.31■■□□□ 1
SQSTM1-210ENST00000506042 TGM2P21980 687 aa21.31■■□□□ 1
SQSTM1-210ENST00000506042 NSFP46459 744 aaKnown RBP21.31■■□□□ 1
SQSTM1-210ENST00000506042 YBEYP58557 167 aaPredicted RBP21.31■■□□□ 1
SQSTM1-210ENST00000506042 FGL2Q14314 439 aa21.31■■□□□ 1
SQSTM1-210ENST00000506042 BNIPLQ7Z465 357 aa21.31■■□□□ 1
SQSTM1-210ENST00000506042 ARL10Q8N8L6 244 aa21.31■■□□□ 1
SQSTM1-210ENST00000506042 ANKRD20A12PQ8NF67 263 aa21.31■■□□□ 1
SQSTM1-210ENST00000506042 OR6K2Q8NGY2 324 aa21.31■■□□□ 1
SQSTM1-210ENST00000506042 HCAR2Q8TDS4 363 aa21.31■■□□□ 1
SQSTM1-210ENST00000506042 EPS8L1Q8TE68 723 aa21.31■■□□□ 1
SQSTM1-210ENST00000506042 ATXN7L3BQ96GX2 97 aa21.31■■□□□ 1
SQSTM1-210ENST00000506042 EPAS1Q99814 870 aa21.31■■□□□ 1
SQSTM1-210ENST00000506042 SELENOOQ9BVL4 669 aa21.31■■□□□ 1
SQSTM1-210ENST00000506042 TTYH3Q9C0H2 523 aa21.31■■□□□ 1
SQSTM1-210ENST00000506042 CPNE5Q9HCH3 593 aa21.31■■□□□ 1
SQSTM1-210ENST00000506042 TMPRSS4Q9NRS4 437 aa21.31■■□□□ 1
SQSTM1-210ENST00000506042 DKK3Q9UBP4 350 aa21.31■■□□□ 1
SQSTM1-210ENST00000506042 ZNF212Q9UDV6 495 aa21.31■■□□□ 1
SQSTM1-210ENST00000506042 AJAP1Q9UKB5 411 aaPredicted RBP21.31■■□□□ 1
SQSTM1-210ENST00000506042 LAMA5O15230 3695 aa21.31■■□□□ 1
SQSTM1-210ENST00000506042 I6L893 689 aaPredicted RBP21.3■■□□□ 1
SQSTM1-210ENST00000506042 ZW10O43264 779 aa21.3■■□□□ 1
SQSTM1-210ENST00000506042 C1QL1O75973 258 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms