RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 POM121L1PQ3SYA9 428 aa6.13□□□□□ -1.43
GYPB-204ENST00000504951 ZCWPW2Q504Y3 356 aa6.13□□□□□ -1.43
GYPB-204ENST00000504951 CAPRIN2Q6IMN6 1127 aaKnown RBP6.13□□□□□ -1.43
GYPB-204ENST00000504951 CXorf57Q6NSI4 855 aaKnown RBP6.13□□□□□ -1.43
GYPB-204ENST00000504951 TCTN3Q6NUS6 607 aa6.13□□□□□ -1.43
GYPB-204ENST00000504951 FOXR1Q6PIV2 292 aa6.13□□□□□ -1.43
GYPB-204ENST00000504951 LCLAT1Q6UWP7 414 aa6.13□□□□□ -1.43
GYPB-204ENST00000504951 PTRH1Q86Y79 214 aaKnown RBP6.13□□□□□ -1.43
GYPB-204ENST00000504951 SLITRK4Q8IW52 837 aa6.13□□□□□ -1.43
GYPB-204ENST00000504951 CEP57L1Q8IYX8 460 aa6.13□□□□□ -1.43
GYPB-204ENST00000504951 SLC34A3Q8N130 599 aa6.13□□□□□ -1.43
GYPB-204ENST00000504951 SIX6OS1Q8N1H7 587 aa6.13□□□□□ -1.43
GYPB-204ENST00000504951 GPR156Q8NFN8 814 aa6.13□□□□□ -1.43
GYPB-204ENST00000504951 OR2A12Q8NGT7 310 aa6.13□□□□□ -1.43
GYPB-204ENST00000504951 C9orf43Q8TAL5 461 aaPredicted RBP6.13□□□□□ -1.43
GYPB-204ENST00000504951 LMX1AQ8TE12 382 aa6.13□□□□□ -1.43
GYPB-204ENST00000504951 EDEM1Q92611 657 aa6.13□□□□□ -1.43
GYPB-204ENST00000504951 USP7Q93009 1102 aa6.13□□□□□ -1.43
GYPB-204ENST00000504951 PPP1R16AQ96I34 528 aa6.13□□□□□ -1.43
GYPB-204ENST00000504951 SLC13A1Q9BZW2 595 aa6.13□□□□□ -1.43
GYPB-204ENST00000504951 SPRY4Q9C004 299 aa6.13□□□□□ -1.43
GYPB-204ENST00000504951 NUCKS1Q9H1E3 243 aaKnown RBP6.13□□□□□ -1.43
GYPB-204ENST00000504951 TMEM8AQ9HCN3 771 aa6.13□□□□□ -1.43
GYPB-204ENST00000504951 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.13□□□□□ -1.43
GYPB-204ENST00000504951 HESX1Q9UBX0 185 aa6.13□□□□□ -1.43
GYPB-204ENST00000504951 SLC25A13Q9UJS0 675 aa6.13□□□□□ -1.43
GYPB-204ENST00000504951 TSPAN16Q9UKR8 245 aa6.13□□□□□ -1.43
GYPB-204ENST00000504951 HPSEQ9Y251 543 aa6.13□□□□□ -1.43
GYPB-204ENST00000504951 PLAAQ9Y263 795 aa6.13□□□□□ -1.43
GYPB-204ENST00000504951 FRMD4BQ9Y2L6 1034 aa6.13□□□□□ -1.43
GYPB-204ENST00000504951 ZDHHC9Q9Y397 364 aa6.13□□□□□ -1.43
GYPB-204ENST00000504951 COQ4Q9Y3A0 265 aa6.13□□□□□ -1.43
GYPB-204ENST00000504951 LOXL2Q9Y4K0 774 aa6.13□□□□□ -1.43
GYPB-204ENST00000504951 FADS3Q9Y5Q0 445 aa6.13□□□□□ -1.43
GYPB-204ENST00000504951 DNMT3AQ9Y6K1 912 aaPredicted RBP6.13□□□□□ -1.43
GYPB-204ENST00000504951 UTP20O75691 2785 aaKnown RBP6.13□□□□□ -1.43
GYPB-204ENST00000504951 POLQO75417 2590 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 CENPEQ02224 2701 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 KCNU1A8MYU2 1149 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 O00370 1275 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 CALUO43852 315 aaPredicted RBP6.12□□□□□ -1.43
GYPB-204ENST00000504951 CLDN11O75508 207 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 RHOBTB3O94955 611 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 PCDH8O95206 1070 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 CENPBP07199 599 aaPredicted RBP6.12□□□□□ -1.43
GYPB-204ENST00000504951 PAEPP09466 180 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 SLC2A3P11169 496 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 SRCP12931 536 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 GLB1P16278 677 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 PRLRP16471 622 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 TSHRP16473 764 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 ZNF18P17022 549 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 TACR2P21452 398 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 CMA1P23946 247 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 L1CAMP32004 1257 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 NDUFA8P51970 172 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 ADKP55263 362 aaKnown RBP6.12□□□□□ -1.43
GYPB-204ENST00000504951 CYP4F2P78329 520 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 KRT83P78385 493 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 MC1RQ01726 317 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 DPYDQ12882 1025 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 PDE1CQ14123 709 aaPredicted RBP6.12□□□□□ -1.43
GYPB-204ENST00000504951 NR1D2Q14995 579 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 ELOCQ15369 112 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 MEA1Q16626 185 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 ZNF542PQ5EBM4 170 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 PRRT3Q5FWE3 981 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 ACBD5Q5T8D3 534 aaPredicted RBP6.12□□□□□ -1.43
GYPB-204ENST00000504951 SEL1L3Q68CR1 1132 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 KRT39Q6A163 491 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 MACC1Q6ZN28 852 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 PTAR1Q7Z6K3 402 aaPredicted RBP6.12□□□□□ -1.43
GYPB-204ENST00000504951 ZFAND4Q86XD8 727 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 JAMLQ86YT9 394 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 FAM186BQ8IYM0 893 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 SMYD4Q8IYR2 804 aaPredicted RBP6.12□□□□□ -1.43
GYPB-204ENST00000504951 CCAR2Q8N163 923 aaKnown RBP6.12□□□□□ -1.43
GYPB-204ENST00000504951 CFAP52Q8N1V2 620 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 DQX1Q8TE96 717 aaKnown RBP6.12□□□□□ -1.43
GYPB-204ENST00000504951 APOBEC4Q8WW27 367 aaKnown RBP6.12□□□□□ -1.43
GYPB-204ENST00000504951 RNF34Q969K3 372 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 SNX21Q969T3 373 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 TAAR9Q96RI9 348 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 HAPLN3Q96S86 360 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 LRRC61Q9BV99 259 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 DDA1Q9BW61 102 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 ASPSCR1Q9BZE9 553 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 CEP44Q9C0F1 390 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 CLPBQ9H078 707 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 GOLPH3LQ9H4A5 285 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 EPB41L5Q9HCM4 733 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 DYRK4Q9NR20 520 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 FOXJ2Q9P0K8 574 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 AKAP7Q9P0M2 348 aaPredicted RBP6.12□□□□□ -1.43
GYPB-204ENST00000504951 PISDQ9UG56 409 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 APOBEC3BQ9UH17 382 aaKnown RBP6.12□□□□□ -1.43
GYPB-204ENST00000504951 SLC12A6Q9UHW9 1150 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 IPO11Q9UI26 975 aaKnown RBP6.12□□□□□ -1.43
GYPB-204ENST00000504951 CEP83Q9Y592 693 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 CELSR2Q9HCU4 2923 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms