RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 FAM174AQ8TBP5 190 aa22.37■■□□□ 1.17
LSM6-203ENST00000503982 CASKIN2Q8WXE0 1202 aa22.37■■□□□ 1.17
LSM6-203ENST00000503982 ARHGEF26Q96DR7 871 aa22.37■■□□□ 1.17
LSM6-203ENST00000503982 DHX35Q9H5Z1 703 aaKnown RBP22.37■■□□□ 1.17
LSM6-203ENST00000503982 HAUS4Q9H6D7 363 aa22.37■■□□□ 1.17
LSM6-203ENST00000503982 PCSK1NQ9UHG2 260 aa22.37■■□□□ 1.17
LSM6-203ENST00000503982 AP4E1Q9UPM8 1137 aa22.37■■□□□ 1.17
LSM6-203ENST00000503982 HS3ST3A1Q9Y663 406 aa22.37■■□□□ 1.17
LSM6-203ENST00000503982 A0A1W2PQC6 194 aa22.36■■□□□ 1.17
LSM6-203ENST00000503982 TAF4O00268 1085 aa22.36■■□□□ 1.17
LSM6-203ENST00000503982 EEF2KO00418 725 aaKnown RBP22.36■■□□□ 1.17
LSM6-203ENST00000503982 OGDHQ02218 1023 aa22.36■■□□□ 1.17
LSM6-203ENST00000503982 PARP15Q460N3 678 aa22.36■■□□□ 1.17
LSM6-203ENST00000503982 ZSCAN30Q86W11 494 aa22.36■■□□□ 1.17
LSM6-203ENST00000503982 DCP2Q8IU60 420 aaKnown RBP22.36■■□□□ 1.17
LSM6-203ENST00000503982 PAF1Q8N7H5 531 aa22.36■■□□□ 1.17
LSM6-203ENST00000503982 PDCD7Q8N8D1 485 aaKnown RBP22.36■■□□□ 1.17
LSM6-203ENST00000503982 CXorf40AQ8TE69 158 aa22.36■■□□□ 1.17
LSM6-203ENST00000503982 VCPIP1Q96JH7 1222 aa22.36■■□□□ 1.17
LSM6-203ENST00000503982 EXOC2Q96KP1 924 aa22.36■■□□□ 1.17
LSM6-203ENST00000503982 ANP32EQ9BTT0 268 aa22.36■■□□□ 1.17
LSM6-203ENST00000503982 TTYH3Q9C0H2 523 aa22.36■■□□□ 1.17
LSM6-203ENST00000503982 KLC2Q9H0B6 622 aa22.36■■□□□ 1.17
LSM6-203ENST00000503982 DONSONQ9NYP3 566 aa22.36■■□□□ 1.17
LSM6-203ENST00000503982 MYO1AQ9UBC5 1043 aa22.36■■□□□ 1.17
LSM6-203ENST00000503982 UBA2Q9UBT2 640 aaPredicted RBP22.36■■□□□ 1.17
LSM6-203ENST00000503982 GGT7Q9UJ14 662 aa22.36■■□□□ 1.17
LSM6-203ENST00000503982 ARID1BQ8NFD5 2236 aaPredicted RBP22.35■■□□□ 1.17
LSM6-203ENST00000503982 POM121BA6NF01 834 aa22.35■■□□□ 1.17
LSM6-203ENST00000503982 SIGLEC6O43699 453 aa22.35■■□□□ 1.17
LSM6-203ENST00000503982 MAMLD1Q13495 774 aa22.35■■□□□ 1.17
LSM6-203ENST00000503982 SERINC3Q13530 473 aa22.35■■□□□ 1.17
LSM6-203ENST00000503982 FGL2Q14314 439 aa22.35■■□□□ 1.17
LSM6-203ENST00000503982 CFAP58Q5T655 872 aa22.35■■□□□ 1.17
LSM6-203ENST00000503982 HES3Q5TGS1 186 aa22.35■■□□□ 1.17
LSM6-203ENST00000503982 KYAT3Q6YP21 454 aaKnown RBP22.35■■□□□ 1.17
LSM6-203ENST00000503982 KANSL1Q7Z3B3 1105 aa22.35■■□□□ 1.17
LSM6-203ENST00000503982 ABI3BPQ7Z7G0 1075 aa22.35■■□□□ 1.17
LSM6-203ENST00000503982 ZNF653Q96CK0 615 aa22.35■■□□□ 1.17
LSM6-203ENST00000503982 CELF6Q96J87 481 aaKnown RBP22.35■■□□□ 1.17
LSM6-203ENST00000503982 NOL6Q9H6R4 1146 aaKnown RBP22.35■■□□□ 1.17
LSM6-203ENST00000503982 UCKL1Q9NWZ5 548 aa22.35■■□□□ 1.17
LSM6-203ENST00000503982 CNOT8Q9UFF9 292 aaKnown RBP22.35■■□□□ 1.17
LSM6-203ENST00000503982 LHX6Q9UPM6 363 aa22.35■■□□□ 1.17
LSM6-203ENST00000503982 ANKRD36A6QL64 1941 aa22.35■■□□□ 1.17
LSM6-203ENST00000503982 WDFY3Q8IZQ1 3526 aa22.35■■□□□ 1.17
LSM6-203ENST00000503982 WASH4PA8MWX3 477 aa22.34■■□□□ 1.17
LSM6-203ENST00000503982 H3BM21 787 aa22.34■■□□□ 1.17
LSM6-203ENST00000503982 RAD51BO15315 384 aa22.34■■□□□ 1.17
LSM6-203ENST00000503982 PIAS2O75928 621 aa22.34■■□□□ 1.17
LSM6-203ENST00000503982 FTLP02792 175 aaPredicted RBP22.34■■□□□ 1.17
LSM6-203ENST00000503982 RABIFP47224 123 aa22.34■■□□□ 1.17
LSM6-203ENST00000503982 PDE1CQ14123 709 aaPredicted RBP22.34■■□□□ 1.17
LSM6-203ENST00000503982 NR1I3Q14994 352 aa22.34■■□□□ 1.17
LSM6-203ENST00000503982 INO80DQ53TQ3 878 aaPredicted RBP22.34■■□□□ 1.17
LSM6-203ENST00000503982 C19orf48Q6RUI8 117 aa22.34■■□□□ 1.17
LSM6-203ENST00000503982 ZNF571Q7Z3V5 609 aaPredicted RBP22.34■■□□□ 1.17
LSM6-203ENST00000503982 SLC22A18ASQ8N1D0 253 aa22.34■■□□□ 1.17
LSM6-203ENST00000503982 BMFQ96LC9 184 aa22.34■■□□□ 1.17
LSM6-203ENST00000503982 NEMP2A6NFY4 417 aa22.33■■□□□ 1.17
LSM6-203ENST00000503982 ARHGAP42A6NI28 874 aa22.33■■□□□ 1.17
LSM6-203ENST00000503982 TRIM38O00635 465 aa22.33■■□□□ 1.17
LSM6-203ENST00000503982 PRPSAP2O60256 369 aa22.33■■□□□ 1.17
LSM6-203ENST00000503982 SKILP12757 684 aa22.33■■□□□ 1.17
LSM6-203ENST00000503982 HTR7P34969 479 aa22.33■■□□□ 1.17
LSM6-203ENST00000503982 HNRNPKP61978 463 aaKnown RBP eCLIP22.33■■□□□ 1.17
LSM6-203ENST00000503982 FANCCQ00597 558 aa22.33■■□□□ 1.17
LSM6-203ENST00000503982 ZNF211Q13398 564 aaPredicted RBP22.33■■□□□ 1.17
LSM6-203ENST00000503982 TDRD12Q587J7 1177 aaKnown RBP22.33■■□□□ 1.17
LSM6-203ENST00000503982 PPP6R3Q5H9R7 873 aaPredicted RBP22.33■■□□□ 1.17
LSM6-203ENST00000503982 ERMARDQ5T6L9 678 aa22.33■■□□□ 1.17
LSM6-203ENST00000503982 PLEKHA7Q6IQ23 1121 aa22.33■■□□□ 1.17
LSM6-203ENST00000503982 VPS36Q86VN1 386 aa22.33■■□□□ 1.17
LSM6-203ENST00000503982 UMODL1-AS1Q8N2C9 162 aa22.33■■□□□ 1.17
LSM6-203ENST00000503982 SLC25A45Q8N413 288 aa22.33■■□□□ 1.17
LSM6-203ENST00000503982 OR4C6Q8NH72 309 aa22.33■■□□□ 1.17
LSM6-203ENST00000503982 TSC1Q92574 1164 aa22.33■■□□□ 1.17
LSM6-203ENST00000503982 C1QTNF7Q9BXJ2 289 aa22.33■■□□□ 1.17
LSM6-203ENST00000503982 RAXQ9Y2V3 346 aa22.33■■□□□ 1.17
LSM6-203ENST00000503982 AK5Q9Y6K8 562 aa22.33■■□□□ 1.17
LSM6-203ENST00000503982 SCINQ9Y6U3 715 aa22.33■■□□□ 1.17
LSM6-203ENST00000503982 CFAP47Q6ZTR5 3102 aa22.33■■□□□ 1.16
LSM6-203ENST00000503982 MMP20O60882 483 aa22.32■■□□□ 1.16
LSM6-203ENST00000503982 PIGNO95427 931 aa22.32■■□□□ 1.16
LSM6-203ENST00000503982 THOP1P52888 689 aa22.32■■□□□ 1.16
LSM6-203ENST00000503982 TARDBPQ13148 414 aaKnown RBP eCLIP22.32■■□□□ 1.16
LSM6-203ENST00000503982 ILKQ13418 452 aa22.32■■□□□ 1.16
LSM6-203ENST00000503982 PROX2Q3B8N5 592 aa22.32■■□□□ 1.16
LSM6-203ENST00000503982 PARGQ86W56 976 aa22.32■■□□□ 1.16
LSM6-203ENST00000503982 TRIM11Q96F44 468 aa22.32■■□□□ 1.16
LSM6-203ENST00000503982 NAP1L5Q96NT1 182 aaPredicted RBP22.32■■□□□ 1.16
LSM6-203ENST00000503982 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.32■■□□□ 1.16
LSM6-203ENST00000503982 WRAP53Q9BUR4 548 aaKnown RBP22.32■■□□□ 1.16
LSM6-203ENST00000503982 SNRNP25Q9BV90 132 aaKnown RBP22.32■■□□□ 1.16
LSM6-203ENST00000503982 C1QTNF2Q9BXJ5 285 aa22.32■■□□□ 1.16
LSM6-203ENST00000503982 CAAP1Q9H8G2 361 aa22.32■■□□□ 1.16
LSM6-203ENST00000503982 EVA1BQ9NVM1 165 aa22.32■■□□□ 1.16
LSM6-203ENST00000503982 AIPL1Q9NZN9 384 aa22.32■■□□□ 1.16
LSM6-203ENST00000503982 CHD6Q8TD26 2715 aa22.32■■□□□ 1.16
LSM6-203ENST00000503982 ADAMTS20P59510 1910 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms