RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 CEP57Q86XR8 500 aa6.26□□□□□ -1.41
BRCA1-224ENST00000497488 RNF168Q8IYW5 571 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-224ENST00000497488 SFRP1Q8N474 314 aa6.26□□□□□ -1.41
BRCA1-224ENST00000497488 SIRT6Q8N6T7 355 aa6.26□□□□□ -1.41
BRCA1-224ENST00000497488 RNF169Q8NCN4 708 aa6.26□□□□□ -1.41
BRCA1-224ENST00000497488 SUPT20HQ8NEM7 779 aa6.26□□□□□ -1.41
BRCA1-224ENST00000497488 PTPMT1Q8WUK0 201 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-224ENST00000497488 ST8SIA2Q92186 375 aa6.26□□□□□ -1.41
BRCA1-224ENST00000497488 TP53INP1Q96A56 240 aa6.26□□□□□ -1.41
BRCA1-224ENST00000497488 UROC1Q96N76 676 aa6.26□□□□□ -1.41
BRCA1-224ENST00000497488 NEK1Q96PY6 1258 aa6.26□□□□□ -1.41
BRCA1-224ENST00000497488 INTS14Q96SY0 518 aa6.26□□□□□ -1.41
BRCA1-224ENST00000497488 C11orf84Q9BUA3 381 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-224ENST00000497488 TRIM31Q9BZY9 425 aa6.26□□□□□ -1.41
BRCA1-224ENST00000497488 IL23AQ9NPF7 189 aa6.26□□□□□ -1.41
BRCA1-224ENST00000497488 TRIM36Q9NQ86 728 aa6.26□□□□□ -1.41
BRCA1-224ENST00000497488 SETD4Q9NVD3 440 aa6.26□□□□□ -1.41
BRCA1-224ENST00000497488 CRNNQ9UBG3 495 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-224ENST00000497488 NKX1-2Q9UD57 310 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-224ENST00000497488 A4GNTQ9UNA3 340 aa6.26□□□□□ -1.41
BRCA1-224ENST00000497488 EXOC7Q9UPT5 735 aa6.26□□□□□ -1.41
BRCA1-224ENST00000497488 AURKCQ9UQB9 309 aa6.26□□□□□ -1.41
BRCA1-224ENST00000497488 KIF3AQ9Y496 699 aa6.26□□□□□ -1.41
BRCA1-224ENST00000497488 ANGPTL3Q9Y5C1 460 aa6.26□□□□□ -1.41
BRCA1-224ENST00000497488 CLDN16Q9Y5I7 305 aa6.26□□□□□ -1.41
BRCA1-224ENST00000497488 CFAP43Q8NDM7 1665 aa6.26□□□□□ -1.41
BRCA1-224ENST00000497488 ZNF644Q9H582 1327 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-224ENST00000497488 MAGI3Q5TCQ9 1506 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 ABCA9Q8IUA7 1624 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 HTR3EA5X5Y0 456 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 TMEM110-MUSTN1A8MSY1 372 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 IFNL4K9M1U5 179 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 NDUFS3O75489 264 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 PALMO75781 387 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 STC2O76061 302 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 DDHD2O94830 711 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 TRIM16O95361 564 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 ALDOAP04075 364 aaKnown RBP6.25□□□□□ -1.41
BRCA1-224ENST00000497488 ITGB5P18084 799 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 TCEA1P23193 301 aaKnown RBP6.25□□□□□ -1.41
BRCA1-224ENST00000497488 GJC1P36383 396 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 ACAA2P42765 397 aaKnown RBP6.25□□□□□ -1.41
BRCA1-224ENST00000497488 RRADP55042 308 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 CASP9P55211 416 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 ASIC1P78348 528 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 PPATQ06203 517 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 TEFQ10587 303 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 MRPL28Q13084 256 aaKnown RBP6.25□□□□□ -1.41
BRCA1-224ENST00000497488 MTA1Q13330 715 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 IL13RA2Q14627 380 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 CSRP2Q16527 193 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 ST3GAL2Q16842 350 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 DAB2IPQ5VWQ8 1189 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 SFRP4Q6FHJ7 346 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-224ENST00000497488 ACSM6Q6P461 480 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 DRICH1Q6PGQ1 229 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-224ENST00000497488 MEX3BQ6ZN04 569 aaKnown RBP6.25□□□□□ -1.41
BRCA1-224ENST00000497488 GSTA5Q7RTV2 222 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 CPXM2Q8N436 756 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 TTLL6Q8N841 843 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.25□□□□□ -1.41
BRCA1-224ENST00000497488 KYQ8NBH2 561 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 MCUQ8NE86 351 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 NUDT10Q8NFP7 164 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 OR14K1Q8NGZ2 314 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 OSCP1Q8WVF1 389 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 LRRC59Q96AG4 307 aaKnown RBP6.25□□□□□ -1.41
BRCA1-224ENST00000497488 NUDT11Q96G61 164 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 BORCS6Q96GS4 357 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 MARS2Q96GW9 593 aaKnown RBP6.25□□□□□ -1.41
BRCA1-224ENST00000497488 UTP14AQ9BVJ6 771 aaKnown RBP6.25□□□□□ -1.41
BRCA1-224ENST00000497488 GPR88Q9GZN0 384 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 RNF32Q9H0A6 362 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 EPC1Q9H2F5 836 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 PDZD7Q9H5P4 517 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 DENND2DQ9H6A0 471 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-224ENST00000497488 CYP39A1Q9NYL5 469 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 CWC15Q9P013 229 aaKnown RBP6.25□□□□□ -1.41
BRCA1-224ENST00000497488 KIAA1456Q9P272 454 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 CTTNBP2NLQ9P2B4 639 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 HPCAL4Q9UM19 191 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 CHKBQ9Y259 395 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 FER1L4A9Z1Z3 1794 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 ATP8B3O60423 1300 aa6.25□□□□□ -1.41
BRCA1-224ENST00000497488 TTC37Q6PGP7 1564 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 TEX14Q8IWB6 1497 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 GPR75-ASB3A0A0A6YYF3 556 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 ANXA2P2A6NMY6 339 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 ZAR1LA6NP61 321 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 C17orf100A8MU93 164 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 ABLIM1O14639 778 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 GSC2O15499 205 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 HCRTR2O43614 444 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 IFNB1P01574 187 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 PDHA1P08559 390 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 TMEM11P17152 192 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 GCSHP23434 173 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 PBLDP30039 288 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-224ENST00000497488 HSPA4P34932 840 aa6.24□□□□□ -1.41
BRCA1-224ENST00000497488 ADRA1BP35368 520 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms