RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 MSH4O15457 936 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 CST8O60676 142 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 CDH1P12830 882 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 POLR2CP19387 275 aaPredicted RBP9.16□□□□□ -0.94
HPS4-217ENST00000496385 IMPDH1P20839 514 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 IL12AP29459 219 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 DSG3P32926 999 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 GRM5P41594 1212 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 QARSP47897 775 aaKnown RBP9.16□□□□□ -0.94
HPS4-217ENST00000496385 CLK3P49761 638 aaKnown RBP9.16□□□□□ -0.94
HPS4-217ENST00000496385 SLC26A2P50443 739 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 PPP5CP53041 499 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 SLC10A2Q12908 348 aaPredicted RBP9.16□□□□□ -0.94
HPS4-217ENST00000496385 BFSP2Q13515 415 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 NEDD8Q15843 81 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 ATP6AP1Q15904 470 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 DGUOKQ16854 277 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 RBM48Q5RL73 367 aaKnown RBP9.16□□□□□ -0.94
HPS4-217ENST00000496385 ERAP2Q6P179 960 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 CYP4V2Q6ZWL3 525 aaPredicted RBP9.16□□□□□ -0.94
HPS4-217ENST00000496385 MFSD4AQ8N468 514 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 SLC4A11Q8NBS3 891 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 TOR1AIP2Q8NFQ8 470 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 ZNF296Q8WUU4 475 aaPredicted RBP9.16□□□□□ -0.94
HPS4-217ENST00000496385 OSCP1Q8WVF1 389 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 LPGAT1Q92604 370 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 AIFM2Q9BRQ8 373 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 TRIM15Q9C019 465 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 ILKAPQ9H0C8 392 aaPredicted RBP9.16□□□□□ -0.94
HPS4-217ENST00000496385 PCIF1Q9H4Z3 704 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 RAVER2Q9HCJ3 691 aaKnown RBP9.16□□□□□ -0.94
HPS4-217ENST00000496385 CYP26B1Q9NR63 512 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 SMYD2Q9NRG4 433 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 C1orf112Q9NSG2 853 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 C20orf96Q9NUD7 363 aaPredicted RBP9.16□□□□□ -0.94
HPS4-217ENST00000496385 CCM2LQ9NUG4 571 aaPredicted RBP9.16□□□□□ -0.94
HPS4-217ENST00000496385 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.16□□□□□ -0.94
HPS4-217ENST00000496385 KLHL11Q9NVR0 708 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 GMIPQ9P107 970 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 KLQ9UEF7 1012 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 ZNF229Q9UJW7 825 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 SMCHD1A6NHR9 2005 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 AQP12BA6NM10 295 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 FAM25AB3EWG3 89 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 FAM25CB3EWG5 89 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 FAM25GB3EWG6 89 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 K7ENM7 598 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 TAF4O00268 1085 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 RASAL1O95294 804 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 GNAO1P09471 354 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 FCGR1AP12314 374 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 CKMT2P17540 419 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 GARTP22102 1010 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 CTGFP29279 349 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 RRM2P31350 389 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 TUFMP49411 452 aaKnown RBP9.16□□□□□ -0.94
HPS4-217ENST00000496385 MMRN1Q13201 1228 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 DUSP7Q16829 419 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 HADHQ16836 314 aaKnown RBP9.16□□□□□ -0.94
HPS4-217ENST00000496385 ZNF181Q2M3W8 571 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 RNF19BQ6ZMZ0 732 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 ADAMTSL2Q86TH1 951 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 AQP12AQ8IXF9 295 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 PIAS4Q8N2W9 510 aaPredicted RBP9.16□□□□□ -0.94
HPS4-217ENST00000496385 TDRD5Q8NAT2 981 aaKnown RBP9.16□□□□□ -0.94
HPS4-217ENST00000496385 CMASQ8NFW8 434 aaPredicted RBP9.16□□□□□ -0.94
HPS4-217ENST00000496385 CD99L2Q8TCZ2 262 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 FKBP10Q96AY3 582 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 FAF2Q96CS3 445 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 HDAC11Q96DB2 347 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 GMCL1Q96IK5 515 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 CBWD1Q9BRT8 395 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 EMILIN2Q9BXX0 1053 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 PORCNQ9H237 461 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 FANCEQ9HB96 536 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 ADA2Q9NZK5 511 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 IFT80Q9P2H3 777 aaPredicted RBP9.16□□□□□ -0.94
HPS4-217ENST00000496385 PRR12Q9ULL5 1215 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 SLC27A5Q9Y2P5 690 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 WBP11Q9Y2W2 641 aaKnown RBP9.16□□□□□ -0.94
HPS4-217ENST00000496385 RAP2CQ9Y3L5 183 aa9.16□□□□□ -0.94
HPS4-217ENST00000496385 COL11A1P12107 1806 aaPredicted RBP9.15□□□□□ -0.94
HPS4-217ENST00000496385 RLFQ13129 1914 aa9.15□□□□□ -0.94
HPS4-217ENST00000496385 SLC15A5A6NIM6 579 aa9.15□□□□□ -0.94
HPS4-217ENST00000496385 ZSCAN5BA6NJL1 495 aa9.15□□□□□ -0.94
HPS4-217ENST00000496385 HAT1O14929 419 aa9.15□□□□□ -0.94
HPS4-217ENST00000496385 MTSS1O43312 755 aa9.15□□□□□ -0.94
HPS4-217ENST00000496385 BCAS1O75363 584 aaPredicted RBP9.15□□□□□ -0.94
HPS4-217ENST00000496385 IL18RAPO95256 599 aa9.15□□□□□ -0.94
HPS4-217ENST00000496385 PTTG1O95997 202 aa9.15□□□□□ -0.94
HPS4-217ENST00000496385 ALDH1A1P00352 501 aa9.15□□□□□ -0.94
HPS4-217ENST00000496385 MYCP01106 439 aaPredicted RBP9.15□□□□□ -0.94
HPS4-217ENST00000496385 CTRB1P17538 263 aa9.15□□□□□ -0.94
HPS4-217ENST00000496385 MSX2P35548 267 aaPredicted RBP9.15□□□□□ -0.94
HPS4-217ENST00000496385 CASP3P42574 277 aa9.15□□□□□ -0.94
HPS4-217ENST00000496385 NR4A2P43354 598 aa9.15□□□□□ -0.94
HPS4-217ENST00000496385 COPZ1P61923 177 aa9.15□□□□□ -0.94
HPS4-217ENST00000496385 GTF2BQ00403 316 aa9.15□□□□□ -0.94
HPS4-217ENST00000496385 DNASE1L3Q13609 305 aa9.15□□□□□ -0.94
HPS4-217ENST00000496385 TMEM132BQ14DG7 1078 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms