RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 VTI1BQ9UEU0 232 aa15.51■□□□□ 0.07
CALD1-222ENST00000495522 FBXO5Q9UKT4 447 aa15.51■□□□□ 0.07
CALD1-222ENST00000495522 ABT1Q9ULW3 272 aaKnown RBP15.51■□□□□ 0.07
CALD1-222ENST00000495522 ARHGAP26Q9UNA1 814 aa15.51■□□□□ 0.07
CALD1-222ENST00000495522 LRCH1Q9Y2L9 728 aa15.51■□□□□ 0.07
CALD1-222ENST00000495522 PLXNA3P51805 1871 aa15.51■□□□□ 0.07
CALD1-222ENST00000495522 A0A087X1B8 175 aa15.51■□□□□ 0.07
CALD1-222ENST00000495522 HEATR9A2RTY3 570 aa15.51■□□□□ 0.07
CALD1-222ENST00000495522 SLCO1B7G3V0H7 640 aa15.51■□□□□ 0.07
CALD1-222ENST00000495522 PEX11BO96011 259 aa15.51■□□□□ 0.07
CALD1-222ENST00000495522 PRKAR2AP13861 404 aaKnown RBP15.51■□□□□ 0.07
CALD1-222ENST00000495522 ITGAXP20702 1163 aa15.51■□□□□ 0.07
CALD1-222ENST00000495522 KPNA2P52292 529 aaKnown RBP15.51■□□□□ 0.07
CALD1-222ENST00000495522 POU4F1Q01851 419 aa15.51■□□□□ 0.07
CALD1-222ENST00000495522 CUL3Q13618 768 aa15.51■□□□□ 0.07
CALD1-222ENST00000495522 PCSK7Q16549 785 aa15.51■□□□□ 0.07
CALD1-222ENST00000495522 NOMO2Q5JPE7 1267 aa15.51■□□□□ 0.07
CALD1-222ENST00000495522 CLLU1OSQ5K130 101 aa15.51■□□□□ 0.07
CALD1-222ENST00000495522 NEPROQ6NW34 567 aa15.51■□□□□ 0.07
CALD1-222ENST00000495522 PGM2L1Q6PCE3 622 aa15.51■□□□□ 0.07
CALD1-222ENST00000495522 AAGABQ6PD74 315 aa15.51■□□□□ 0.07
CALD1-222ENST00000495522 KIAA0408Q6ZU52 694 aa15.51■□□□□ 0.07
CALD1-222ENST00000495522 FRMD7Q6ZUT3 714 aa15.51■□□□□ 0.07
CALD1-222ENST00000495522 SLC24A5Q71RS6 500 aa15.51■□□□□ 0.07
CALD1-222ENST00000495522 COLGALT2Q8IYK4 626 aa15.51■□□□□ 0.07
CALD1-222ENST00000495522 ZNF683Q8IZ20 524 aa15.51■□□□□ 0.07
CALD1-222ENST00000495522 STON2Q8WXE9 905 aa15.51■□□□□ 0.07
CALD1-222ENST00000495522 NXNL1Q96CM4 212 aa15.51■□□□□ 0.07
CALD1-222ENST00000495522 GPR78Q96P69 363 aa15.51■□□□□ 0.07
CALD1-222ENST00000495522 RTKNQ9BST9 563 aa15.51■□□□□ 0.07
CALD1-222ENST00000495522 OSBPL1AQ9BXW6 950 aa15.51■□□□□ 0.07
CALD1-222ENST00000495522 ZYG11BQ9C0D3 744 aa15.51■□□□□ 0.07
CALD1-222ENST00000495522 MRPL46Q9H2W6 279 aaKnown RBP15.51■□□□□ 0.07
CALD1-222ENST00000495522 ARNT2Q9HBZ2 717 aa15.51■□□□□ 0.07
CALD1-222ENST00000495522 FRMPD3Q5JV73 1810 aa15.5■□□□□ 0.07
CALD1-222ENST00000495522 LOC100653049A0A140TA62 436 aa15.5■□□□□ 0.07
CALD1-222ENST00000495522 TTC36A6NLP5 189 aa15.5■□□□□ 0.07
CALD1-222ENST00000495522 DLX3O60479 287 aa15.5■□□□□ 0.07
CALD1-222ENST00000495522 SMNDC1O75940 238 aaKnown RBP eCLIP15.5■□□□□ 0.07
CALD1-222ENST00000495522 KRT34O76011 436 aa15.5■□□□□ 0.07
CALD1-222ENST00000495522 OR1G1P47890 313 aa15.5■□□□□ 0.07
CALD1-222ENST00000495522 GPR15P49685 360 aa15.5■□□□□ 0.07
CALD1-222ENST00000495522 SLC12A2P55011 1212 aa15.5■□□□□ 0.07
CALD1-222ENST00000495522 ACAD11Q709F0 780 aa15.5■□□□□ 0.07
CALD1-222ENST00000495522 TFAP2DQ7Z6R9 452 aa15.5■□□□□ 0.07
CALD1-222ENST00000495522 RTN4RL1Q86UN2 441 aaPredicted RBP15.5■□□□□ 0.07
CALD1-222ENST00000495522 SLC25A41Q8N5S1 370 aa15.5■□□□□ 0.07
CALD1-222ENST00000495522 GABPB2Q8TAK5 448 aaPredicted RBP15.5■□□□□ 0.07
CALD1-222ENST00000495522 CALML6Q8TD86 181 aa15.5■□□□□ 0.07
CALD1-222ENST00000495522 ITFG2Q969R8 447 aa15.5■□□□□ 0.07
CALD1-222ENST00000495522 MOCOSQ96EN8 888 aa15.5■□□□□ 0.07
CALD1-222ENST00000495522 HMCESQ96FZ2 354 aa15.5■□□□□ 0.07
CALD1-222ENST00000495522 IMP4Q96G21 291 aaKnown RBP15.5■□□□□ 0.07
CALD1-222ENST00000495522 RANBP9Q96S59 729 aa15.5■□□□□ 0.07
CALD1-222ENST00000495522 CYP4F11Q9HBI6 524 aa15.5■□□□□ 0.07
CALD1-222ENST00000495522 ATP13A1Q9HD20 1204 aa15.5■□□□□ 0.07
CALD1-222ENST00000495522 NT5MQ9NPB1 228 aa15.5■□□□□ 0.07
CALD1-222ENST00000495522 TMEM248Q9NWD8 314 aa15.5■□□□□ 0.07
CALD1-222ENST00000495522 NDE1Q9NXR1 346 aa15.5■□□□□ 0.07
CALD1-222ENST00000495522 GMIPQ9P107 970 aa15.5■□□□□ 0.07
CALD1-222ENST00000495522 CDH22Q9UJ99 828 aa15.5■□□□□ 0.07
CALD1-222ENST00000495522 PCDHB5Q9Y5E4 795 aa15.5■□□□□ 0.07
CALD1-222ENST00000495522 TTC3P53804 2025 aa15.5■□□□□ 0.07
CALD1-222ENST00000495522 BPTFQ12830 3046 aa15.5■□□□□ 0.07
CALD1-222ENST00000495522 GOLGA8QA0A0J9YX86 632 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 GOLGA8OA6NCC3 632 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 GOLGA8NF8WBI6 632 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 TFEBP19484 476 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 CCR10P46092 362 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 TM4SF4P48230 202 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 SERPINH1P50454 418 aaKnown RBP15.49■□□□□ 0.07
CALD1-222ENST00000495522 EPHB1P54762 984 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 TAS2R39P59534 338 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 DLG1Q12959 904 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 MS4A13Q5J8X5 152 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 MARC1Q5VT66 337 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 DEFB107AQ8IZN7 70 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 ATP6V0D2Q8N8Y2 350 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 PDCD6IPQ8WUM4 868 aaKnown RBP15.49■□□□□ 0.07
CALD1-222ENST00000495522 CNDP1Q96KN2 507 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 FAM210AQ96ND0 272 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 MRPL57Q9BQC6 102 aaKnown RBP15.49■□□□□ 0.07
CALD1-222ENST00000495522 ACSS2Q9NR19 701 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 VPS45Q9NRW7 570 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.49■□□□□ 0.07
CALD1-222ENST00000495522 PRG3Q9Y2Y8 225 aaPredicted RBP15.49■□□□□ 0.07
CALD1-222ENST00000495522 TMEM88BA6NKF7 163 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 NEMP1O14524 444 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 GRID2O43424 1007 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 CKBP12277 381 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 CPB1P15086 417 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 GRK4P32298 578 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 MAGEA11P43364 429 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 ERFP50548 548 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 USP46P62068 366 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 MRPS35P82673 323 aaKnown RBP15.49■□□□□ 0.07
CALD1-222ENST00000495522 KLC1Q07866 573 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 ITKQ08881 620 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 EFEMP1Q12805 493 aa15.49■□□□□ 0.07
CALD1-222ENST00000495522 LSM12Q3MHD2 195 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms