RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 RPS21P63220 83 aaKnown RBP33.68■■■□□ 2.98
CBX4-203ENST00000494546 INAVAQ3KP66 663 aa33.68■■■□□ 2.98
CBX4-203ENST00000494546 KIAA1161Q6NSJ0 714 aa33.68■■■□□ 2.98
CBX4-203ENST00000494546 CHCHD4Q8N4Q1 142 aa33.68■■■□□ 2.98
CBX4-203ENST00000494546 ERVMER34-1Q9H9K5 563 aa33.68■■■□□ 2.98
CBX4-203ENST00000494546 PDFQ9HBH1 243 aa33.68■■■□□ 2.98
CBX4-203ENST00000494546 LHX3Q9UBR4 397 aa33.68■■■□□ 2.98
CBX4-203ENST00000494546 IP6K2Q9UHH9 426 aa33.68■■■□□ 2.98
CBX4-203ENST00000494546 APOBEC2Q9Y235 224 aaKnown RBP33.68■■■□□ 2.98
CBX4-203ENST00000494546 DFFAO00273 331 aa33.67■■■□□ 2.98
CBX4-203ENST00000494546 NEMP1O14524 444 aa33.67■■■□□ 2.98
CBX4-203ENST00000494546 HNRNPH3P31942 346 aaKnown RBP33.67■■■□□ 2.98
CBX4-203ENST00000494546 HCAR3P49019 387 aa33.67■■■□□ 2.98
CBX4-203ENST00000494546 BOLA3Q53S33 107 aa33.67■■■□□ 2.98
CBX4-203ENST00000494546 OXR1Q8N573 874 aa33.67■■■□□ 2.98
CBX4-203ENST00000494546 RAB7BQ96AH8 199 aa33.67■■■□□ 2.98
CBX4-203ENST00000494546 SLC17A9Q9BYT1 436 aa33.67■■■□□ 2.98
CBX4-203ENST00000494546 ITM2BQ9Y287 266 aa33.67■■■□□ 2.98
CBX4-203ENST00000494546 H3BRJ5 948 aa33.66■■■□□ 2.98
CBX4-203ENST00000494546 YKT6O15498 198 aa33.66■■■□□ 2.98
CBX4-203ENST00000494546 THEGLP0DJG4 465 aa33.66■■■□□ 2.98
CBX4-203ENST00000494546 DPYSQ14117 519 aa33.66■■■□□ 2.98
CBX4-203ENST00000494546 TRIM14Q14142 442 aa33.66■■■□□ 2.98
CBX4-203ENST00000494546 SLCO6A1Q86UG4 719 aa33.66■■■□□ 2.98
CBX4-203ENST00000494546 ARHGAP12Q8IWW6 846 aa33.66■■■□□ 2.98
CBX4-203ENST00000494546 NPWQ8N729 165 aa33.66■■■□□ 2.98
CBX4-203ENST00000494546 STAU2Q9NUL3 570 aaKnown RBP eCLIP33.66■■■□□ 2.98
CBX4-203ENST00000494546 GGT7Q9UJ14 662 aa33.66■■■□□ 2.98
CBX4-203ENST00000494546 MFHAS1Q9Y4C4 1052 aa33.66■■■□□ 2.98
CBX4-203ENST00000494546 CABIN1Q9Y6J0 2220 aa33.66■■■□□ 2.98
CBX4-203ENST00000494546 GOLGA8CPA6NN73 597 aa33.65■■■□□ 2.98
CBX4-203ENST00000494546 INSIG1O15503 277 aa33.65■■■□□ 2.98
CBX4-203ENST00000494546 EPHA8P29322 1005 aaPredicted RBP33.65■■■□□ 2.98
CBX4-203ENST00000494546 ARL4AP40617 200 aa33.65■■■□□ 2.98
CBX4-203ENST00000494546 CLDN2P57739 230 aa33.65■■■□□ 2.98
CBX4-203ENST00000494546 DPYSL2Q16555 572 aa33.65■■■□□ 2.98
CBX4-203ENST00000494546 LRRC73Q5JTD7 316 aa33.65■■■□□ 2.98
CBX4-203ENST00000494546 AFMIDQ63HM1 303 aa33.65■■■□□ 2.98
CBX4-203ENST00000494546 TTC7BQ86TV6 843 aa33.65■■■□□ 2.98
CBX4-203ENST00000494546 NIPA2Q8N8Q9 360 aa33.65■■■□□ 2.98
CBX4-203ENST00000494546 OR8K1Q8NGG5 319 aa33.65■■■□□ 2.98
CBX4-203ENST00000494546 SAP25Q8TEE9 199 aa33.65■■■□□ 2.98
CBX4-203ENST00000494546 SP110Q9HB58 689 aa33.65■■■□□ 2.98
CBX4-203ENST00000494546 KLK13Q9UKR3 277 aa33.65■■■□□ 2.98
CBX4-203ENST00000494546 MYO1FO00160 1098 aa33.64■■■□□ 2.98
CBX4-203ENST00000494546 TSPAN6O43657 245 aa33.64■■■□□ 2.98
CBX4-203ENST00000494546 PAK4O96013 591 aaPredicted RBP33.64■■■□□ 2.98
CBX4-203ENST00000494546 RARAP10276 462 aa33.64■■■□□ 2.98
CBX4-203ENST00000494546 FGL2Q14314 439 aa33.64■■■□□ 2.98
CBX4-203ENST00000494546 TXNRD3NBQ6F5E7 133 aa33.64■■■□□ 2.98
CBX4-203ENST00000494546 RAB44Q7Z6P3 723 aaPredicted RBP33.64■■■□□ 2.98
CBX4-203ENST00000494546 NENFQ9UMX5 172 aa33.64■■■□□ 2.98
CBX4-203ENST00000494546 TPRP12270 2363 aaKnown RBP33.63■■■□□ 2.97
CBX4-203ENST00000494546 IGLON5A6NGN9 336 aa33.63■■■□□ 2.97
CBX4-203ENST00000494546 PALMO75781 387 aa33.63■■■□□ 2.97
CBX4-203ENST00000494546 ATXN1LP0C7T5 689 aaKnown RBP33.63■■■□□ 2.97
CBX4-203ENST00000494546 SSR1P43307 286 aaKnown RBP33.63■■■□□ 2.97
CBX4-203ENST00000494546 RXRGP48443 463 aa33.63■■■□□ 2.97
CBX4-203ENST00000494546 BNIP3Q12983 259 aa33.63■■■□□ 2.97
CBX4-203ENST00000494546 SGCGQ13326 291 aa33.63■■■□□ 2.97
CBX4-203ENST00000494546 GCNT7Q6ZNI0 430 aa33.63■■■□□ 2.97
CBX4-203ENST00000494546 ARHGAP36Q6ZRI8 547 aa33.63■■■□□ 2.97
CBX4-203ENST00000494546 VSTM4Q8IW00 320 aa33.63■■■□□ 2.97
CBX4-203ENST00000494546 OR13H1Q8NG92 308 aa33.63■■■□□ 2.97
CBX4-203ENST00000494546 ADAMTS14Q8WXS8 1223 aa33.63■■■□□ 2.97
CBX4-203ENST00000494546 DNAJC7Q99615 494 aa33.63■■■□□ 2.97
CBX4-203ENST00000494546 CALN1Q9BXU9 219 aa33.63■■■□□ 2.97
CBX4-203ENST00000494546 CPEB1Q9BZB8 566 aaKnown RBP33.63■■■□□ 2.97
CBX4-203ENST00000494546 FTSJ1Q9UET6 329 aa33.63■■■□□ 2.97
CBX4-203ENST00000494546 NEUROG3Q9Y4Z2 214 aa33.63■■■□□ 2.97
CBX4-203ENST00000494546 TNFSF14O43557 240 aa33.62■■■□□ 2.97
CBX4-203ENST00000494546 PIGNO95427 931 aa33.62■■■□□ 2.97
CBX4-203ENST00000494546 TPM1P09493 284 aa33.62■■■□□ 2.97
CBX4-203ENST00000494546 AMPD1P23109 780 aa33.62■■■□□ 2.97
CBX4-203ENST00000494546 POLNQ7Z5Q5 900 aa33.62■■■□□ 2.97
CBX4-203ENST00000494546 LZTR1Q8N653 840 aa33.62■■■□□ 2.97
CBX4-203ENST00000494546 ZNF564Q8TBZ8 553 aaPredicted RBP33.62■■■□□ 2.97
CBX4-203ENST00000494546 DEF6Q9H4E7 631 aa33.62■■■□□ 2.97
CBX4-203ENST00000494546 ZNHIT6Q9NWK9 470 aaKnown RBP33.62■■■□□ 2.97
CBX4-203ENST00000494546 CTTNBP2NLQ9P2B4 639 aa33.62■■■□□ 2.97
CBX4-203ENST00000494546 ACACBO00763 2458 aa33.61■■■□□ 2.97
CBX4-203ENST00000494546 RAD51BO15315 384 aa33.61■■■□□ 2.97
CBX4-203ENST00000494546 SPINT1O43278 529 aa33.61■■■□□ 2.97
CBX4-203ENST00000494546 SLC25A11Q02978 314 aaKnown RBP33.61■■■□□ 2.97
CBX4-203ENST00000494546 SLC18A3Q16572 532 aa33.61■■■□□ 2.97
CBX4-203ENST00000494546 TSR1Q2NL82 804 aaKnown RBP33.61■■■□□ 2.97
CBX4-203ENST00000494546 ZSCAN30Q86W11 494 aa33.61■■■□□ 2.97
CBX4-203ENST00000494546 TP53INP2Q8IXH6 220 aa33.61■■■□□ 2.97
CBX4-203ENST00000494546 TEKT4Q8WW24 435 aa33.61■■■□□ 2.97
CBX4-203ENST00000494546 CSPG4P5Q96PW8 444 aa33.61■■■□□ 2.97
CBX4-203ENST00000494546 TOR4AQ9NXH8 423 aa33.61■■■□□ 2.97
CBX4-203ENST00000494546 A6NNZ2 444 aa33.6■■■□□ 2.97
CBX4-203ENST00000494546 C1QTNF9BB2RNN3 333 aa33.6■■■□□ 2.97
CBX4-203ENST00000494546 AREL1O15033 823 aa33.6■■■□□ 2.97
CBX4-203ENST00000494546 C1QTNF9P0C862 333 aa33.6■■■□□ 2.97
CBX4-203ENST00000494546 XPAP23025 273 aaPredicted RBP33.6■■■□□ 2.97
CBX4-203ENST00000494546 TMCO3Q6UWJ1 677 aa33.6■■■□□ 2.97
CBX4-203ENST00000494546 PTAR1Q7Z6K3 402 aaPredicted RBP33.6■■■□□ 2.97
CBX4-203ENST00000494546 ABI3BPQ7Z7G0 1075 aa33.6■■■□□ 2.97
CBX4-203ENST00000494546 EID2Q8N6I1 236 aa33.6■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms