RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 FAM96BQ9Y3D0 163 aa4.18□□□□□ -1.74
CLK1-213ENST00000492793 A0A087X0M5 115 aa4.17□□□□□ -1.74
CLK1-213ENST00000492793 A0A1B0GX30 115 aa4.17□□□□□ -1.74
CLK1-213ENST00000492793 PGPEP1LA6NFU8 196 aa4.17□□□□□ -1.74
CLK1-213ENST00000492793 ZNF814B7Z6K7 855 aa4.17□□□□□ -1.74
CLK1-213ENST00000492793 H0YGN5 161 aa4.17□□□□□ -1.74
CLK1-213ENST00000492793 TLX3O43711 291 aaPredicted RBP4.17□□□□□ -1.74
CLK1-213ENST00000492793 TIPRLO75663 272 aa4.17□□□□□ -1.74
CLK1-213ENST00000492793 TOP3BO95985 862 aaKnown RBP4.17□□□□□ -1.74
CLK1-213ENST00000492793 MMP3P08254 477 aa4.17□□□□□ -1.74
CLK1-213ENST00000492793 ENO3P13929 434 aaPredicted RBP4.17□□□□□ -1.74
CLK1-213ENST00000492793 PRF1P14222 555 aa4.17□□□□□ -1.74
CLK1-213ENST00000492793 PTPN2P17706 415 aa4.17□□□□□ -1.74
CLK1-213ENST00000492793 CAPN3P20807 821 aa4.17□□□□□ -1.74
CLK1-213ENST00000492793 PPP3CCP48454 512 aa4.17□□□□□ -1.74
CLK1-213ENST00000492793 ARF3P61204 181 aaPredicted RBP4.17□□□□□ -1.74
CLK1-213ENST00000492793 RPS3AP61247 264 aaKnown RBP4.17□□□□□ -1.74
CLK1-213ENST00000492793 ARF1P84077 181 aaKnown RBP4.17□□□□□ -1.74
CLK1-213ENST00000492793 SETQ01105 290 aaPredicted RBP4.17□□□□□ -1.74
CLK1-213ENST00000492793 SLC18A2Q05940 514 aa4.17□□□□□ -1.74
CLK1-213ENST00000492793 PPATQ06203 517 aa4.17□□□□□ -1.74
CLK1-213ENST00000492793 PTGR1Q14914 329 aa4.17□□□□□ -1.74
CLK1-213ENST00000492793 ARHGEF6Q15052 776 aa4.17□□□□□ -1.74
CLK1-213ENST00000492793 GSTA3Q16772 222 aa4.17□□□□□ -1.74
CLK1-213ENST00000492793 PRTGQ2VWP7 1150 aa4.17□□□□□ -1.74
CLK1-213ENST00000492793 HYIQ5T013 277 aa4.17□□□□□ -1.74
CLK1-213ENST00000492793 NUGGCQ68CJ6 796 aa4.17□□□□□ -1.74
CLK1-213ENST00000492793 ITPRIPL1Q6GPH6 555 aa4.17□□□□□ -1.74
CLK1-213ENST00000492793 TMEM71Q6P5X7 295 aa4.17□□□□□ -1.74
CLK1-213ENST00000492793 FAM83HQ6ZRV2 1179 aaPredicted RBP4.17□□□□□ -1.74
CLK1-213ENST00000492793 SLC16A12Q6ZSM3 486 aa4.17□□□□□ -1.74
CLK1-213ENST00000492793 TMTC3Q6ZXV5 915 aa4.17□□□□□ -1.74
CLK1-213ENST00000492793 GSTA5Q7RTV2 222 aa4.17□□□□□ -1.74
CLK1-213ENST00000492793 ZCCHC9Q8N567 271 aaKnown RBP4.17□□□□□ -1.74
CLK1-213ENST00000492793 ARFGAP1Q8N6T3 406 aa4.17□□□□□ -1.74
CLK1-213ENST00000492793 ANKRD52Q8NB46 1076 aa4.17□□□□□ -1.74
CLK1-213ENST00000492793 ZNF548Q8NEK5 533 aaPredicted RBP4.17□□□□□ -1.74
CLK1-213ENST00000492793 PIGOQ8TEQ8 1089 aa4.17□□□□□ -1.74
CLK1-213ENST00000492793 NR1H4Q96RI1 486 aaPredicted RBP4.17□□□□□ -1.74
CLK1-213ENST00000492793 BARD1Q99728 777 aaKnown RBP4.17□□□□□ -1.74
CLK1-213ENST00000492793 PIP5K1AQ99755 562 aa4.17□□□□□ -1.74
CLK1-213ENST00000492793 H2AFJQ9BTM1 129 aa4.17□□□□□ -1.74
CLK1-213ENST00000492793 MAP6D1Q9H9H5 199 aa4.17□□□□□ -1.74
CLK1-213ENST00000492793 PLEKHA5Q9HAU0 1116 aa4.17□□□□□ -1.74
CLK1-213ENST00000492793 DIAPH3Q9NSV4 1193 aa4.17□□□□□ -1.74
CLK1-213ENST00000492793 SPATS2LQ9NUQ6 558 aaKnown RBP4.17□□□□□ -1.74
CLK1-213ENST00000492793 BTBD3Q9Y2F9 522 aa4.17□□□□□ -1.74
CLK1-213ENST00000492793 CARD8Q9Y2G2 431 aa4.17□□□□□ -1.74
CLK1-213ENST00000492793 ADGRF5Q8IZF2 1346 aa4.17□□□□□ -1.74
CLK1-213ENST00000492793 TTC3P53804 2025 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 CKAP5Q14008 2032 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 A0A0G2JK05 382 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 AP3D1O14617 1153 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 LDLRAD4O15165 306 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 BCAT2O15382 392 aaPredicted RBP4.16□□□□□ -1.74
CLK1-213ENST00000492793 ZBED4O75132 1171 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 CNOT3O75175 753 aaKnown RBP4.16□□□□□ -1.74
CLK1-213ENST00000492793 RNASEH2AO75792 299 aaKnown RBP4.16□□□□□ -1.74
CLK1-213ENST00000492793 MTA2O94776 668 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 TMEM63AO94886 807 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 SEC31AO94979 1220 aaKnown RBP4.16□□□□□ -1.74
CLK1-213ENST00000492793 CBSLP0DN79 551 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 KRT10P13645 584 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 CHRNB2P17787 502 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 CTPS1P17812 591 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 PTGER1P34995 402 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 CBSP35520 551 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 CPOXP36551 454 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 RGS2P41220 211 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 CASP2P42575 452 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 RXRGP48443 463 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 ENTPD1P49961 510 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 NAP1L1P55209 391 aaKnown RBP4.16□□□□□ -1.74
CLK1-213ENST00000492793 TMEM115Q12893 351 aaPredicted RBP4.16□□□□□ -1.74
CLK1-213ENST00000492793 FRG1Q14331 258 aaKnown RBP4.16□□□□□ -1.74
CLK1-213ENST00000492793 HIST2H2ACQ16777 129 aaPredicted RBP4.16□□□□□ -1.74
CLK1-213ENST00000492793 EPHA10Q5JZY3 1008 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 WASHC2DQ5SRD0 308 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 PRAMEF19Q5SWL8 479 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 GPATCH4Q5T3I0 446 aaKnown RBP4.16□□□□□ -1.74
CLK1-213ENST00000492793 NCAPH2Q6IBW4 605 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 LRRC8EQ6NSJ5 796 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 CDC73Q6P1J9 531 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 INO80CQ6PI98 192 aaPredicted RBP4.16□□□□□ -1.74
CLK1-213ENST00000492793 TMED8Q6PL24 325 aaPredicted RBP4.16□□□□□ -1.74
CLK1-213ENST00000492793 KLHL24Q6TFL4 600 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 COLCA1Q6ZS62 124 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 ZDHHC23Q8IYP9 409 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 MMP21Q8N119 569 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 KDM1BQ8NB78 822 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 ZMIZ2Q8NF64 920 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 GJC3Q8NFK1 279 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 MPLKIPQ8TAP9 179 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 SLC35F5Q8WV83 523 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 COQ8BQ96D53 544 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 SDF4Q9BRK5 362 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 CHCHD6Q9BRQ6 235 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 FTOQ9C0B1 505 aaKnown RBP eCLIP4.16□□□□□ -1.74
CLK1-213ENST00000492793 ISCUQ9H1K1 167 aa4.16□□□□□ -1.74
CLK1-213ENST00000492793 CDT1Q9H211 546 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms