RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 CSNK1G3Q9Y6M4 447 aa8.51□□□□□ -1.05
SMARCB1-207ENST00000491967 FAM170AA1A519 330 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 TSPAN11A1L157 253 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 IGLON5A6NGN9 336 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 A6NNZ2 444 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 EIF3CLB5ME19 914 aaKnown RBP8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 TOR1BO14657 336 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 TPP1O14773 563 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 CCP110O43303 1012 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 PAK4O96013 591 aaPredicted RBP8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 GP1BAP07359 652 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 GZMAP12544 262 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 ATP1A3P13637 1013 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 JUPP14923 745 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 FERP16591 822 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 GKP32189 559 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 HNF1BP35680 557 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 ABL2P42684 1182 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 RABIFP47224 123 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 SUOXP51687 545 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 CLDN2P57739 230 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 TARDBPQ13148 414 aaKnown RBP eCLIP8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 AGERQ15109 404 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 CYTH1Q15438 398 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 TPRG1LQ5T0D9 272 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 AFMIDQ63HM1 303 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 PLEKHA7Q6IQ23 1121 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 RWDD4Q6NW29 188 aaKnown RBP8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 PPP1R2P3Q6NXS1 205 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 CYP4V2Q6ZWL3 525 aaPredicted RBP8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 DENND6BQ8NEG7 585 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 ANKRD20A12PQ8NF67 263 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 FNIP1Q8TF40 1166 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 SPOCK2Q92563 424 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 TBATAQ96M53 351 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 GBP4Q96PP9 640 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 EIF3CQ99613 913 aaKnown RBP8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 SELENOOQ9BVL4 669 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 CAAP1Q9H8G2 361 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 PDFQ9HBH1 243 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 FZD3Q9NPG1 666 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 AIPL1Q9NZN9 384 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 KLF15Q9UIH9 416 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 HPCAL4Q9UM19 191 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 SHROOM3Q8TF72 1996 aa8.5□□□□□ -1.05
SMARCB1-207ENST00000491967 ANKRD36A6QL64 1941 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 LRP4O75096 1905 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 A0A1W2PQC6 194 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 NEMP2A6NFY4 417 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 TMEM191CA6NGB0 347 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 RASA4BC9J798 803 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 K7ESM1 405 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 FGF10O15520 208 aaPredicted RBP8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 TEX33O43247 280 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 RASA4O43374 803 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 SDC3O75056 442 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 TMCC1O94876 653 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 MBD3O95983 291 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 CCDC172P0C7W6 258 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 HOXB3P14651 431 aaPredicted RBP8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 TIMP2P16035 220 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 EPHB2P29323 1055 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 ANP32AP39687 249 aaKnown RBP8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 PRKCIP41743 596 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 CSNK1DP48730 415 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 HCAR3P49019 387 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 DNA2P51530 1060 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 NDST2P52849 883 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 CLDN6P56747 220 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 HNRNPKP61978 463 aaKnown RBP eCLIP8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 EIF2B5Q13144 721 aaKnown RBP8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 KIF26BQ2KJY2 2108 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 TMEM52BQ4KMG9 183 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 EFHC2Q5JST6 749 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 CCDC183Q5T5S1 534 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 HES3Q5TGS1 186 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 DNAJC24Q6P3W2 148 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 GDPD4Q6W3E5 623 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 PDZD3Q86UT5 571 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 PARGQ86W56 976 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 PSTKQ8IV42 348 aaKnown RBP8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 OR6K2Q8NGY2 324 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 NXPE2Q96DL1 559 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 ARHGEF26Q96DR7 871 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 HMCESQ96FZ2 354 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 APOLD1Q96LR9 279 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 GDAP1L1Q96MZ0 367 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 KLHL32Q96NJ5 620 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 EPAS1Q99814 870 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 DUSP23Q9BVJ7 150 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 TM6SF2Q9BZW4 377 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 ZDHHC6Q9H6R6 413 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 TAS2R14Q9NYV8 317 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 LHX3Q9UBR4 397 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 GGT7Q9UJ14 662 aa8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 PNMA8BQ9ULN7 279 aaPredicted RBP8.49□□□□□ -1.05
SMARCB1-207ENST00000491967 BPTFQ12830 3046 aa8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 LOC400499M0QZD8 3231 aa8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 UNC13CQ8NB66 2214 aa8.48□□□□□ -1.05
SMARCB1-207ENST00000491967 A0A1B0GTH6 734 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms