RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 PRAMEF11O60813 436 aa20.03■□□□□ 0.8
SMC4-222ENST00000490207 EPHA8P29322 1005 aaPredicted RBP20.03■□□□□ 0.8
SMC4-222ENST00000490207 HNRNPH3P31942 346 aaKnown RBP20.03■□□□□ 0.8
SMC4-222ENST00000490207 EIF4A3P38919 411 aaKnown RBP20.03■□□□□ 0.8
SMC4-222ENST00000490207 ARRB1P49407 418 aaPredicted RBP20.03■□□□□ 0.8
SMC4-222ENST00000490207 PAPOLAP51003 745 aaKnown RBP20.03■□□□□ 0.8
SMC4-222ENST00000490207 RPS21P63220 83 aaKnown RBP20.03■□□□□ 0.8
SMC4-222ENST00000490207 MAPK8IP2Q13387 824 aaPredicted RBP20.03■□□□□ 0.8
SMC4-222ENST00000490207 DPYSQ14117 519 aa20.03■□□□□ 0.8
SMC4-222ENST00000490207 SHBQ15464 509 aa20.03■□□□□ 0.8
SMC4-222ENST00000490207 DPYSL2Q16555 572 aa20.03■□□□□ 0.8
SMC4-222ENST00000490207 GDPD4Q6W3E5 623 aa20.03■□□□□ 0.8
SMC4-222ENST00000490207 ZSCAN30Q86W11 494 aa20.03■□□□□ 0.8
SMC4-222ENST00000490207 GATAD2AQ86YP4 633 aa20.03■□□□□ 0.8
SMC4-222ENST00000490207 ARHGAP12Q8IWW6 846 aa20.03■□□□□ 0.8
SMC4-222ENST00000490207 NPWQ8N729 165 aa20.03■□□□□ 0.8
SMC4-222ENST00000490207 NIPA2Q8N8Q9 360 aa20.03■□□□□ 0.8
SMC4-222ENST00000490207 HSPH1Q92598 858 aa20.03■□□□□ 0.8
SMC4-222ENST00000490207 VOPP1Q96AW1 172 aa20.03■□□□□ 0.8
SMC4-222ENST00000490207 ERVMER34-1Q9H9K5 563 aa20.03■□□□□ 0.8
SMC4-222ENST00000490207 SP110Q9HB58 689 aa20.03■□□□□ 0.8
SMC4-222ENST00000490207 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.03■□□□□ 0.8
SMC4-222ENST00000490207 NENFQ9UMX5 172 aa20.03■□□□□ 0.8
SMC4-222ENST00000490207 APOBEC2Q9Y235 224 aaKnown RBP20.03■□□□□ 0.8
SMC4-222ENST00000490207 DFFAO00273 331 aa20.02■□□□□ 0.8
SMC4-222ENST00000490207 NEMP1O14524 444 aa20.02■□□□□ 0.8
SMC4-222ENST00000490207 THEGLP0DJG4 465 aa20.02■□□□□ 0.8
SMC4-222ENST00000490207 ARL4AP40617 200 aa20.02■□□□□ 0.8
SMC4-222ENST00000490207 HCAR3P49019 387 aa20.02■□□□□ 0.8
SMC4-222ENST00000490207 CYTH1Q15438 398 aa20.02■□□□□ 0.8
SMC4-222ENST00000490207 BOLA3Q53S33 107 aa20.02■□□□□ 0.8
SMC4-222ENST00000490207 AFMIDQ63HM1 303 aa20.02■□□□□ 0.8
SMC4-222ENST00000490207 GCNT7Q6ZNI0 430 aa20.02■□□□□ 0.8
SMC4-222ENST00000490207 ZNF564Q8TBZ8 553 aaPredicted RBP20.02■□□□□ 0.8
SMC4-222ENST00000490207 KLHDC7BQ96G42 594 aa20.02■□□□□ 0.8
SMC4-222ENST00000490207 FEM1CQ96JP0 617 aa20.02■□□□□ 0.8
SMC4-222ENST00000490207 DNAJC7Q99615 494 aa20.02■□□□□ 0.8
SMC4-222ENST00000490207 GGT7Q9UJ14 662 aa20.02■□□□□ 0.8
SMC4-222ENST00000490207 ITM2BQ9Y287 266 aa20.02■□□□□ 0.8
SMC4-222ENST00000490207 MFHAS1Q9Y4C4 1052 aa20.02■□□□□ 0.8
SMC4-222ENST00000490207 ACACBO00763 2458 aa20.01■□□□□ 0.79
SMC4-222ENST00000490207 INSIG1O15503 277 aa20.01■□□□□ 0.79
SMC4-222ENST00000490207 SPINT1O43278 529 aa20.01■□□□□ 0.79
SMC4-222ENST00000490207 TSPAN6O43657 245 aa20.01■□□□□ 0.79
SMC4-222ENST00000490207 ITGAVP06756 1048 aa20.01■□□□□ 0.79
SMC4-222ENST00000490207 TPM1P09493 284 aa20.01■□□□□ 0.79
SMC4-222ENST00000490207 SLC25A11Q02978 314 aaKnown RBP20.01■□□□□ 0.79
SMC4-222ENST00000490207 RAB44Q7Z6P3 723 aaPredicted RBP20.01■□□□□ 0.79
SMC4-222ENST00000490207 VSTM4Q8IW00 320 aa20.01■□□□□ 0.79
SMC4-222ENST00000490207 CHCHD4Q8N4Q1 142 aa20.01■□□□□ 0.79
SMC4-222ENST00000490207 PNPLA1Q8N8W4 532 aa20.01■□□□□ 0.79
SMC4-222ENST00000490207 SAP25Q8TEE9 199 aa20.01■□□□□ 0.79
SMC4-222ENST00000490207 TEKT4Q8WW24 435 aa20.01■□□□□ 0.79
SMC4-222ENST00000490207 SLC17A9Q9BYT1 436 aa20.01■□□□□ 0.79
SMC4-222ENST00000490207 DEF6Q9H4E7 631 aa20.01■□□□□ 0.79
SMC4-222ENST00000490207 FTSJ1Q9UET6 329 aa20.01■□□□□ 0.79
SMC4-222ENST00000490207 KLK13Q9UKR3 277 aa20.01■□□□□ 0.79
SMC4-222ENST00000490207 NEUROG3Q9Y4Z2 214 aa20.01■□□□□ 0.79
SMC4-222ENST00000490207 CHD8Q9HCK8 2581 aa20■□□□□ 0.79
SMC4-222ENST00000490207 MYO1FO00160 1098 aa20■□□□□ 0.79
SMC4-222ENST00000490207 PIGNO95427 931 aa20■□□□□ 0.79
SMC4-222ENST00000490207 RARAP10276 462 aa20■□□□□ 0.79
SMC4-222ENST00000490207 RXRGP48443 463 aa20■□□□□ 0.79
SMC4-222ENST00000490207 CLDN2P57739 230 aa20■□□□□ 0.79
SMC4-222ENST00000490207 FGL2Q14314 439 aa20■□□□□ 0.79
SMC4-222ENST00000490207 GRM3Q14832 879 aa20■□□□□ 0.79
SMC4-222ENST00000490207 SLC18A3Q16572 532 aa20■□□□□ 0.79
SMC4-222ENST00000490207 LRRC73Q5JTD7 316 aa20■□□□□ 0.79
SMC4-222ENST00000490207 TXNRD3NBQ6F5E7 133 aa20■□□□□ 0.79
SMC4-222ENST00000490207 ARHGAP36Q6ZRI8 547 aa20■□□□□ 0.79
SMC4-222ENST00000490207 POLNQ7Z5Q5 900 aa20■□□□□ 0.79
SMC4-222ENST00000490207 PTAR1Q7Z6K3 402 aaPredicted RBP20■□□□□ 0.79
SMC4-222ENST00000490207 LZTR1Q8N653 840 aa20■□□□□ 0.79
SMC4-222ENST00000490207 OR13H1Q8NG92 308 aa20■□□□□ 0.79
SMC4-222ENST00000490207 OR8K1Q8NGG5 319 aa20■□□□□ 0.79
SMC4-222ENST00000490207 ADAMTS14Q8WXS8 1223 aa20■□□□□ 0.79
SMC4-222ENST00000490207 CINPQ9BW66 212 aaPredicted RBP20■□□□□ 0.79
SMC4-222ENST00000490207 CALN1Q9BXU9 219 aa20■□□□□ 0.79
SMC4-222ENST00000490207 CPEB1Q9BZB8 566 aaKnown RBP20■□□□□ 0.79
SMC4-222ENST00000490207 ZNHIT6Q9NWK9 470 aaKnown RBP20■□□□□ 0.79
SMC4-222ENST00000490207 DKK3Q9UBP4 350 aa20■□□□□ 0.79
SMC4-222ENST00000490207 PTPRBP23467 1997 aa19.99■□□□□ 0.79
SMC4-222ENST00000490207 SHROOM3Q8TF72 1996 aa19.99■□□□□ 0.79
SMC4-222ENST00000490207 TPRP12270 2363 aaKnown RBP19.99■□□□□ 0.79
SMC4-222ENST00000490207 LRRK1Q38SD2 2015 aa19.99■□□□□ 0.79
SMC4-222ENST00000490207 GOLGA8CPA6NN73 597 aa19.99■□□□□ 0.79
SMC4-222ENST00000490207 A6NNZ2 444 aa19.99■□□□□ 0.79
SMC4-222ENST00000490207 PALMO75781 387 aa19.99■□□□□ 0.79
SMC4-222ENST00000490207 ATXN1LP0C7T5 689 aaKnown RBP19.99■□□□□ 0.79
SMC4-222ENST00000490207 IL10RBQ08334 325 aa19.99■□□□□ 0.79
SMC4-222ENST00000490207 KYAT3Q6YP21 454 aaKnown RBP19.99■□□□□ 0.79
SMC4-222ENST00000490207 ABI3BPQ7Z7G0 1075 aa19.99■□□□□ 0.79
SMC4-222ENST00000490207 SLCO6A1Q86UG4 719 aa19.99■□□□□ 0.79
SMC4-222ENST00000490207 FAM174AQ8TBP5 190 aa19.99■□□□□ 0.79
SMC4-222ENST00000490207 CTNNBL1Q8WYA6 563 aaPredicted RBP19.99■□□□□ 0.79
SMC4-222ENST00000490207 CSPG4P5Q96PW8 444 aa19.99■□□□□ 0.79
SMC4-222ENST00000490207 PCDH18Q9HCL0 1135 aa19.99■□□□□ 0.79
SMC4-222ENST00000490207 ABHD10Q9NUJ1 306 aa19.99■□□□□ 0.79
SMC4-222ENST00000490207 TOR4AQ9NXH8 423 aa19.99■□□□□ 0.79
SMC4-222ENST00000490207 CTTNBP2NLQ9P2B4 639 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms