RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 COL27A1Q8IZC6 1860 aaPredicted RBP16.14■□□□□ 0.17
ERGIC3-217ENST00000488935 MGAQ8IWI9 3026 aa16.13■□□□□ 0.17
ERGIC3-217ENST00000488935 FPGTO14772 594 aa16.13■□□□□ 0.17
ERGIC3-217ENST00000488935 C1QL1O75973 258 aa16.13■□□□□ 0.17
ERGIC3-217ENST00000488935 TMCC1O94876 653 aa16.13■□□□□ 0.17
ERGIC3-217ENST00000488935 PRKCGP05129 697 aa16.13■□□□□ 0.17
ERGIC3-217ENST00000488935 ALPPL2P10696 532 aa16.13■□□□□ 0.17
ERGIC3-217ENST00000488935 IGFALSP35858 605 aa16.13■□□□□ 0.17
ERGIC3-217ENST00000488935 HNRNPKP61978 463 aaKnown RBP eCLIP16.13■□□□□ 0.17
ERGIC3-217ENST00000488935 CXADRP78310 365 aa16.13■□□□□ 0.17
ERGIC3-217ENST00000488935 GABREP78334 506 aa16.13■□□□□ 0.17
ERGIC3-217ENST00000488935 POLD3Q15054 466 aaPredicted RBP16.13■□□□□ 0.17
ERGIC3-217ENST00000488935 ARL13BQ3SXY8 428 aa16.13■□□□□ 0.17
ERGIC3-217ENST00000488935 ZNF805Q5CZA5 627 aa16.13■□□□□ 0.17
ERGIC3-217ENST00000488935 PERM1Q5SV97 790 aa16.13■□□□□ 0.17
ERGIC3-217ENST00000488935 FOXR1Q6PIV2 292 aa16.13■□□□□ 0.17
ERGIC3-217ENST00000488935 EFL1Q7Z2Z2 1120 aaKnown RBP16.13■□□□□ 0.17
ERGIC3-217ENST00000488935 TTC7BQ86TV6 843 aa16.13■□□□□ 0.17
ERGIC3-217ENST00000488935 DNAAF5Q86Y56 855 aa16.13■□□□□ 0.17
ERGIC3-217ENST00000488935 OR2AP1Q8NGE2 309 aa16.13■□□□□ 0.17
ERGIC3-217ENST00000488935 SNIP1Q8TAD8 396 aaKnown RBP16.13■□□□□ 0.17
ERGIC3-217ENST00000488935 PCMTD1Q96MG8 357 aaPredicted RBP16.13■□□□□ 0.17
ERGIC3-217ENST00000488935 ABCG4Q9H172 646 aa16.13■□□□□ 0.17
ERGIC3-217ENST00000488935 FANCLQ9NW38 375 aa16.13■□□□□ 0.17
ERGIC3-217ENST00000488935 ADAM22Q9P0K1 906 aa16.13■□□□□ 0.17
ERGIC3-217ENST00000488935 DACH1Q9UI36 760 aa16.13■□□□□ 0.17
ERGIC3-217ENST00000488935 AGRPO00253 132 aa16.12■□□□□ 0.17
ERGIC3-217ENST00000488935 MUSKO15146 869 aa16.12■□□□□ 0.17
ERGIC3-217ENST00000488935 AQP9O43315 295 aa16.12■□□□□ 0.17
ERGIC3-217ENST00000488935 AP1G1O43747 822 aa16.12■□□□□ 0.17
ERGIC3-217ENST00000488935 CREB3O43889 395 aa16.12■□□□□ 0.17
ERGIC3-217ENST00000488935 RAMP2O60895 175 aa16.12■□□□□ 0.17
ERGIC3-217ENST00000488935 PIGNO95427 931 aa16.12■□□□□ 0.17
ERGIC3-217ENST00000488935 KRT3P12035 628 aa16.12■□□□□ 0.17
ERGIC3-217ENST00000488935 UNGP13051 313 aaPredicted RBP16.12■□□□□ 0.17
ERGIC3-217ENST00000488935 NME1P15531 152 aaKnown RBP16.12■□□□□ 0.17
ERGIC3-217ENST00000488935 TIMP2P16035 220 aa16.12■□□□□ 0.17
ERGIC3-217ENST00000488935 EEF1GP26641 437 aaKnown RBP16.12■□□□□ 0.17
ERGIC3-217ENST00000488935 ACTN2P35609 894 aa16.12■□□□□ 0.17
ERGIC3-217ENST00000488935 RABIFP47224 123 aa16.12■□□□□ 0.17
ERGIC3-217ENST00000488935 ADKP55263 362 aaKnown RBP16.12■□□□□ 0.17
ERGIC3-217ENST00000488935 SNRPD1P62314 119 aaKnown RBP16.12■□□□□ 0.17
ERGIC3-217ENST00000488935 TLE3Q04726 772 aa16.12■□□□□ 0.17
ERGIC3-217ENST00000488935 C1QBPQ07021 282 aaKnown RBP16.12■□□□□ 0.17
ERGIC3-217ENST00000488935 SYCP1Q15431 976 aa16.12■□□□□ 0.17
ERGIC3-217ENST00000488935 GDPD4Q6W3E5 623 aa16.12■□□□□ 0.17
ERGIC3-217ENST00000488935 PARGQ86W56 976 aa16.12■□□□□ 0.17
ERGIC3-217ENST00000488935 SLC39A7Q92504 469 aa16.12■□□□□ 0.17
ERGIC3-217ENST00000488935 BAP1Q92560 729 aa16.12■□□□□ 0.17
ERGIC3-217ENST00000488935 HMCESQ96FZ2 354 aa16.12■□□□□ 0.17
ERGIC3-217ENST00000488935 LGMNQ99538 433 aa16.12■□□□□ 0.17
ERGIC3-217ENST00000488935 SELENOOQ9BVL4 669 aa16.12■□□□□ 0.17
ERGIC3-217ENST00000488935 CPNE5Q9HCH3 593 aa16.12■□□□□ 0.17
ERGIC3-217ENST00000488935 GPATCH2LQ9NWQ4 482 aa16.12■□□□□ 0.17
ERGIC3-217ENST00000488935 SIK3Q9Y2K2 1263 aa16.12■□□□□ 0.17
ERGIC3-217ENST00000488935 NEMP2A6NFY4 417 aa16.11■□□□□ 0.17
ERGIC3-217ENST00000488935 CCP110O43303 1012 aa16.11■□□□□ 0.17
ERGIC3-217ENST00000488935 TSPAN6O43657 245 aa16.11■□□□□ 0.17
ERGIC3-217ENST00000488935 KDELR3O43731 214 aa16.11■□□□□ 0.17
ERGIC3-217ENST00000488935 POP4O95707 220 aaKnown RBP16.11■□□□□ 0.17
ERGIC3-217ENST00000488935 GSRP00390 522 aa16.11■□□□□ 0.17
ERGIC3-217ENST00000488935 KRT10P13645 584 aa16.11■□□□□ 0.17
ERGIC3-217ENST00000488935 GPD1P21695 349 aa16.11■□□□□ 0.17
ERGIC3-217ENST00000488935 PTPN9P43378 593 aa16.11■□□□□ 0.17
ERGIC3-217ENST00000488935 MAPKAPK2P49137 400 aa16.11■□□□□ 0.17
ERGIC3-217ENST00000488935 PFN3P60673 137 aa16.11■□□□□ 0.17
ERGIC3-217ENST00000488935 RPL7AP62424 266 aaKnown RBP16.11■□□□□ 0.17
ERGIC3-217ENST00000488935 CLEC16AQ2KHT3 1053 aa16.11■□□□□ 0.17
ERGIC3-217ENST00000488935 KLHL40Q2TBA0 621 aa16.11■□□□□ 0.17
ERGIC3-217ENST00000488935 PRRT3Q5FWE3 981 aa16.11■□□□□ 0.17
ERGIC3-217ENST00000488935 C3orf38Q5JPI3 329 aa16.11■□□□□ 0.17
ERGIC3-217ENST00000488935 CDKAL1Q5VV42 579 aa16.11■□□□□ 0.17
ERGIC3-217ENST00000488935 ARCQ7LC44 396 aa16.11■□□□□ 0.17
ERGIC3-217ENST00000488935 ZNF677Q86XU0 584 aa16.11■□□□□ 0.17
ERGIC3-217ENST00000488935 CENPIQ92674 756 aaPredicted RBP16.11■□□□□ 0.17
ERGIC3-217ENST00000488935 ISG20Q96AZ6 181 aaKnown RBP16.11■□□□□ 0.17
ERGIC3-217ENST00000488935 CENPTQ96BT3 561 aa16.11■□□□□ 0.17
ERGIC3-217ENST00000488935 ATXN7L3BQ96GX2 97 aa16.11■□□□□ 0.17
ERGIC3-217ENST00000488935 DEPDC7Q96QD5 511 aa16.11■□□□□ 0.17
ERGIC3-217ENST00000488935 UBL7Q96S82 380 aaPredicted RBP16.11■□□□□ 0.17
ERGIC3-217ENST00000488935 CLPBQ9H078 707 aa16.11■□□□□ 0.17
ERGIC3-217ENST00000488935 MAGEH1Q9H213 219 aa16.11■□□□□ 0.17
ERGIC3-217ENST00000488935 SYNDIG1Q9H7V2 258 aa16.11■□□□□ 0.17
ERGIC3-217ENST00000488935 LMBRD1Q9NUN5 540 aa16.11■□□□□ 0.17
ERGIC3-217ENST00000488935 HPCAL4Q9UM19 191 aa16.11■□□□□ 0.17
ERGIC3-217ENST00000488935 SATB2Q9UPW6 733 aa16.11■□□□□ 0.17
ERGIC3-217ENST00000488935 ANKRD36A6QL64 1941 aa16.1■□□□□ 0.17
ERGIC3-217ENST00000488935 GCN1Q92616 2671 aaKnown RBP16.1■□□□□ 0.17
ERGIC3-217ENST00000488935 AREL1O15033 823 aa16.1■□□□□ 0.17
ERGIC3-217ENST00000488935 EPHB2P29323 1055 aa16.1■□□□□ 0.17
ERGIC3-217ENST00000488935 STAT1P42224 750 aa16.1■□□□□ 0.17
ERGIC3-217ENST00000488935 NSFP46459 744 aaKnown RBP16.1■□□□□ 0.17
ERGIC3-217ENST00000488935 COPB1P53618 953 aaKnown RBP16.1■□□□□ 0.17
ERGIC3-217ENST00000488935 RHOAP61586 193 aa16.1■□□□□ 0.17
ERGIC3-217ENST00000488935 NRG1Q02297 640 aaPredicted RBP16.1■□□□□ 0.17
ERGIC3-217ENST00000488935 CYTH1Q15438 398 aa16.1■□□□□ 0.17
ERGIC3-217ENST00000488935 ACBD5Q5T8D3 534 aaPredicted RBP16.1■□□□□ 0.17
ERGIC3-217ENST00000488935 ARHGAP40Q5TG30 622 aa16.1■□□□□ 0.17
ERGIC3-217ENST00000488935 FAXCQ5TGI0 409 aa16.1■□□□□ 0.17
ERGIC3-217ENST00000488935 KCTD16Q68DU8 428 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms