RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 SCAIQ8N9R8 606 aa2.76□□□□□ -1.97
CCDC93-209ENST00000488908 CADM4Q8NFZ8 388 aa2.76□□□□□ -1.97
CCDC93-209ENST00000488908 BRI3BPQ8WY22 251 aa2.76□□□□□ -1.97
CCDC93-209ENST00000488908 ATOH1Q92858 354 aaPredicted RBP2.76□□□□□ -1.97
CCDC93-209ENST00000488908 C3orf30Q96M34 536 aa2.76□□□□□ -1.97
CCDC93-209ENST00000488908 TTC14Q96N46 770 aa2.76□□□□□ -1.97
CCDC93-209ENST00000488908 MVB12BQ9H7P6 319 aa2.76□□□□□ -1.97
CCDC93-209ENST00000488908 LRRC4Q9HBW1 653 aa2.76□□□□□ -1.97
CCDC93-209ENST00000488908 DDX21Q9NR30 783 aaKnown RBP eCLIP2.76□□□□□ -1.97
CCDC93-209ENST00000488908 ABCF3Q9NUQ8 709 aa2.76□□□□□ -1.97
CCDC93-209ENST00000488908 LZTS1Q9Y250 596 aa2.76□□□□□ -1.97
CCDC93-209ENST00000488908 CEP83Q9Y592 693 aa2.76□□□□□ -1.97
CCDC93-209ENST00000488908 EID1Q9Y6B2 187 aa2.76□□□□□ -1.97
CCDC93-209ENST00000488908 CACNA1FO60840 1977 aa2.76□□□□□ -1.97
CCDC93-209ENST00000488908 LILRA5A6NI73 299 aa2.75□□□□□ -1.97
CCDC93-209ENST00000488908 DNPH1O43598 174 aa2.75□□□□□ -1.97
CCDC93-209ENST00000488908 SRCP12931 536 aa2.75□□□□□ -1.97
CCDC93-209ENST00000488908 IL15P40933 162 aaPredicted RBP2.75□□□□□ -1.97
CCDC93-209ENST00000488908 LMO4P61968 165 aa2.75□□□□□ -1.97
CCDC93-209ENST00000488908 ZNF155Q12901 538 aaPredicted RBP2.75□□□□□ -1.97
CCDC93-209ENST00000488908 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
CCDC93-209ENST00000488908 FAM122CQ6P4D5 195 aa2.75□□□□□ -1.97
CCDC93-209ENST00000488908 GALNT7Q86SF2 657 aa2.75□□□□□ -1.97
CCDC93-209ENST00000488908 SLC9B2Q86UD5 537 aa2.75□□□□□ -1.97
CCDC93-209ENST00000488908 NFE4Q86UQ8 179 aa2.75□□□□□ -1.97
CCDC93-209ENST00000488908 CCDC105Q8IYK2 499 aa2.75□□□□□ -1.97
CCDC93-209ENST00000488908 METTL27Q8N6F8 245 aaPredicted RBP2.75□□□□□ -1.97
CCDC93-209ENST00000488908 CNBD1Q8NA66 436 aa2.75□□□□□ -1.97
CCDC93-209ENST00000488908 TANKQ92844 425 aa2.75□□□□□ -1.97
CCDC93-209ENST00000488908 LGALS12Q96DT0 336 aa2.75□□□□□ -1.97
CCDC93-209ENST00000488908 ZNF599Q96NL3 588 aa2.75□□□□□ -1.97
CCDC93-209ENST00000488908 TP63Q9H3D4 680 aaPredicted RBP2.75□□□□□ -1.97
CCDC93-209ENST00000488908 GRHL1Q9NZI5 618 aa2.75□□□□□ -1.97
CCDC93-209ENST00000488908 UPB1Q9UBR1 384 aa2.75□□□□□ -1.97
CCDC93-209ENST00000488908 TCEAL9Q9UHQ7 104 aa2.75□□□□□ -1.97
CCDC93-209ENST00000488908 SLCO3A1Q9UIG8 710 aa2.75□□□□□ -1.97
CCDC93-209ENST00000488908 DHDHQ9UQ10 334 aa2.75□□□□□ -1.97
CCDC93-209ENST00000488908 GREB1LQ9C091 1923 aaPredicted RBP2.75□□□□□ -1.97
CCDC93-209ENST00000488908 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.74□□□□□ -1.97
CCDC93-209ENST00000488908 A0A1W2PNU3 283 aaPredicted RBP2.74□□□□□ -1.97
CCDC93-209ENST00000488908 ANKRD62A6NC57 917 aa2.74□□□□□ -1.97
CCDC93-209ENST00000488908 SYN3O14994 580 aa2.74□□□□□ -1.97
CCDC93-209ENST00000488908 TSPAN6O43657 245 aa2.74□□□□□ -1.97
CCDC93-209ENST00000488908 CRLF1O75462 422 aa2.74□□□□□ -1.97
CCDC93-209ENST00000488908 HEXIM1O94992 359 aaKnown RBP2.74□□□□□ -1.97
CCDC93-209ENST00000488908 TFRCP02786 760 aaKnown RBP2.74□□□□□ -1.97
CCDC93-209ENST00000488908 CD53P19397 219 aa2.74□□□□□ -1.97
CCDC93-209ENST00000488908 DRG2P55039 364 aaKnown RBP2.74□□□□□ -1.97
CCDC93-209ENST00000488908 LPIN1Q14693 890 aa2.74□□□□□ -1.97
CCDC93-209ENST00000488908 BTBD16Q32M84 506 aa2.74□□□□□ -1.97
CCDC93-209ENST00000488908 TRIM60Q495X7 471 aa2.74□□□□□ -1.97
CCDC93-209ENST00000488908 ZNF484Q5JVG2 852 aa2.74□□□□□ -1.97
CCDC93-209ENST00000488908 FAM209BQ5JX69 171 aa2.74□□□□□ -1.97
CCDC93-209ENST00000488908 SUSD1Q6UWL2 747 aa2.74□□□□□ -1.97
CCDC93-209ENST00000488908 STXBP4Q6ZWJ1 553 aa2.74□□□□□ -1.97
CCDC93-209ENST00000488908 MB21D2Q8IYB1 491 aaPredicted RBP2.74□□□□□ -1.97
CCDC93-209ENST00000488908 ADAD2Q8NCV1 583 aaKnown RBP2.74□□□□□ -1.97
CCDC93-209ENST00000488908 DEPTORQ8TB45 409 aa2.74□□□□□ -1.97
CCDC93-209ENST00000488908 SLC2A12Q8TD20 617 aa2.74□□□□□ -1.97
CCDC93-209ENST00000488908 IPO4Q8TEX9 1081 aaKnown RBP2.74□□□□□ -1.97
CCDC93-209ENST00000488908 TMEM19Q96HH6 336 aa2.74□□□□□ -1.97
CCDC93-209ENST00000488908 CSF3RQ99062 836 aa2.74□□□□□ -1.97
CCDC93-209ENST00000488908 PRPF18Q99633 342 aaKnown RBP2.74□□□□□ -1.97
CCDC93-209ENST00000488908 EGFL8Q99944 293 aa2.74□□□□□ -1.97
CCDC93-209ENST00000488908 FBXO40Q9UH90 709 aa2.74□□□□□ -1.97
CCDC93-209ENST00000488908 PRSS21Q9Y6M0 314 aa2.74□□□□□ -1.97
CCDC93-209ENST00000488908 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.73□□□□□ -1.97
CCDC93-209ENST00000488908 TARSL2A2RTX5 802 aaKnown RBP2.73□□□□□ -1.97
CCDC93-209ENST00000488908 PMS2P5A8MQ11 134 aa2.73□□□□□ -1.97
CCDC93-209ENST00000488908 ZNF587BE7ETH6 402 aa2.73□□□□□ -1.97
CCDC93-209ENST00000488908 CAPN9O14815 690 aa2.73□□□□□ -1.97
CCDC93-209ENST00000488908 PIP5K1BO14986 540 aa2.73□□□□□ -1.97
CCDC93-209ENST00000488908 STRNO43815 780 aa2.73□□□□□ -1.97
CCDC93-209ENST00000488908 CYP4B1P13584 511 aa2.73□□□□□ -1.97
CCDC93-209ENST00000488908 FMO5P49326 533 aa2.73□□□□□ -1.97
CCDC93-209ENST00000488908 RPS6KA3P51812 740 aa2.73□□□□□ -1.97
CCDC93-209ENST00000488908 KRTAP10-8P60410 259 aa2.73□□□□□ -1.97
CCDC93-209ENST00000488908 OASLQ15646 514 aaKnown RBP2.73□□□□□ -1.97
CCDC93-209ENST00000488908 ZNF876PQ49A33 203 aa2.73□□□□□ -1.97
CCDC93-209ENST00000488908 DSG4Q86SJ6 1040 aa2.73□□□□□ -1.97
CCDC93-209ENST00000488908 SATL1Q86VE3 508 aa2.73□□□□□ -1.97
CCDC93-209ENST00000488908 GATAD2AQ86YP4 633 aa2.73□□□□□ -1.97
CCDC93-209ENST00000488908 OR4N2Q8NGD1 307 aa2.73□□□□□ -1.97
CCDC93-209ENST00000488908 RSC1A1Q92681 617 aa2.73□□□□□ -1.97
CCDC93-209ENST00000488908 ARRDC3Q96B67 414 aa2.73□□□□□ -1.97
CCDC93-209ENST00000488908 TIFAQ96CG3 184 aa2.73□□□□□ -1.97
CCDC93-209ENST00000488908 PIGSQ96S52 555 aa2.73□□□□□ -1.97
CCDC93-209ENST00000488908 TBCBQ99426 244 aa2.73□□□□□ -1.97
CCDC93-209ENST00000488908 UBXN6Q9BZV1 441 aa2.73□□□□□ -1.97
CCDC93-209ENST00000488908 ACAD9Q9H845 621 aa2.73□□□□□ -1.97
CCDC93-209ENST00000488908 WDR6Q9NNW5 1121 aaKnown RBP2.73□□□□□ -1.97
CCDC93-209ENST00000488908 KLQ9UEF7 1012 aa2.73□□□□□ -1.97
CCDC93-209ENST00000488908 FAM90A18PA6NE21 464 aa2.72□□□□□ -1.97
CCDC93-209ENST00000488908 FAM90A16PA6NEW6 464 aa2.72□□□□□ -1.97
CCDC93-209ENST00000488908 FAM90A9PA6NNJ1 464 aa2.72□□□□□ -1.97
CCDC93-209ENST00000488908 EFCAB8A8MWE9 144 aa2.72□□□□□ -1.97
CCDC93-209ENST00000488908 FAM90A5PA8MXJ8 464 aa2.72□□□□□ -1.97
CCDC93-209ENST00000488908 FAM157AC9JC47 383 aa2.72□□□□□ -1.97
CCDC93-209ENST00000488908 NCK2O43639 380 aa2.72□□□□□ -1.97
CCDC93-209ENST00000488908 CBX6O95503 412 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms