RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 CDC6Q99741 560 aa18■□□□□ 0.47
ITGB1-215ENST00000488494 NCAPGQ9BPX3 1015 aa18■□□□□ 0.47
ITGB1-215ENST00000488494 SLC39A8Q9C0K1 460 aa18■□□□□ 0.47
ITGB1-215ENST00000488494 CWC15Q9P013 229 aaKnown RBP18■□□□□ 0.47
ITGB1-215ENST00000488494 GGT7Q9UJ14 662 aa18■□□□□ 0.47
ITGB1-215ENST00000488494 KLK13Q9UKR3 277 aa18■□□□□ 0.47
ITGB1-215ENST00000488494 NENFQ9UMX5 172 aa18■□□□□ 0.47
ITGB1-215ENST00000488494 USP24Q9UPU5 2620 aa18■□□□□ 0.47
ITGB1-215ENST00000488494 MAP1BP46821 2468 aaKnown RBP17.99■□□□□ 0.47
ITGB1-215ENST00000488494 ARHGAP42A6NI28 874 aa17.99■□□□□ 0.47
ITGB1-215ENST00000488494 H3BRJ5 948 aa17.99■□□□□ 0.47
ITGB1-215ENST00000488494 DFFAO00273 331 aa17.99■□□□□ 0.47
ITGB1-215ENST00000488494 NEMP1O14524 444 aa17.99■□□□□ 0.47
ITGB1-215ENST00000488494 SPINT1O43278 529 aa17.99■□□□□ 0.47
ITGB1-215ENST00000488494 MAGEC1O60732 1142 aa17.99■□□□□ 0.47
ITGB1-215ENST00000488494 TRIM16O95361 564 aa17.99■□□□□ 0.47
ITGB1-215ENST00000488494 HNRNPH3P31942 346 aaKnown RBP17.99■□□□□ 0.47
ITGB1-215ENST00000488494 EIF4A3P38919 411 aaKnown RBP17.99■□□□□ 0.47
ITGB1-215ENST00000488494 ZNF135P52742 658 aaPredicted RBP17.99■□□□□ 0.47
ITGB1-215ENST00000488494 CLDN2P57739 230 aa17.99■□□□□ 0.47
ITGB1-215ENST00000488494 RPS21P63220 83 aaKnown RBP17.99■□□□□ 0.47
ITGB1-215ENST00000488494 PIGHQ14442 188 aaPredicted RBP17.99■□□□□ 0.47
ITGB1-215ENST00000488494 ACAP1Q15027 740 aa17.99■□□□□ 0.47
ITGB1-215ENST00000488494 CYTH1Q15438 398 aa17.99■□□□□ 0.47
ITGB1-215ENST00000488494 DPYSL2Q16555 572 aa17.99■□□□□ 0.47
ITGB1-215ENST00000488494 CCDC122Q5T0U0 273 aa17.99■□□□□ 0.47
ITGB1-215ENST00000488494 AFMIDQ63HM1 303 aa17.99■□□□□ 0.47
ITGB1-215ENST00000488494 GDPD4Q6W3E5 623 aa17.99■□□□□ 0.47
ITGB1-215ENST00000488494 GCNT7Q6ZNI0 430 aa17.99■□□□□ 0.47
ITGB1-215ENST00000488494 CHCHD4Q8N4Q1 142 aa17.99■□□□□ 0.47
ITGB1-215ENST00000488494 OXR1Q8N573 874 aa17.99■□□□□ 0.47
ITGB1-215ENST00000488494 NIPA2Q8N8Q9 360 aa17.99■□□□□ 0.47
ITGB1-215ENST00000488494 ERVMER34-1Q9H9K5 563 aa17.99■□□□□ 0.47
ITGB1-215ENST00000488494 IP6K2Q9UHH9 426 aa17.99■□□□□ 0.47
ITGB1-215ENST00000488494 APOBEC2Q9Y235 224 aaKnown RBP17.99■□□□□ 0.47
ITGB1-215ENST00000488494 MFHAS1Q9Y4C4 1052 aa17.99■□□□□ 0.47
ITGB1-215ENST00000488494 KNL1Q8NG31 2342 aa17.99■□□□□ 0.47
ITGB1-215ENST00000488494 GOLGA8CPA6NN73 597 aa17.98■□□□□ 0.47
ITGB1-215ENST00000488494 INSIG1O15503 277 aa17.98■□□□□ 0.47
ITGB1-215ENST00000488494 PIGNO95427 931 aa17.98■□□□□ 0.47
ITGB1-215ENST00000488494 ITGAVP06756 1048 aa17.98■□□□□ 0.47
ITGB1-215ENST00000488494 ATXN1LP0C7T5 689 aaKnown RBP17.98■□□□□ 0.47
ITGB1-215ENST00000488494 THEGLP0DJG4 465 aa17.98■□□□□ 0.47
ITGB1-215ENST00000488494 ARL4AP40617 200 aa17.98■□□□□ 0.47
ITGB1-215ENST00000488494 SLC25A11Q02978 314 aaKnown RBP17.98■□□□□ 0.47
ITGB1-215ENST00000488494 RAD51Q06609 339 aa17.98■□□□□ 0.47
ITGB1-215ENST00000488494 FGL2Q14314 439 aa17.98■□□□□ 0.47
ITGB1-215ENST00000488494 TXNRD3NBQ6F5E7 133 aa17.98■□□□□ 0.47
ITGB1-215ENST00000488494 PTAR1Q7Z6K3 402 aaPredicted RBP17.98■□□□□ 0.47
ITGB1-215ENST00000488494 RAB44Q7Z6P3 723 aaPredicted RBP17.98■□□□□ 0.47
ITGB1-215ENST00000488494 OR13H1Q8NG92 308 aa17.98■□□□□ 0.47
ITGB1-215ENST00000488494 SAP25Q8TEE9 199 aa17.98■□□□□ 0.47
ITGB1-215ENST00000488494 RAB7BQ96AH8 199 aa17.98■□□□□ 0.47
ITGB1-215ENST00000488494 KLHDC7BQ96G42 594 aa17.98■□□□□ 0.47
ITGB1-215ENST00000488494 DNAJC7Q99615 494 aa17.98■□□□□ 0.47
ITGB1-215ENST00000488494 CALN1Q9BXU9 219 aa17.98■□□□□ 0.47
ITGB1-215ENST00000488494 SP110Q9HB58 689 aa17.98■□□□□ 0.47
ITGB1-215ENST00000488494 TOR4AQ9NXH8 423 aa17.98■□□□□ 0.47
ITGB1-215ENST00000488494 FTSJ1Q9UET6 329 aa17.98■□□□□ 0.47
ITGB1-215ENST00000488494 NEUROG3Q9Y4Z2 214 aa17.98■□□□□ 0.47
ITGB1-215ENST00000488494 KMT2BQ9UMN6 2715 aaPredicted RBP17.98■□□□□ 0.47
ITGB1-215ENST00000488494 PCNX2A6NKB5 2137 aa17.98■□□□□ 0.47
ITGB1-215ENST00000488494 ASPMQ8IZT6 3477 aa17.97■□□□□ 0.47
ITGB1-215ENST00000488494 A6NNZ2 444 aa17.97■□□□□ 0.47
ITGB1-215ENST00000488494 RAD51BO15315 384 aa17.97■□□□□ 0.47
ITGB1-215ENST00000488494 TSPAN6O43657 245 aa17.97■□□□□ 0.47
ITGB1-215ENST00000488494 SDC3O75056 442 aa17.97■□□□□ 0.47
ITGB1-215ENST00000488494 HCAR3P49019 387 aa17.97■□□□□ 0.47
ITGB1-215ENST00000488494 UNQ6494/PRO21346Q6UXR6 183 aa17.97■□□□□ 0.47
ITGB1-215ENST00000488494 ARHGAP36Q6ZRI8 547 aa17.97■□□□□ 0.47
ITGB1-215ENST00000488494 ABI3BPQ7Z7G0 1075 aa17.97■□□□□ 0.47
ITGB1-215ENST00000488494 SLCO6A1Q86UG4 719 aa17.97■□□□□ 0.47
ITGB1-215ENST00000488494 VSTM4Q8IW00 320 aa17.97■□□□□ 0.47
ITGB1-215ENST00000488494 ZNF564Q8TBZ8 553 aaPredicted RBP17.97■□□□□ 0.47
ITGB1-215ENST00000488494 FEM1CQ96JP0 617 aa17.97■□□□□ 0.47
ITGB1-215ENST00000488494 CSPG4P5Q96PW8 444 aa17.97■□□□□ 0.47
ITGB1-215ENST00000488494 SLC17A9Q9BYT1 436 aa17.97■□□□□ 0.47
ITGB1-215ENST00000488494 COL5A1P20908 1838 aaPredicted RBP17.97■□□□□ 0.47
ITGB1-215ENST00000488494 IGF2RP11717 2491 aa17.96■□□□□ 0.47
ITGB1-215ENST00000488494 DOCK9Q9BZ29 2069 aa17.96■□□□□ 0.47
ITGB1-215ENST00000488494 IGLON5A6NGN9 336 aa17.96■□□□□ 0.47
ITGB1-215ENST00000488494 C1QTNF9BB2RNN3 333 aa17.96■□□□□ 0.47
ITGB1-215ENST00000488494 TNFSF14O43557 240 aa17.96■□□□□ 0.47
ITGB1-215ENST00000488494 PALMO75781 387 aa17.96■□□□□ 0.47
ITGB1-215ENST00000488494 C1QTNF9P0C862 333 aa17.96■□□□□ 0.47
ITGB1-215ENST00000488494 RARAP10276 462 aa17.96■□□□□ 0.47
ITGB1-215ENST00000488494 SSR1P43307 286 aaKnown RBP17.96■□□□□ 0.47
ITGB1-215ENST00000488494 RGRP47804 291 aa17.96■□□□□ 0.47
ITGB1-215ENST00000488494 ST3GAL2Q16842 350 aa17.96■□□□□ 0.47
ITGB1-215ENST00000488494 BOLA3Q53S33 107 aa17.96■□□□□ 0.47
ITGB1-215ENST00000488494 TMCO3Q6UWJ1 677 aa17.96■□□□□ 0.47
ITGB1-215ENST00000488494 KYAT3Q6YP21 454 aaKnown RBP17.96■□□□□ 0.47
ITGB1-215ENST00000488494 POLNQ7Z5Q5 900 aa17.96■□□□□ 0.47
ITGB1-215ENST00000488494 ZSCAN30Q86W11 494 aa17.96■□□□□ 0.47
ITGB1-215ENST00000488494 TP53INP2Q8IXH6 220 aa17.96■□□□□ 0.47
ITGB1-215ENST00000488494 OR8K1Q8NGG5 319 aa17.96■□□□□ 0.47
ITGB1-215ENST00000488494 TEKT4Q8WW24 435 aa17.96■□□□□ 0.47
ITGB1-215ENST00000488494 ADAMTS14Q8WXS8 1223 aa17.96■□□□□ 0.47
ITGB1-215ENST00000488494 CINPQ9BW66 212 aaPredicted RBP17.96■□□□□ 0.47
ITGB1-215ENST00000488494 PACSIN1Q9BY11 444 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms