RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 AREL1O15033 823 aa15.6■□□□□ 0.09
MCF2L-228ENST00000487354 SUV39H1O43463 412 aa15.6■□□□□ 0.09
MCF2L-228ENST00000487354 TSPAN6O43657 245 aa15.6■□□□□ 0.09
MCF2L-228ENST00000487354 ITGB2P05107 769 aa15.6■□□□□ 0.09
MCF2L-228ENST00000487354 FAM87AP0C7U9 286 aa15.6■□□□□ 0.09
MCF2L-228ENST00000487354 RECQLP46063 649 aaPredicted RBP15.6■□□□□ 0.09
MCF2L-228ENST00000487354 TRIM65Q6PJ69 517 aa15.6■□□□□ 0.09
MCF2L-228ENST00000487354 LURAP1LQ8IV03 231 aa15.6■□□□□ 0.09
MCF2L-228ENST00000487354 OR6K2Q8NGY2 324 aa15.6■□□□□ 0.09
MCF2L-228ENST00000487354 BTN2A2Q8WVV5 523 aa15.6■□□□□ 0.09
MCF2L-228ENST00000487354 SHC3Q92529 594 aa15.6■□□□□ 0.09
MCF2L-228ENST00000487354 CCDC74AQ96AQ1 378 aa15.6■□□□□ 0.09
MCF2L-228ENST00000487354 SGF29Q96ES7 293 aa15.6■□□□□ 0.09
MCF2L-228ENST00000487354 C1orf74Q96LT6 269 aa15.6■□□□□ 0.09
MCF2L-228ENST00000487354 TBCBQ99426 244 aa15.6■□□□□ 0.09
MCF2L-228ENST00000487354 FOXP3Q9BZS1 431 aa15.6■□□□□ 0.09
MCF2L-228ENST00000487354 FAM117AQ9C073 453 aa15.6■□□□□ 0.09
MCF2L-228ENST00000487354 ZDHHC6Q9H6R6 413 aa15.6■□□□□ 0.09
MCF2L-228ENST00000487354 WDCPQ9H6R7 721 aa15.6■□□□□ 0.09
MCF2L-228ENST00000487354 MBNL1Q9NR56 388 aaKnown RBP15.6■□□□□ 0.09
MCF2L-228ENST00000487354 IPO11Q9UI26 975 aaKnown RBP15.6■□□□□ 0.09
MCF2L-228ENST00000487354 ARHGEF17Q96PE2 2063 aaPredicted RBP15.59■□□□□ 0.09
MCF2L-228ENST00000487354 ZFC3H1O60293 1989 aaKnown RBP15.59■□□□□ 0.09
MCF2L-228ENST00000487354 SMC2O95347 1197 aa15.59■□□□□ 0.09
MCF2L-228ENST00000487354 OR1E1P30953 314 aa15.59■□□□□ 0.09
MCF2L-228ENST00000487354 RPIAP49247 311 aa15.59■□□□□ 0.09
MCF2L-228ENST00000487354 SULT1E1P49888 294 aa15.59■□□□□ 0.09
MCF2L-228ENST00000487354 LRRC73Q5JTD7 316 aa15.59■□□□□ 0.09
MCF2L-228ENST00000487354 KCTD16Q68DU8 428 aa15.59■□□□□ 0.09
MCF2L-228ENST00000487354 KLHL10Q6JEL2 608 aa15.59■□□□□ 0.09
MCF2L-228ENST00000487354 ZNF783Q6ZMS7 281 aa15.59■□□□□ 0.09
MCF2L-228ENST00000487354 MACC1Q6ZN28 852 aa15.59■□□□□ 0.09
MCF2L-228ENST00000487354 RAB11FIP2Q7L804 512 aa15.59■□□□□ 0.09
MCF2L-228ENST00000487354 FBXO39Q8N4B4 442 aa15.59■□□□□ 0.09
MCF2L-228ENST00000487354 ARL10Q8N8L6 244 aa15.59■□□□□ 0.09
MCF2L-228ENST00000487354 TP53I13Q8NBR0 393 aaPredicted RBP15.59■□□□□ 0.09
MCF2L-228ENST00000487354 PCDH19Q8TAB3 1148 aa15.59■□□□□ 0.09
MCF2L-228ENST00000487354 NELFBQ8WX92 580 aa15.59■□□□□ 0.09
MCF2L-228ENST00000487354 HTR3CQ8WXA8 447 aa15.59■□□□□ 0.09
MCF2L-228ENST00000487354 CRACR2AQ9BSW2 395 aa15.59■□□□□ 0.09
MCF2L-228ENST00000487354 SPON2Q9BUD6 331 aa15.59■□□□□ 0.09
MCF2L-228ENST00000487354 TM6SF2Q9BZW4 377 aa15.59■□□□□ 0.09
MCF2L-228ENST00000487354 SYNDIG1Q9H7V2 258 aa15.59■□□□□ 0.09
MCF2L-228ENST00000487354 EPB41L5Q9HCM4 733 aa15.59■□□□□ 0.09
MCF2L-228ENST00000487354 ATP13A1Q9HD20 1204 aa15.59■□□□□ 0.09
MCF2L-228ENST00000487354 NDFIP2Q9NV92 336 aa15.59■□□□□ 0.09
MCF2L-228ENST00000487354 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.59■□□□□ 0.09
MCF2L-228ENST00000487354 HECAQ9UBI9 543 aaPredicted RBP15.59■□□□□ 0.09
MCF2L-228ENST00000487354 NEU3Q9UQ49 428 aa15.59■□□□□ 0.09
MCF2L-228ENST00000487354 CTNND2Q9UQB3 1225 aa15.59■□□□□ 0.09
MCF2L-228ENST00000487354 HEMK1Q9Y5R4 338 aaPredicted RBP15.59■□□□□ 0.09
MCF2L-228ENST00000487354 ANXA6P08133 673 aa15.58■□□□□ 0.08
MCF2L-228ENST00000487354 SLC9A1P19634 815 aa15.58■□□□□ 0.08
MCF2L-228ENST00000487354 CCKBRP32239 447 aa15.58■□□□□ 0.08
MCF2L-228ENST00000487354 ACVRL1P37023 503 aa15.58■□□□□ 0.08
MCF2L-228ENST00000487354 CCL7P80098 99 aa15.58■□□□□ 0.08
MCF2L-228ENST00000487354 GNA12Q03113 381 aa15.58■□□□□ 0.08
MCF2L-228ENST00000487354 SGCGQ13326 291 aa15.58■□□□□ 0.08
MCF2L-228ENST00000487354 EIF3IQ13347 325 aaKnown RBP15.58■□□□□ 0.08
MCF2L-228ENST00000487354 ARHGAP44Q17R89 818 aa15.58■□□□□ 0.08
MCF2L-228ENST00000487354 ZNF805Q5CZA5 627 aa15.58■□□□□ 0.08
MCF2L-228ENST00000487354 RETSATQ6NUM9 610 aa15.58■□□□□ 0.08
MCF2L-228ENST00000487354 ENOSF1Q7L5Y1 443 aa15.58■□□□□ 0.08
MCF2L-228ENST00000487354 VPS36Q86VN1 386 aa15.58■□□□□ 0.08
MCF2L-228ENST00000487354 PLPP6Q8IY26 295 aa15.58■□□□□ 0.08
MCF2L-228ENST00000487354 SDR16C5Q8N3Y7 309 aa15.58■□□□□ 0.08
MCF2L-228ENST00000487354 RAB7BQ96AH8 199 aa15.58■□□□□ 0.08
MCF2L-228ENST00000487354 CCDC34Q96HJ3 373 aa15.58■□□□□ 0.08
MCF2L-228ENST00000487354 PLCB1Q9NQ66 1216 aa15.58■□□□□ 0.08
MCF2L-228ENST00000487354 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.58■□□□□ 0.08
MCF2L-228ENST00000487354 PCDHGA4Q9Y5G9 962 aa15.58■□□□□ 0.08
MCF2L-228ENST00000487354 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.58■□□□□ 0.08
MCF2L-228ENST00000487354 RPLP0P05388 317 aaKnown RBP15.57■□□□□ 0.08
MCF2L-228ENST00000487354 PNMA6AP0CW24 399 aaPredicted RBP15.57■□□□□ 0.08
MCF2L-228ENST00000487354 LIPCP11150 499 aa15.57■□□□□ 0.08
MCF2L-228ENST00000487354 ITIH2P19823 946 aa15.57■□□□□ 0.08
MCF2L-228ENST00000487354 FLT3P36888 993 aa15.57■□□□□ 0.08
MCF2L-228ENST00000487354 ETV5P41161 510 aa15.57■□□□□ 0.08
MCF2L-228ENST00000487354 DNA2P51530 1060 aa15.57■□□□□ 0.08
MCF2L-228ENST00000487354 THOP1P52888 689 aa15.57■□□□□ 0.08
MCF2L-228ENST00000487354 YPEL5P62699 121 aa15.57■□□□□ 0.08
MCF2L-228ENST00000487354 SLC20A2Q08357 652 aa15.57■□□□□ 0.08
MCF2L-228ENST00000487354 STIM1Q13586 685 aa15.57■□□□□ 0.08
MCF2L-228ENST00000487354 RAB6CQ53S08 254 aa15.57■□□□□ 0.08
MCF2L-228ENST00000487354 XKR5Q6UX68 686 aa15.57■□□□□ 0.08
MCF2L-228ENST00000487354 ATG14Q6ZNE5 492 aa15.57■□□□□ 0.08
MCF2L-228ENST00000487354 USP53Q70EK8 1073 aa15.57■□□□□ 0.08
MCF2L-228ENST00000487354 VASH2Q86V25 355 aa15.57■□□□□ 0.08
MCF2L-228ENST00000487354 ARHGEF2Q92974 986 aaKnown RBP15.57■□□□□ 0.08
MCF2L-228ENST00000487354 GLMNQ92990 594 aa15.57■□□□□ 0.08
MCF2L-228ENST00000487354 ISG20Q96AZ6 181 aaKnown RBP15.57■□□□□ 0.08
MCF2L-228ENST00000487354 SEMA3CQ99985 751 aa15.57■□□□□ 0.08
MCF2L-228ENST00000487354 FUCA2Q9BTY2 467 aa15.57■□□□□ 0.08
MCF2L-228ENST00000487354 SLC13A1Q9BZW2 595 aa15.57■□□□□ 0.08
MCF2L-228ENST00000487354 RAB6CQ9H0N0 254 aa15.57■□□□□ 0.08
MCF2L-228ENST00000487354 SIX2Q9NPC8 291 aa15.57■□□□□ 0.08
MCF2L-228ENST00000487354 RRN3Q9NYV6 651 aa15.57■□□□□ 0.08
MCF2L-228ENST00000487354 FOXJ2Q9P0K8 574 aa15.57■□□□□ 0.08
MCF2L-228ENST00000487354 SIRPGQ9P1W8 387 aa15.57■□□□□ 0.08
MCF2L-228ENST00000487354 TEX15Q9BXT5 2789 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms