RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 MAPK10P53779 464 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 GSDMDP57764 484 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 HPCAP84074 193 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 SP2Q02086 613 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 RELAQ04206 551 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 CDC20Q12834 499 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 ZNF268Q14587 947 aaPredicted RBP5.61□□□□□ -1.51
COPS3-209ENST00000486810 TXNRD1Q16881 649 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 KCNT1Q5JUK3 1230 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 CCNJQ5T5M9 372 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 SHEQ5VZ18 495 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 ANO7Q6IWH7 933 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 TMEM108Q6UXF1 575 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 MFSD6Q6ZSS7 791 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 ITIH5Q86UX2 942 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 PALB2Q86YC2 1186 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 CLVS1Q8IUQ0 354 aaPredicted RBP5.61□□□□□ -1.51
COPS3-209ENST00000486810 MAP7D3Q8IWC1 876 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 NATD1Q8N6N6 113 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 ANKRD42Q8N9B4 389 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 CNBD1Q8NA66 436 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 PJA1Q8NG27 643 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 MGARPQ8TDB4 240 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 ATP8B4Q8TF62 1192 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 NOC3LQ8WTT2 800 aaKnown RBP5.61□□□□□ -1.51
COPS3-209ENST00000486810 KBTBD7Q8WVZ9 684 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 TFAP2BQ92481 460 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 RMDN1Q96DB5 314 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 STAMBPL1Q96FJ0 436 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 TTC25Q96NG3 672 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 SH3GL2Q99962 352 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 FUCA2Q9BTY2 467 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 C9orf16Q9BUW7 83 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 KATNAL1Q9BW62 490 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 MRPL1Q9BYD6 325 aaKnown RBP5.61□□□□□ -1.51
COPS3-209ENST00000486810 NEK6Q9HC98 313 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 POLE3Q9NRF9 147 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 DDX18Q9NVP1 670 aaKnown RBP5.61□□□□□ -1.51
COPS3-209ENST00000486810 STK32BQ9NY57 414 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.61□□□□□ -1.51
COPS3-209ENST00000486810 IL37Q9NZH6 218 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 FNIP2Q9P278 1114 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 C11orf21Q9P2W6 132 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 KCNN3Q9UGI6 736 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 TEKT2Q9UIF3 430 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 CHMP2BQ9UQN3 213 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 DMTF1Q9Y222 760 aa5.61□□□□□ -1.51
COPS3-209ENST00000486810 CHTOPQ9Y3Y2 248 aaKnown RBP5.61□□□□□ -1.51
COPS3-209ENST00000486810 SHROOM2Q13796 1616 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 ATP10AO60312 1499 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 CPSF1Q10570 1443 aaKnown RBP5.6□□□□□ -1.51
COPS3-209ENST00000486810 PDS5AQ29RF7 1337 aaKnown RBP5.6□□□□□ -1.51
COPS3-209ENST00000486810 ITIH6Q6UXX5 1313 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 C1orf232A0A0U1RR37 186 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 A0A1B0GWJ7 208 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 A0A1W2PPL8 197 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 CFAP73A6NFT4 308 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 H0Y626 953 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 CACNB4O00305 520 aaPredicted RBP5.6□□□□□ -1.51
COPS3-209ENST00000486810 TPP1O14773 563 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 SLC7A4O43246 635 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 NDUFA2O43678 99 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 CLN5O75503 358 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 PALMO75781 387 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 SOAT2O75908 522 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 GUCA1CO95843 209 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 CHRM2P08172 466 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 GSTA1P08263 222 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 PDHA1P08559 390 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 IFIT2P09913 472 aaKnown RBP5.6□□□□□ -1.51
COPS3-209ENST00000486810 EEF2P13639 858 aaKnown RBP5.6□□□□□ -1.51
COPS3-209ENST00000486810 MX1P20591 662 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 ITGALP20701 1170 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 TNFAIP3P21580 790 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 BMP5P22003 454 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 SP100P23497 879 aaPredicted RBP5.6□□□□□ -1.51
COPS3-209ENST00000486810 DNAJB1P25685 340 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 CXCR5P32302 372 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 KRT20P35900 424 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 ATP6V1E1P36543 226 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 RXRGP48443 463 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 RARRES1P49788 294 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 RGS7P49802 495 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 LILRA4P59901 499 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 ELF3P78545 371 aaPredicted RBP5.6□□□□□ -1.51
COPS3-209ENST00000486810 GOLGA8FQ08AF8 430 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 GOLGA8DPQ0D2H9 430 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 CTBP1Q13363 440 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 PTPRRQ15256 657 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 GFOD2Q3B7J2 385 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 C12orf60Q5U649 245 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 METTL21CQ5VZV1 264 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 SNRNP48Q6IEG0 339 aaKnown RBP5.6□□□□□ -1.51
COPS3-209ENST00000486810 OLFM4Q6UX06 510 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 PEG10Q86TG7 708 aaKnown RBP5.6□□□□□ -1.51
COPS3-209ENST00000486810 AKAP14Q86UN6 197 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 PLA2G4DQ86XP0 818 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 DGKHQ86XP1 1220 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 ZNF677Q86XU0 584 aa5.6□□□□□ -1.51
COPS3-209ENST00000486810 LRRC8AQ8IWT6 810 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms