RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 RUVBL2Q9Y230 463 aaKnown RBP10.76□□□□□ -0.69
CCDC171-208ENST00000486641 FIS1Q9Y3D6 152 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 DGKBQ9Y6T7 804 aa10.76□□□□□ -0.69
CCDC171-208ENST00000486641 EI24O14681 340 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 MRASO14807 208 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 DLX3O60479 287 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 RSL1D1O76021 490 aaKnown RBP10.75□□□□□ -0.69
CCDC171-208ENST00000486641 RASAL1O95294 804 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 SNRPB2P08579 225 aaKnown RBP10.75□□□□□ -0.69
CCDC171-208ENST00000486641 KRT19P08727 400 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 HSPA8P11142 646 aaKnown RBP10.75□□□□□ -0.69
CCDC171-208ENST00000486641 MBL2P11226 248 aaPredicted RBP10.75□□□□□ -0.69
CCDC171-208ENST00000486641 TGM1P22735 817 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 NR4A1P22736 598 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 CCT8P50990 548 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 SPCS2Q15005 226 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 ARL13BQ3SXY8 428 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 TIGD2Q4W5G0 525 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 C8orf82Q6P1X6 216 aaPredicted RBP10.75□□□□□ -0.69
CCDC171-208ENST00000486641 GADL1Q6ZQY3 521 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 SPRED1Q7Z699 444 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 HOMEZQ8IX15 550 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 CCNYL1Q8N7R7 359 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 RDH11Q8TC12 318 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 USP33Q8TEY7 942 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 RAB2BQ8WUD1 216 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 ZNF669Q96BR6 464 aaPredicted RBP10.75□□□□□ -0.69
CCDC171-208ENST00000486641 DNAI2Q9GZS0 605 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 PXMP2Q9NR77 195 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 GGA3Q9NZ52 723 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 DTLQ9NZJ0 730 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 MID2Q9UJV3 735 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 SLC39A10Q9ULF5 831 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 AP4E1Q9UPM8 1137 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 DOCK5Q9H7D0 1870 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 DHRS12A0PJE2 317 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 TRPC5OSA6NMA1 111 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 SYNCRIPO60506 623 aaKnown RBP10.75□□□□□ -0.69
CCDC171-208ENST00000486641 SRP72O76094 671 aaKnown RBP10.75□□□□□ -0.69
CCDC171-208ENST00000486641 DDHD2O94830 711 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 APOA4P06727 396 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 JUNBP17275 347 aaPredicted RBP10.75□□□□□ -0.69
CCDC171-208ENST00000486641 PTPN2P17706 415 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 EEF1B2P24534 225 aaKnown RBP10.75□□□□□ -0.69
CCDC171-208ENST00000486641 FASP25445 335 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 PSMB4P28070 264 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 ELK4P28324 431 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 EEF1DP29692 281 aaKnown RBP10.75□□□□□ -0.69
CCDC171-208ENST00000486641 ARL2P36404 184 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 NR2C2P49116 596 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 NEK2P51955 445 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 IGBP1P78318 339 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 DMPKQ09013 629 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 GRM1Q13255 1194 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 PPP1R3AQ16821 1122 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 HSDL1Q3SXM5 330 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 CCNYL2Q5T2Q4 361 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 ARHGEF16Q5VV41 709 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 GTF2IRD2BQ6EKJ0 949 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 XAF1Q6GPH4 301 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 ZNF773Q6PK81 442 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 GTF2IRD2Q86UP8 949 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 FSTL5Q8N475 847 aaPredicted RBP10.75□□□□□ -0.69
CCDC171-208ENST00000486641 ZUFSPQ96AP4 578 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 LRCH3Q96II8 777 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 YTHDF1Q9BYJ9 559 aaKnown RBP10.75□□□□□ -0.69
CCDC171-208ENST00000486641 KLQ9UEF7 1012 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 TRPC5Q9UL62 973 aaPredicted RBP10.75□□□□□ -0.69
CCDC171-208ENST00000486641 RAD54BQ9Y620 910 aa10.75□□□□□ -0.69
CCDC171-208ENST00000486641 MDM4O15151 490 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 PHGDHO43175 533 aaKnown RBP10.74□□□□□ -0.69
CCDC171-208ENST00000486641 NRP2O60462 931 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 SNAP29O95721 258 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 EIF2S1P05198 315 aaKnown RBP10.74□□□□□ -0.69
CCDC171-208ENST00000486641 HOXC6P09630 235 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 IL10P22301 178 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 LRPAP1P30533 357 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 AVPR1AP37288 418 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 ATXN1P54253 815 aaKnown RBP10.74□□□□□ -0.69
CCDC171-208ENST00000486641 PRKAA2P54646 552 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 TPTEP56180 551 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 GHRHRQ02643 423 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 EN1Q05925 392 aaPredicted RBP10.74□□□□□ -0.69
CCDC171-208ENST00000486641 AQP6Q13520 282 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 MAPRE2Q15555 327 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 SMUG1Q53HV7 270 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 FAM45BPQ6NSW5 357 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 CNSTQ6PJW8 725 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 FAM196AQ6ZSG2 479 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 VASH1Q7L8A9 365 aaPredicted RBP10.74□□□□□ -0.69
CCDC171-208ENST00000486641 ANKRD13BQ86YJ7 626 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 RAVER1Q8IY67 606 aaKnown RBP10.74□□□□□ -0.69
CCDC171-208ENST00000486641 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.74□□□□□ -0.69
CCDC171-208ENST00000486641 OR52K1Q8NGK4 314 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 FAM45AQ8TCE6 357 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 MAGEE2Q8TD90 523 aaPredicted RBP10.74□□□□□ -0.69
CCDC171-208ENST00000486641 STYXQ8WUJ0 223 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 KCTD4Q8WVF5 259 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 OTUD5Q96G74 571 aa10.74□□□□□ -0.69
CCDC171-208ENST00000486641 CENPNQ96H22 339 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms