RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 OR2AP1Q8NGE2 309 aa13.5□□□□□ -0.25
PTPN7-212ENST00000480836 IFI44Q8TCB0 444 aa13.5□□□□□ -0.25
PTPN7-212ENST00000480836 ISG20Q96AZ6 181 aaKnown RBP13.5□□□□□ -0.25
PTPN7-212ENST00000480836 NSMCE3Q96MG7 304 aa13.5□□□□□ -0.25
PTPN7-212ENST00000480836 SIK3Q9Y2K2 1263 aa13.5□□□□□ -0.25
PTPN7-212ENST00000480836 RP1P56715 2156 aa13.49□□□□□ -0.25
PTPN7-212ENST00000480836 CPED1A4D0V7 1026 aa13.49□□□□□ -0.25
PTPN7-212ENST00000480836 PES1O00541 588 aaKnown RBP13.49□□□□□ -0.25
PTPN7-212ENST00000480836 RRP8O43159 456 aaKnown RBP13.49□□□□□ -0.25
PTPN7-212ENST00000480836 KDELR3O43731 214 aa13.49□□□□□ -0.25
PTPN7-212ENST00000480836 KRT10P13645 584 aa13.49□□□□□ -0.25
PTPN7-212ENST00000480836 JUNDP17535 347 aa13.49□□□□□ -0.25
PTPN7-212ENST00000480836 ACTN2P35609 894 aa13.49□□□□□ -0.25
PTPN7-212ENST00000480836 PTPN9P43378 593 aa13.49□□□□□ -0.25
PTPN7-212ENST00000480836 LSSP48449 732 aa13.49□□□□□ -0.25
PTPN7-212ENST00000480836 PDX1P52945 283 aa13.49□□□□□ -0.25
PTPN7-212ENST00000480836 HNRNPKP61978 463 aaKnown RBP eCLIP13.49□□□□□ -0.25
PTPN7-212ENST00000480836 CXADRP78310 365 aa13.49□□□□□ -0.25
PTPN7-212ENST00000480836 GABREP78334 506 aa13.49□□□□□ -0.25
PTPN7-212ENST00000480836 OGDHQ02218 1023 aa13.49□□□□□ -0.25
PTPN7-212ENST00000480836 KRT31Q15323 416 aa13.49□□□□□ -0.25
PTPN7-212ENST00000480836 ISXQ2M1V0 245 aa13.49□□□□□ -0.25
PTPN7-212ENST00000480836 CDKAL1Q5VV42 579 aa13.49□□□□□ -0.25
PTPN7-212ENST00000480836 LRRC69Q6ZNQ3 347 aa13.49□□□□□ -0.25
PTPN7-212ENST00000480836 EFL1Q7Z2Z2 1120 aaKnown RBP13.49□□□□□ -0.25
PTPN7-212ENST00000480836 VPS36Q86VN1 386 aa13.49□□□□□ -0.25
PTPN7-212ENST00000480836 FAM114A1Q8IWE2 563 aa13.49□□□□□ -0.25
PTPN7-212ENST00000480836 SFTPA2Q8IWL1 248 aa13.49□□□□□ -0.25
PTPN7-212ENST00000480836 ZNF843Q8N446 348 aa13.49□□□□□ -0.25
PTPN7-212ENST00000480836 LMX1AQ8TE12 382 aa13.49□□□□□ -0.25
PTPN7-212ENST00000480836 FAM172AQ8WUF8 416 aa13.49□□□□□ -0.25
PTPN7-212ENST00000480836 ATXN7L3BQ96GX2 97 aa13.49□□□□□ -0.25
PTPN7-212ENST00000480836 PPP1R16AQ96I34 528 aa13.49□□□□□ -0.25
PTPN7-212ENST00000480836 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.49□□□□□ -0.25
PTPN7-212ENST00000480836 SEMA4CQ9C0C4 833 aa13.49□□□□□ -0.25
PTPN7-212ENST00000480836 FAM207AQ9NSI2 230 aaPredicted RBP13.49□□□□□ -0.25
PTPN7-212ENST00000480836 RABGEF1Q9UJ41 708 aa13.49□□□□□ -0.25
PTPN7-212ENST00000480836 SSUH2Q9Y2M2 353 aa13.49□□□□□ -0.25
PTPN7-212ENST00000480836 COQ6Q9Y2Z9 468 aa13.49□□□□□ -0.25
PTPN7-212ENST00000480836 ENTPD2Q9Y5L3 495 aa13.49□□□□□ -0.25
PTPN7-212ENST00000480836 GCN1Q92616 2671 aaKnown RBP13.48□□□□□ -0.25
PTPN7-212ENST00000480836 EME2A4GXA9 379 aaPredicted RBP13.48□□□□□ -0.25
PTPN7-212ENST00000480836 FPGTO14772 594 aa13.48□□□□□ -0.25
PTPN7-212ENST00000480836 AQP9O43315 295 aa13.48□□□□□ -0.25
PTPN7-212ENST00000480836 TSPAN6O43657 245 aa13.48□□□□□ -0.25
PTPN7-212ENST00000480836 DXOO77932 396 aaKnown RBP13.48□□□□□ -0.25
PTPN7-212ENST00000480836 POP4O95707 220 aaKnown RBP13.48□□□□□ -0.25
PTPN7-212ENST00000480836 GSRP00390 522 aa13.48□□□□□ -0.25
PTPN7-212ENST00000480836 SOX5P35711 763 aa13.48□□□□□ -0.25
PTPN7-212ENST00000480836 RABIFP47224 123 aa13.48□□□□□ -0.25
PTPN7-212ENST00000480836 ADKP55263 362 aaKnown RBP13.48□□□□□ -0.25
PTPN7-212ENST00000480836 RPL7AP62424 266 aaKnown RBP13.48□□□□□ -0.25
PTPN7-212ENST00000480836 CCDC15Q0P6D6 951 aa13.48□□□□□ -0.25
PTPN7-212ENST00000480836 TCEA2Q15560 299 aa13.48□□□□□ -0.25
PTPN7-212ENST00000480836 GPR155Q7Z3F1 870 aa13.48□□□□□ -0.25
PTPN7-212ENST00000480836 TTC7BQ86TV6 843 aa13.48□□□□□ -0.25
PTPN7-212ENST00000480836 PARGQ86W56 976 aa13.48□□□□□ -0.25
PTPN7-212ENST00000480836 ZSWIM9Q86XI8 627 aa13.48□□□□□ -0.25
PTPN7-212ENST00000480836 DNAAF5Q86Y56 855 aa13.48□□□□□ -0.25
PTPN7-212ENST00000480836 DCP2Q8IU60 420 aaKnown RBP13.48□□□□□ -0.25
PTPN7-212ENST00000480836 SLC35F3Q8IY50 421 aa13.48□□□□□ -0.25
PTPN7-212ENST00000480836 TP53I13Q8NBR0 393 aaPredicted RBP13.48□□□□□ -0.25
PTPN7-212ENST00000480836 ASB12Q8WXK4 309 aa13.48□□□□□ -0.25
PTPN7-212ENST00000480836 EXOC2Q96KP1 924 aa13.48□□□□□ -0.25
PTPN7-212ENST00000480836 WRAP53Q9BUR4 548 aaKnown RBP13.48□□□□□ -0.25
PTPN7-212ENST00000480836 LRRC61Q9BV99 259 aa13.48□□□□□ -0.25
PTPN7-212ENST00000480836 BOCQ9BWV1 1114 aa13.48□□□□□ -0.25
PTPN7-212ENST00000480836 MAGEH1Q9H213 219 aa13.48□□□□□ -0.25
PTPN7-212ENST00000480836 FANCLQ9NW38 375 aa13.48□□□□□ -0.25
PTPN7-212ENST00000480836 LHX3Q9UBR4 397 aa13.48□□□□□ -0.25
PTPN7-212ENST00000480836 SATB2Q9UPW6 733 aa13.48□□□□□ -0.25
PTPN7-212ENST00000480836 PAXBP1Q9Y5B6 917 aa13.48□□□□□ -0.25
PTPN7-212ENST00000480836 CSNK1G3Q9Y6M4 447 aa13.48□□□□□ -0.25
PTPN7-212ENST00000480836 LRRK1Q38SD2 2015 aa13.47□□□□□ -0.25
PTPN7-212ENST00000480836 MGAQ8IWI9 3026 aa13.47□□□□□ -0.25
PTPN7-212ENST00000480836 NEMP2A6NFY4 417 aa13.47□□□□□ -0.25
PTPN7-212ENST00000480836 YY2O15391 372 aa13.47□□□□□ -0.25
PTPN7-212ENST00000480836 BUB1O43683 1085 aa13.47□□□□□ -0.25
PTPN7-212ENST00000480836 LZTS3O60299 673 aaPredicted RBP13.47□□□□□ -0.25
PTPN7-212ENST00000480836 BUB1BO60566 1050 aaPredicted RBP13.47□□□□□ -0.25
PTPN7-212ENST00000480836 TMCC1O94876 653 aa13.47□□□□□ -0.25
PTPN7-212ENST00000480836 PRKCGP05129 697 aa13.47□□□□□ -0.25
PTPN7-212ENST00000480836 GP1BAP07359 652 aa13.47□□□□□ -0.25
PTPN7-212ENST00000480836 TSHRP16473 764 aa13.47□□□□□ -0.25
PTPN7-212ENST00000480836 SDC4P31431 198 aa13.47□□□□□ -0.25
PTPN7-212ENST00000480836 RGRP47804 291 aa13.47□□□□□ -0.25
PTPN7-212ENST00000480836 MAPKAPK2P49137 400 aa13.47□□□□□ -0.25
PTPN7-212ENST00000480836 SKOR1P84550 965 aa13.47□□□□□ -0.25
PTPN7-212ENST00000480836 SGCGQ13326 291 aa13.47□□□□□ -0.25
PTPN7-212ENST00000480836 POLD3Q15054 466 aaPredicted RBP13.47□□□□□ -0.25
PTPN7-212ENST00000480836 PRRT3Q5FWE3 981 aa13.47□□□□□ -0.25
PTPN7-212ENST00000480836 PPP1R15BQ5SWA1 713 aa13.47□□□□□ -0.25
PTPN7-212ENST00000480836 ZCCHC8Q6NZY4 707 aaKnown RBP13.47□□□□□ -0.25
PTPN7-212ENST00000480836 GDPD4Q6W3E5 623 aa13.47□□□□□ -0.25
PTPN7-212ENST00000480836 STRADAQ7RTN6 431 aa13.47□□□□□ -0.25
PTPN7-212ENST00000480836 APTXQ7Z2E3 356 aaKnown RBP13.47□□□□□ -0.25
PTPN7-212ENST00000480836 ARFGAP1Q8N6T3 406 aa13.47□□□□□ -0.25
PTPN7-212ENST00000480836 ENOX1Q8TC92 643 aaKnown RBP13.47□□□□□ -0.25
PTPN7-212ENST00000480836 MAPK15Q8TD08 544 aa13.47□□□□□ -0.25
PTPN7-212ENST00000480836 TBC1D31Q96DN5 1066 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms