RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 CIR1Q86X95 450 aaPredicted RBP12.09□□□□□ -0.47
USP11-208ENST00000480104 LGI2Q8N0V4 545 aa12.09□□□□□ -0.47
USP11-208ENST00000480104 SH2D3CQ8N5H7 860 aa12.09□□□□□ -0.47
USP11-208ENST00000480104 BMPERQ8N8U9 685 aa12.09□□□□□ -0.47
USP11-208ENST00000480104 OR2A12Q8NGT7 310 aa12.09□□□□□ -0.47
USP11-208ENST00000480104 PLEKHO2Q8TD55 490 aa12.09□□□□□ -0.47
USP11-208ENST00000480104 AZIN2Q96A70 460 aa12.09□□□□□ -0.47
USP11-208ENST00000480104 MDFIQ99750 246 aa12.09□□□□□ -0.47
USP11-208ENST00000480104 FARP1Q9Y4F1 1045 aaPredicted RBP12.09□□□□□ -0.47
USP11-208ENST00000480104 TULP2O00295 520 aa12.08□□□□□ -0.48
USP11-208ENST00000480104 SPTLC2O15270 562 aa12.08□□□□□ -0.48
USP11-208ENST00000480104 RASGRP1O95267 797 aa12.08□□□□□ -0.48
USP11-208ENST00000480104 MOCS2O96007 188 aaPredicted RBP12.08□□□□□ -0.48
USP11-208ENST00000480104 CD1EP15812 388 aa12.08□□□□□ -0.48
USP11-208ENST00000480104 ALDH4A1P30038 563 aa12.08□□□□□ -0.48
USP11-208ENST00000480104 KRTAP10-9P60411 292 aa12.08□□□□□ -0.48
USP11-208ENST00000480104 YPEL5P62699 121 aa12.08□□□□□ -0.48
USP11-208ENST00000480104 SEMA5AQ13591 1074 aa12.08□□□□□ -0.48
USP11-208ENST00000480104 ARSIQ5FYB1 569 aa12.08□□□□□ -0.48
USP11-208ENST00000480104 ARL6IP4Q66PJ3 421 aaKnown RBP12.08□□□□□ -0.48
USP11-208ENST00000480104 OGFOD3Q6PK18 319 aa12.08□□□□□ -0.48
USP11-208ENST00000480104 VPS36Q86VN1 386 aa12.08□□□□□ -0.48
USP11-208ENST00000480104 CENPTQ96BT3 561 aa12.08□□□□□ -0.48
USP11-208ENST00000480104 PPP1R16AQ96I34 528 aa12.08□□□□□ -0.48
USP11-208ENST00000480104 FCRL2Q96LA5 508 aaPredicted RBP12.08□□□□□ -0.48
USP11-208ENST00000480104 UBXN6Q9BZV1 441 aa12.08□□□□□ -0.48
USP11-208ENST00000480104 TRIT1Q9H3H1 467 aaKnown RBP12.08□□□□□ -0.48
USP11-208ENST00000480104 MLXIPLQ9NP71 852 aa12.08□□□□□ -0.48
USP11-208ENST00000480104 XPO7Q9UIA9 1087 aaKnown RBP12.08□□□□□ -0.48
USP11-208ENST00000480104 CROTQ9UKG9 612 aa12.08□□□□□ -0.48
USP11-208ENST00000480104 TMEM184BQ9Y519 407 aaPredicted RBP12.08□□□□□ -0.48
USP11-208ENST00000480104 PCDHGA9Q9Y5G4 932 aaKnown RBP12.08□□□□□ -0.48
USP11-208ENST00000480104 INPP4BO15327 924 aa12.07□□□□□ -0.48
USP11-208ENST00000480104 AP1G1O43747 822 aa12.07□□□□□ -0.48
USP11-208ENST00000480104 PRICKLE3O43900 615 aaPredicted RBP12.07□□□□□ -0.48
USP11-208ENST00000480104 DLGAP3O95886 979 aa12.07□□□□□ -0.48
USP11-208ENST00000480104 THRAP10827 490 aa12.07□□□□□ -0.48
USP11-208ENST00000480104 CD58P19256 250 aa12.07□□□□□ -0.48
USP11-208ENST00000480104 CD1CP29017 333 aa12.07□□□□□ -0.48
USP11-208ENST00000480104 GJB2P29033 226 aa12.07□□□□□ -0.48
USP11-208ENST00000480104 CSF2RBP32927 897 aa12.07□□□□□ -0.48
USP11-208ENST00000480104 HOXD13P35453 343 aa12.07□□□□□ -0.48
USP11-208ENST00000480104 DLSTP36957 453 aa12.07□□□□□ -0.48
USP11-208ENST00000480104 PLK1P53350 603 aa12.07□□□□□ -0.48
USP11-208ENST00000480104 CDK18Q07002 472 aa12.07□□□□□ -0.48
USP11-208ENST00000480104 ADIGQ0VDE8 80 aa12.07□□□□□ -0.48
USP11-208ENST00000480104 CHAF1BQ13112 559 aa12.07□□□□□ -0.48
USP11-208ENST00000480104 PAPD7Q5XG87 772 aaKnown RBP12.07□□□□□ -0.48
USP11-208ENST00000480104 KCTD16Q68DU8 428 aa12.07□□□□□ -0.48
USP11-208ENST00000480104 CXorf57Q6NSI4 855 aaKnown RBP12.07□□□□□ -0.48
USP11-208ENST00000480104 ZSCAN30Q86W11 494 aa12.07□□□□□ -0.48
USP11-208ENST00000480104 GLIS1Q8NBF1 620 aa12.07□□□□□ -0.48
USP11-208ENST00000480104 FAM46DQ8NEK8 389 aa12.07□□□□□ -0.48
USP11-208ENST00000480104 PNPLA2Q96AD5 504 aa12.07□□□□□ -0.48
USP11-208ENST00000480104 CCDC114Q96M63 670 aa12.07□□□□□ -0.48
USP11-208ENST00000480104 IPO9Q96P70 1041 aaKnown RBP12.07□□□□□ -0.48
USP11-208ENST00000480104 TWSG1Q9GZX9 223 aa12.07□□□□□ -0.48
USP11-208ENST00000480104 AGPAT3Q9NRZ7 376 aa12.07□□□□□ -0.48
USP11-208ENST00000480104 ABCC13Q9NSE7 274 aa12.07□□□□□ -0.48
USP11-208ENST00000480104 TMEM9Q9P0T7 183 aa12.07□□□□□ -0.48
USP11-208ENST00000480104 ITM2BQ9Y287 266 aa12.07□□□□□ -0.48
USP11-208ENST00000480104 FLNAP21333 2647 aaKnown RBP12.06□□□□□ -0.48
USP11-208ENST00000480104 ZSCAN5CA6NGD5 496 aaPredicted RBP12.06□□□□□ -0.48
USP11-208ENST00000480104 KATNA1O75449 491 aa12.06□□□□□ -0.48
USP11-208ENST00000480104 LEFTY1O75610 366 aa12.06□□□□□ -0.48
USP11-208ENST00000480104 MT-CO1P00395 513 aa12.06□□□□□ -0.48
USP11-208ENST00000480104 C8BP07358 591 aa12.06□□□□□ -0.48
USP11-208ENST00000480104 SRCP12931 536 aa12.06□□□□□ -0.48
USP11-208ENST00000480104 CD99P14209 185 aa12.06□□□□□ -0.48
USP11-208ENST00000480104 COX6B1P14854 86 aa12.06□□□□□ -0.48
USP11-208ENST00000480104 NFKBIAP25963 317 aa12.06□□□□□ -0.48
USP11-208ENST00000480104 ITGA1P56199 1179 aa12.06□□□□□ -0.48
USP11-208ENST00000480104 CENPCQ03188 943 aa12.06□□□□□ -0.48
USP11-208ENST00000480104 DPYDQ12882 1025 aa12.06□□□□□ -0.48
USP11-208ENST00000480104 CLPPQ16740 277 aaPredicted RBP12.06□□□□□ -0.48
USP11-208ENST00000480104 SGSM1Q2NKQ1 1148 aa12.06□□□□□ -0.48
USP11-208ENST00000480104 RAP1GAP2Q684P5 730 aa12.06□□□□□ -0.48
USP11-208ENST00000480104 PARS2Q7L3T8 475 aaKnown RBP12.06□□□□□ -0.48
USP11-208ENST00000480104 CHSY1Q86X52 802 aa12.06□□□□□ -0.48
USP11-208ENST00000480104 CCAR2Q8N163 923 aaKnown RBP12.06□□□□□ -0.48
USP11-208ENST00000480104 ESX1Q8N693 406 aa12.06□□□□□ -0.48
USP11-208ENST00000480104 OR4D9Q8NGE8 314 aa12.06□□□□□ -0.48
USP11-208ENST00000480104 ASB12Q8WXK4 309 aa12.06□□□□□ -0.48
USP11-208ENST00000480104 RNF31Q96EP0 1072 aa12.06□□□□□ -0.48
USP11-208ENST00000480104 ALG14Q96F25 216 aa12.06□□□□□ -0.48
USP11-208ENST00000480104 RBM15Q96T37 977 aaKnown RBP eCLIP12.06□□□□□ -0.48
USP11-208ENST00000480104 TMUB1Q9BVT8 246 aa12.06□□□□□ -0.48
USP11-208ENST00000480104 MBNL1Q9NR56 388 aaKnown RBP12.06□□□□□ -0.48
USP11-208ENST00000480104 COPG2Q9UBF2 871 aa12.06□□□□□ -0.48
USP11-208ENST00000480104 IL36AQ9UHA7 158 aa12.06□□□□□ -0.48
USP11-208ENST00000480104 ZNF451Q9Y4E5 1061 aa12.06□□□□□ -0.48
USP11-208ENST00000480104 FRMD3A2A2Y4 597 aa12.05□□□□□ -0.48
USP11-208ENST00000480104 LRRIQ3A6PVS8 624 aaPredicted RBP12.05□□□□□ -0.48
USP11-208ENST00000480104 K7ERQ8 282 aa12.05□□□□□ -0.48
USP11-208ENST00000480104 CLIC2O15247 247 aa12.05□□□□□ -0.48
USP11-208ENST00000480104 EIF3DO15371 548 aaKnown RBP eCLIP12.05□□□□□ -0.48
USP11-208ENST00000480104 DPM1O60762 260 aa12.05□□□□□ -0.48
USP11-208ENST00000480104 MAP3K6O95382 1288 aa12.05□□□□□ -0.48
USP11-208ENST00000480104 ASS1P00966 412 aaKnown RBP12.05□□□□□ -0.48
USP11-208ENST00000480104 MAZP56270 477 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms