RNA–Protein interactions for RNA: ENST00000479584.1

CDK5RAP2-211, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 3

Gene CDK5RAP2, Length 611 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-211	ENST00000479584	UBA2	Q9UBT2	640 aa	Predicted RBP	12.5	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	ZFR2	Q9UPR6	939 aa	Known RBP	12.5	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	NEU3	Q9UQ49	428 aa		12.5	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	CA5B	Q9Y2D0	317 aa		12.5	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	MFHAS1	Q9Y4C4	1052 aa		12.5	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584		A0A1W2PQJ5	194 aa		12.49	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	NEMP2	A6NFY4	417 aa		12.49	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	IGLON5	A6NGN9	336 aa		12.49	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	DDX3X	O00571	662 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	ATMIN	O43313	823 aa	Predicted RBP	12.49	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	DKK1	O94907	266 aa		12.49	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	ALPPL2	P10696	532 aa		12.49	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	GK	P32189	559 aa		12.49	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	HNF1B	P35680	557 aa		12.49	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	RABIF	P47224	123 aa		12.49	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	CLDN2	P57739	230 aa		12.49	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	OGDH	Q02218	1023 aa		12.49	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	ILK	Q13418	452 aa		12.49	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	NFKBIB	Q15653	356 aa		12.49	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	SKOR2	Q2VWA4	1001 aa	Predicted RBP	12.49	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	BOLA3	Q53S33	107 aa		12.49	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	PPP6R3	Q5H9R7	873 aa	Predicted RBP	12.49	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	PTAR1	Q7Z6K3	402 aa	Predicted RBP	12.49	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	ABI3BP	Q7Z7G0	1075 aa		12.49	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	TMPRSS12	Q86WS5	348 aa		12.49	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	PAF1	Q8N7H5	531 aa		12.49	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	HCAR2	Q8TDS4	363 aa		12.49	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	ASB12	Q8WXK4	309 aa		12.49	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	SPOCK2	Q92563	424 aa		12.49	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	LENG8	Q96PV6	779 aa	Predicted RBP	12.49	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	FUCA2	Q9BTY2	467 aa		12.49	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	12.49	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	CCDC86	Q9H6F5	360 aa	Known RBP	12.49	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	NOL6	Q9H6R4	1146 aa	Known RBP	12.49	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	ZWILCH	Q9H900	591 aa		12.49	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	FZD3	Q9NPG1	666 aa		12.49	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	EVA1B	Q9NVM1	165 aa		12.49	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	TOR4A	Q9NXH8	423 aa		12.49	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	LUC7L2	Q9Y383	392 aa	Known RBP	12.49	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584		H3BM21	787 aa		12.48	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	RNF103	O00237	685 aa		12.48	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	SDC3	O75056	442 aa		12.48	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	RFPL3	O75679	317 aa		12.48	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	PALM	O75781	387 aa		12.48	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	SERPING1	P05155	500 aa		12.48	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	JUP	P14923	745 aa		12.48	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	CKMT2	P17540	419 aa		12.48	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	MIP	P30301	263 aa		12.48	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	PCK1	P35558	622 aa		12.48	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	ARL4A	P40617	200 aa		12.48	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	HCAR3	P49019	387 aa		12.48	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	PAPOLA	P51003	745 aa	Known RBP	12.48	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	HNRNPK	P61978	463 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	ZBED6	P86452	979 aa		12.48	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	ZNF211	Q13398	564 aa	Predicted RBP	12.48	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	PIGH	Q14442	188 aa	Predicted RBP	12.48	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	DHRS13	Q6UX07	377 aa		12.48	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	RFX8	Q6ZV50	586 aa		12.48	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	DNAAF5	Q86Y56	855 aa		12.48	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	LZTR1	Q8N653	840 aa		12.48	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	OR13H1	Q8NG92	308 aa		12.48	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	CXorf40A	Q8TE69	158 aa		12.48	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	CPLX3	Q8WVH0	158 aa		12.48	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	C1QTNF2	Q9BXJ5	285 aa		12.48	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	CPEB1	Q9BZB8	566 aa	Known RBP	12.48	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	ISCU	Q9H1K1	167 aa		12.48	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	GPATCH2L	Q9NWQ4	482 aa		12.48	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	DNAJC28	Q9NX36	388 aa		12.48	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	DKK3	Q9UBP4	350 aa		12.48	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584		H3BRJ5	948 aa		12.47	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	DFFA	O00273	331 aa		12.47	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	PRAMEF11	O60813	436 aa		12.47	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	TM7SF2	O76062	418 aa		12.47	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	DGKA	P23743	735 aa		12.47	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	THOP1	P52888	689 aa		12.47	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	ELP6	Q0PNE2	266 aa		12.47	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	PTK2B	Q14289	1009 aa		12.47	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	SMAD1	Q15797	465 aa	Known RBP	12.47	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	ERAP2	Q6P179	960 aa		12.47	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	KYAT3	Q6YP21	454 aa	Known RBP	12.47	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	GCNT7	Q6ZNI0	430 aa		12.47	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	PDCD7	Q8N8D1	485 aa	Known RBP	12.47	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	DENND6B	Q8NEG7	585 aa		12.47	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	CELF6	Q96J87	481 aa	Known RBP	12.47	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	BMF	Q96LC9	184 aa		12.47	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	ZNF641	Q96N77	438 aa	Predicted RBP	12.47	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	SNRNP25	Q9BV90	132 aa	Known RBP	12.47	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	KLC2	Q9H0B6	622 aa		12.47	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	LRRC19	Q9H756	370 aa		12.47	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	ATP13A3	Q9H7F0	1226 aa		12.47	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	SP110	Q9HB58	689 aa		12.47	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	CAPN11	Q9UMQ6	739 aa		12.47	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	12.47	□□□□□ -0.41	4e-7	■■■□□ 17
CDK5RAP2-211	ENST00000479584	SPTY2D1-AS1	A0A0U1RR47	76 aa		12.46	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	POM121B	A6NF01	834 aa		12.46	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	SRRM3	A6NNA2	597 aa	Predicted RBP	12.46	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584		J3KR12	359 aa		12.46	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	TOR1B	O14657	336 aa		12.46	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	AREL1	O15033	823 aa		12.46	□□□□□ -0.41
CDK5RAP2-211	ENST00000479584	LRCH4	O75427	683 aa		12.46	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms