RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 SIK2Q9H0K1 926 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 MUC3BQ9H195 1237 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 WDCPQ9H6R7 721 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 POLR1BQ9H9Y6 1135 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 ACP6Q9NPH0 428 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 ANO10Q9NW15 660 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 VPS28Q9UK41 221 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 TPX2Q9ULW0 747 aaKnown RBP6.8□□□□□ -1.32
VCP-205ENST00000479300 DAAM1Q9Y4D1 1078 aa6.8□□□□□ -1.32
VCP-205ENST00000479300 DOPEY2Q9Y3R5 2298 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 CCDC189A1A4V9 331 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 ANKRD62A6NC57 917 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 TMCO5BA8MYB1 307 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 GOLGA8SH3BPF8 625 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 SMAPO00193 183 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 TERTO14746 1132 aaKnown RBP6.79□□□□□ -1.32
VCP-205ENST00000479300 ZSCAN12O43309 604 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 PLRG1O43660 514 aaKnown RBP6.79□□□□□ -1.32
VCP-205ENST00000479300 BNIP3LO60238 219 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 CLDN11O75508 207 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 PIAS2O75928 621 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 LSM8O95777 96 aaKnown RBP6.79□□□□□ -1.32
VCP-205ENST00000479300 ERBB2P04626 1255 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 RHOCP08134 193 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 CYP11B1P15538 503 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 PRLRP16471 622 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 C5AR1P21730 350 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 TGM2P21980 687 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 RECQLP46063 649 aaPredicted RBP6.79□□□□□ -1.32
VCP-205ENST00000479300 UCNP55089 124 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 CDH4P55283 916 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 NFKB2Q00653 900 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 E2F1Q01094 437 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 APBA1Q02410 837 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 CNTN1Q12860 1018 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 SRSF6Q13247 344 aaKnown RBP6.79□□□□□ -1.32
VCP-205ENST00000479300 AUHQ13825 339 aaKnown RBP6.79□□□□□ -1.32
VCP-205ENST00000479300 TUBB2AQ13885 445 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 TAF5Q15542 800 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 LONRF2Q1L5Z9 754 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 ARL13BQ3SXY8 428 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 LINC00303Q3SY05 128 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 DNAJC21Q5F1R6 531 aaKnown RBP6.79□□□□□ -1.32
VCP-205ENST00000479300 TCP11X2Q5H9J9 407 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 KLHDC7AQ5VTJ3 777 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 IGF2-ASQ6U949 168 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 SLC26A9Q7LBE3 791 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 HDXQ7Z353 690 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 TRIM69Q86WT6 500 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 CIR1Q86X95 450 aaPredicted RBP6.79□□□□□ -1.32
VCP-205ENST00000479300 ZNF677Q86XU0 584 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 IRF2BP1Q8IU81 584 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 FAM71AQ8IYT1 594 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 SLC22A18ASQ8N1D0 253 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 OXR1Q8N573 874 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 LRRN4CLQ8ND94 238 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 OR13H1Q8NG92 308 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 OR52K2Q8NGK3 314 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 KLK6Q92876 244 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 APOLD1Q96LR9 279 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 MYOCQ99972 504 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 TUBB2BQ9BVA1 445 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 C2orf49Q9BVC5 232 aaPredicted RBP6.79□□□□□ -1.32
VCP-205ENST00000479300 CARD6Q9BX69 1037 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 STK33Q9BYT3 514 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 OSBPL2Q9H1P3 480 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 VPS16Q9H269 839 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 SIX2Q9NPC8 291 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 FZD3Q9NPG1 666 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 PLCB1Q9NQ66 1216 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 DYRK4Q9NR20 520 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 TAB2Q9NYJ8 693 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 VANGL2Q9ULK5 521 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 SATB2Q9UPW6 733 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 TDRD6O60522 2096 aaKnown RBP6.79□□□□□ -1.32
VCP-205ENST00000479300 RELNP78509 3460 aa6.79□□□□□ -1.32
VCP-205ENST00000479300 USP9YO00507 2555 aaPredicted RBP6.78□□□□□ -1.32
VCP-205ENST00000479300 CDRT15L2A8MXV6 281 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 H3BQF6 201 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 MAGEC1O60732 1142 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 PAGE1O75459 146 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 NEBLO76041 1014 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 GFPT2O94808 682 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 IGLV3-25P01717 112 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 UCHL3P15374 230 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 CD46P15529 392 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 ITGB6P18564 788 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 NUDT1P36639 197 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 SCNN1AP37088 669 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 STAT1P42224 750 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 CSRP3P50461 194 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 IRAK1P51617 712 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 PDX1P52945 283 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 PLK1P53350 603 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 CLDN2P57739 230 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 PITX1P78337 314 aaPredicted RBP6.78□□□□□ -1.32
VCP-205ENST00000479300 DAB2P98082 770 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 KCNMA1Q12791 1236 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 OVGP1Q12889 678 aa6.78□□□□□ -1.32
VCP-205ENST00000479300 CLN3Q13286 438 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 464.5 ms