RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 HS3ST3A1Q9Y663 406 aa11.84□□□□□ -0.51
VARS2-208ENST00000477052 FPGTO14772 594 aa11.83□□□□□ -0.52
VARS2-208ENST00000477052 KDELR3O43731 214 aa11.83□□□□□ -0.52
VARS2-208ENST00000477052 AP1G1O43747 822 aa11.83□□□□□ -0.52
VARS2-208ENST00000477052 CREB3O43889 395 aa11.83□□□□□ -0.52
VARS2-208ENST00000477052 USP12O75317 370 aa11.83□□□□□ -0.52
VARS2-208ENST00000477052 CSO75390 466 aaKnown RBP11.83□□□□□ -0.52
VARS2-208ENST00000477052 GCATO75600 419 aa11.83□□□□□ -0.52
VARS2-208ENST00000477052 ZIC2O95409 532 aaPredicted RBP11.83□□□□□ -0.52
VARS2-208ENST00000477052 CSF2P04141 144 aa11.83□□□□□ -0.52
VARS2-208ENST00000477052 PRKCGP05129 697 aa11.83□□□□□ -0.52
VARS2-208ENST00000477052 CELA2BP08218 269 aaPredicted RBP11.83□□□□□ -0.52
VARS2-208ENST00000477052 JUNDP17535 347 aa11.83□□□□□ -0.52
VARS2-208ENST00000477052 GPD1P21695 349 aa11.83□□□□□ -0.52
VARS2-208ENST00000477052 TGM2P21980 687 aa11.83□□□□□ -0.52
VARS2-208ENST00000477052 EPHB2P29323 1055 aa11.83□□□□□ -0.52
VARS2-208ENST00000477052 IGFALSP35858 605 aa11.83□□□□□ -0.52
VARS2-208ENST00000477052 STAT1P42224 750 aa11.83□□□□□ -0.52
VARS2-208ENST00000477052 PTPN9P43378 593 aa11.83□□□□□ -0.52
VARS2-208ENST00000477052 NSFP46459 744 aaKnown RBP11.83□□□□□ -0.52
VARS2-208ENST00000477052 MAPKAPK2P49137 400 aa11.83□□□□□ -0.52
VARS2-208ENST00000477052 RPL7AP62424 266 aaKnown RBP11.83□□□□□ -0.52
VARS2-208ENST00000477052 E2F1Q01094 437 aa11.83□□□□□ -0.52
VARS2-208ENST00000477052 NRG1Q02297 640 aaPredicted RBP11.83□□□□□ -0.52
VARS2-208ENST00000477052 FKBP15Q5T1M5 1219 aa11.83□□□□□ -0.52
VARS2-208ENST00000477052 ACBD5Q5T8D3 534 aaPredicted RBP11.83□□□□□ -0.52
VARS2-208ENST00000477052 CDCP2Q5VXM1 449 aa11.83□□□□□ -0.52
VARS2-208ENST00000477052 SMYD5Q6GMV2 418 aa11.83□□□□□ -0.52
VARS2-208ENST00000477052 GDPD4Q6W3E5 623 aa11.83□□□□□ -0.52
VARS2-208ENST00000477052 LRRC69Q6ZNQ3 347 aa11.83□□□□□ -0.52
VARS2-208ENST00000477052 STRADAQ7RTN6 431 aa11.83□□□□□ -0.52
VARS2-208ENST00000477052 TTC7BQ86TV6 843 aa11.83□□□□□ -0.52
VARS2-208ENST00000477052 IFI44Q8TCB0 444 aa11.83□□□□□ -0.52
VARS2-208ENST00000477052 BAP1Q92560 729 aa11.83□□□□□ -0.52
VARS2-208ENST00000477052 FGF11Q92914 225 aa11.83□□□□□ -0.52
VARS2-208ENST00000477052 ISG20Q96AZ6 181 aaKnown RBP11.83□□□□□ -0.52
VARS2-208ENST00000477052 HMCESQ96FZ2 354 aa11.83□□□□□ -0.52
VARS2-208ENST00000477052 MCEEQ96PE7 176 aa11.83□□□□□ -0.52
VARS2-208ENST00000477052 SELENOOQ9BVL4 669 aa11.83□□□□□ -0.52
VARS2-208ENST00000477052 MAGEH1Q9H213 219 aa11.83□□□□□ -0.52
VARS2-208ENST00000477052 PRORYQ9H606 182 aa11.83□□□□□ -0.52
VARS2-208ENST00000477052 HPCAL4Q9UM19 191 aa11.83□□□□□ -0.52
VARS2-208ENST00000477052 SHROOM3Q8TF72 1996 aa11.83□□□□□ -0.52
VARS2-208ENST00000477052 CHD5Q8TDI0 1954 aa11.82□□□□□ -0.52
VARS2-208ENST00000477052 A0A1W2PNU3 283 aaPredicted RBP11.82□□□□□ -0.52
VARS2-208ENST00000477052 EIF4E1BA6NMX2 242 aaKnown RBP11.82□□□□□ -0.52
VARS2-208ENST00000477052 MUSKO15146 869 aa11.82□□□□□ -0.52
VARS2-208ENST00000477052 RRP8O43159 456 aaKnown RBP11.82□□□□□ -0.52
VARS2-208ENST00000477052 AQP9O43315 295 aa11.82□□□□□ -0.52
VARS2-208ENST00000477052 TSPAN6O43657 245 aa11.82□□□□□ -0.52
VARS2-208ENST00000477052 PIGNO95427 931 aa11.82□□□□□ -0.52
VARS2-208ENST00000477052 POP4O95707 220 aaKnown RBP11.82□□□□□ -0.52
VARS2-208ENST00000477052 GSRP00390 522 aa11.82□□□□□ -0.52
VARS2-208ENST00000477052 ALPPL2P10696 532 aa11.82□□□□□ -0.52
VARS2-208ENST00000477052 NME1P15531 152 aaKnown RBP11.82□□□□□ -0.52
VARS2-208ENST00000477052 TIMP2P16035 220 aa11.82□□□□□ -0.52
VARS2-208ENST00000477052 RABIFP47224 123 aa11.82□□□□□ -0.52
VARS2-208ENST00000477052 PFN3P60673 137 aa11.82□□□□□ -0.52
VARS2-208ENST00000477052 RHOAP61586 193 aa11.82□□□□□ -0.52
VARS2-208ENST00000477052 HNRNPKP61978 463 aaKnown RBP eCLIP11.82□□□□□ -0.52
VARS2-208ENST00000477052 SNRPD1P62314 119 aaKnown RBP11.82□□□□□ -0.52
VARS2-208ENST00000477052 GABREP78334 506 aa11.82□□□□□ -0.52
VARS2-208ENST00000477052 OGDHQ02218 1023 aa11.82□□□□□ -0.52
VARS2-208ENST00000477052 C1QBPQ07021 282 aaKnown RBP11.82□□□□□ -0.52
VARS2-208ENST00000477052 TBC1D25Q3MII6 688 aa11.82□□□□□ -0.52
VARS2-208ENST00000477052 PERM1Q5SV97 790 aa11.82□□□□□ -0.52
VARS2-208ENST00000477052 MON1BQ7L1V2 547 aa11.82□□□□□ -0.52
VARS2-208ENST00000477052 EFL1Q7Z2Z2 1120 aaKnown RBP11.82□□□□□ -0.52
VARS2-208ENST00000477052 SLFN11Q7Z7L1 901 aa11.82□□□□□ -0.52
VARS2-208ENST00000477052 PARGQ86W56 976 aa11.82□□□□□ -0.52
VARS2-208ENST00000477052 NEK11Q8NG66 645 aa11.82□□□□□ -0.52
VARS2-208ENST00000477052 MAPK15Q8TD08 544 aa11.82□□□□□ -0.52
VARS2-208ENST00000477052 CENPTQ96BT3 561 aa11.82□□□□□ -0.52
VARS2-208ENST00000477052 CELF6Q96J87 481 aaKnown RBP11.82□□□□□ -0.52
VARS2-208ENST00000477052 FCRL3Q96P31 734 aaPredicted RBP11.82□□□□□ -0.52
VARS2-208ENST00000477052 ABCG4Q9H172 646 aa11.82□□□□□ -0.52
VARS2-208ENST00000477052 TAS2R14Q9NYV8 317 aa11.82□□□□□ -0.52
VARS2-208ENST00000477052 LHX3Q9UBR4 397 aa11.82□□□□□ -0.52
VARS2-208ENST00000477052 PTPRQQ9UMZ3 2332 aa11.81□□□□□ -0.52
VARS2-208ENST00000477052 TCRBV5S1A1TA0A578 114 aa11.81□□□□□ -0.52
VARS2-208ENST00000477052 NEMP2A6NFY4 417 aa11.81□□□□□ -0.52
VARS2-208ENST00000477052 SIGLEC16A6NMB1 481 aa11.81□□□□□ -0.52
VARS2-208ENST00000477052 TMCO5BA8MYB1 307 aa11.81□□□□□ -0.52
VARS2-208ENST00000477052 RASA4BC9J798 803 aa11.81□□□□□ -0.52
VARS2-208ENST00000477052 J3KR12 359 aa11.81□□□□□ -0.52
VARS2-208ENST00000477052 AREL1O15033 823 aa11.81□□□□□ -0.52
VARS2-208ENST00000477052 ATMINO43313 823 aaPredicted RBP11.81□□□□□ -0.52
VARS2-208ENST00000477052 RASA4O43374 803 aa11.81□□□□□ -0.52
VARS2-208ENST00000477052 ACTN2P35609 894 aa11.81□□□□□ -0.52
VARS2-208ENST00000477052 ETFBP38117 255 aa11.81□□□□□ -0.52
VARS2-208ENST00000477052 ADKP55263 362 aaKnown RBP11.81□□□□□ -0.52
VARS2-208ENST00000477052 CXADRP78310 365 aa11.81□□□□□ -0.52
VARS2-208ENST00000477052 UBXN1Q04323 297 aa11.81□□□□□ -0.52
VARS2-208ENST00000477052 TLE3Q04726 772 aa11.81□□□□□ -0.52
VARS2-208ENST00000477052 CYTH1Q15438 398 aa11.81□□□□□ -0.52
VARS2-208ENST00000477052 KLHL40Q2TBA0 621 aa11.81□□□□□ -0.52
VARS2-208ENST00000477052 PRRT3Q5FWE3 981 aa11.81□□□□□ -0.52
VARS2-208ENST00000477052 EFHC2Q5JST6 749 aa11.81□□□□□ -0.52
VARS2-208ENST00000477052 KCTD16Q68DU8 428 aa11.81□□□□□ -0.52
VARS2-208ENST00000477052 DNAJC24Q6P3W2 148 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms