RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 SPATS2Q86XZ4 545 aaKnown RBP21.46■■□□□ 1.03
LIME1-204ENST00000476183 MFSD2AQ8NA29 543 aa21.46■■□□□ 1.03
LIME1-204ENST00000476183 TMEM145Q8NBT3 493 aa21.46■■□□□ 1.03
LIME1-204ENST00000476183 SKA1Q96BD8 255 aa21.46■■□□□ 1.03
LIME1-204ENST00000476183 CSPG4P5Q96PW8 444 aa21.46■■□□□ 1.03
LIME1-204ENST00000476183 MYOCQ99972 504 aa21.46■■□□□ 1.03
LIME1-204ENST00000476183 OSBPL1AQ9BXW6 950 aa21.46■■□□□ 1.03
LIME1-204ENST00000476183 DEF6Q9H4E7 631 aa21.46■■□□□ 1.03
LIME1-204ENST00000476183 PCDH18Q9HCL0 1135 aa21.46■■□□□ 1.03
LIME1-204ENST00000476183 FZD3Q9NPG1 666 aa21.46■■□□□ 1.03
LIME1-204ENST00000476183 GGT7Q9UJ14 662 aa21.46■■□□□ 1.03
LIME1-204ENST00000476183 PCOLCE2Q9UKZ9 415 aa21.46■■□□□ 1.03
LIME1-204ENST00000476183 BTBD3Q9Y2F9 522 aa21.46■■□□□ 1.03
LIME1-204ENST00000476183 A0A1B0GTQ1 180 aa21.45■■□□□ 1.02
LIME1-204ENST00000476183 PRAMEF26H0Y7S4 382 aa21.45■■□□□ 1.02
LIME1-204ENST00000476183 AP1G1O43747 822 aa21.45■■□□□ 1.02
LIME1-204ENST00000476183 AKR1B10O60218 316 aa21.45■■□□□ 1.02
LIME1-204ENST00000476183 H2AFZP0C0S5 128 aa21.45■■□□□ 1.02
LIME1-204ENST00000476183 ARL4AP40617 200 aa21.45■■□□□ 1.02
LIME1-204ENST00000476183 CCT8P50990 548 aa21.45■■□□□ 1.02
LIME1-204ENST00000476183 FGL2Q14314 439 aa21.45■■□□□ 1.02
LIME1-204ENST00000476183 SHBQ15464 509 aa21.45■■□□□ 1.02
LIME1-204ENST00000476183 TSR1Q2NL82 804 aaKnown RBP21.45■■□□□ 1.02
LIME1-204ENST00000476183 H2AFVQ71UI9 128 aa21.45■■□□□ 1.02
LIME1-204ENST00000476183 SETD7Q8WTS6 366 aaKnown RBP21.45■■□□□ 1.02
LIME1-204ENST00000476183 CTNNBL1Q8WYA6 563 aaPredicted RBP21.45■■□□□ 1.02
LIME1-204ENST00000476183 TSC1Q92574 1164 aa21.45■■□□□ 1.02
LIME1-204ENST00000476183 ELF4Q99607 663 aaPredicted RBP21.45■■□□□ 1.02
LIME1-204ENST00000476183 NHEJ1Q9H9Q4 299 aaPredicted RBP21.45■■□□□ 1.02
LIME1-204ENST00000476183 SPTLC3Q9NUV7 552 aa21.45■■□□□ 1.02
LIME1-204ENST00000476183 UVRAGQ9P2Y5 699 aa21.45■■□□□ 1.02
LIME1-204ENST00000476183 WASF3Q9UPY6 502 aa21.45■■□□□ 1.02
LIME1-204ENST00000476183 ITM2BQ9Y287 266 aa21.45■■□□□ 1.02
LIME1-204ENST00000476183 PROSCO94903 275 aa21.44■■□□□ 1.02
LIME1-204ENST00000476183 PIGNO95427 931 aa21.44■■□□□ 1.02
LIME1-204ENST00000476183 TOP3BO95985 862 aaKnown RBP21.44■■□□□ 1.02
LIME1-204ENST00000476183 CD48P09326 243 aa21.44■■□□□ 1.02
LIME1-204ENST00000476183 IL4RP24394 825 aa21.44■■□□□ 1.02
LIME1-204ENST00000476183 RGRP47804 291 aa21.44■■□□□ 1.02
LIME1-204ENST00000476183 STAT4Q14765 748 aa21.44■■□□□ 1.02
LIME1-204ENST00000476183 TRIP6Q15654 476 aaKnown RBP21.44■■□□□ 1.02
LIME1-204ENST00000476183 ATP13A4Q4VNC1 1196 aa21.44■■□□□ 1.02
LIME1-204ENST00000476183 SLC45A4Q5BKX6 768 aa21.44■■□□□ 1.02
LIME1-204ENST00000476183 LRRC73Q5JTD7 316 aa21.44■■□□□ 1.02
LIME1-204ENST00000476183 BAHD1Q8TBE0 780 aaPredicted RBP21.44■■□□□ 1.02
LIME1-204ENST00000476183 TRIM5Q9C035 493 aa21.44■■□□□ 1.02
LIME1-204ENST00000476183 GDF3Q9NR23 364 aa21.44■■□□□ 1.02
LIME1-204ENST00000476183 IPO11Q9UI26 975 aaKnown RBP21.44■■□□□ 1.02
LIME1-204ENST00000476183 AKR1B15C9JRZ8 316 aaPredicted RBP21.43■■□□□ 1.02
LIME1-204ENST00000476183 FLRT2O43155 660 aa21.43■■□□□ 1.02
LIME1-204ENST00000476183 PCDHGA12O60330 932 aa21.43■■□□□ 1.02
LIME1-204ENST00000476183 TMEM253P0C7T8 217 aa21.43■■□□□ 1.02
LIME1-204ENST00000476183 SSR1P43307 286 aaKnown RBP21.43■■□□□ 1.02
LIME1-204ENST00000476183 ARSEP51690 589 aa21.43■■□□□ 1.02
LIME1-204ENST00000476183 CDH6P55285 790 aa21.43■■□□□ 1.02
LIME1-204ENST00000476183 TAS2R40P59535 323 aa21.43■■□□□ 1.02
LIME1-204ENST00000476183 RAD51Q06609 339 aa21.43■■□□□ 1.02
LIME1-204ENST00000476183 FOXC1Q12948 553 aa21.43■■□□□ 1.02
LIME1-204ENST00000476183 MMRN1Q13201 1228 aa21.43■■□□□ 1.02
LIME1-204ENST00000476183 HNRNPDQ14103 355 aaKnown RBP21.43■■□□□ 1.02
LIME1-204ENST00000476183 KIAA1161Q6NSJ0 714 aa21.43■■□□□ 1.02
LIME1-204ENST00000476183 IQCHQ86VS3 1027 aa21.43■■□□□ 1.02
LIME1-204ENST00000476183 LZTR1Q8N653 840 aa21.43■■□□□ 1.02
LIME1-204ENST00000476183 TSEN2Q8NCE0 465 aaKnown RBP21.43■■□□□ 1.02
LIME1-204ENST00000476183 FAM71BQ8TC56 605 aa21.43■■□□□ 1.02
LIME1-204ENST00000476183 RAB7BQ96AH8 199 aa21.43■■□□□ 1.02
LIME1-204ENST00000476183 FEM1CQ96JP0 617 aa21.43■■□□□ 1.02
LIME1-204ENST00000476183 CCDC42Q96M95 316 aa21.43■■□□□ 1.02
LIME1-204ENST00000476183 CPEB1Q9BZB8 566 aaKnown RBP21.43■■□□□ 1.02
LIME1-204ENST00000476183 RBSNQ9H1K0 784 aa21.43■■□□□ 1.02
LIME1-204ENST00000476183 SP110Q9HB58 689 aa21.43■■□□□ 1.02
LIME1-204ENST00000476183 ANGPTL2Q9UKU9 493 aa21.43■■□□□ 1.02
LIME1-204ENST00000476183 AREL1O15033 823 aa21.42■■□□□ 1.02
LIME1-204ENST00000476183 DFNA5O60443 496 aa21.42■■□□□ 1.02
LIME1-204ENST00000476183 BUB1BO60566 1050 aaPredicted RBP21.42■■□□□ 1.02
LIME1-204ENST00000476183 PALMO75781 387 aa21.42■■□□□ 1.02
LIME1-204ENST00000476183 TIMP2P16035 220 aa21.42■■□□□ 1.02
LIME1-204ENST00000476183 ITIH2P19823 946 aa21.42■■□□□ 1.02
LIME1-204ENST00000476183 HNRNPA2B1P22626 353 aaKnown RBP21.42■■□□□ 1.02
LIME1-204ENST00000476183 CLDN2P57739 230 aa21.42■■□□□ 1.02
LIME1-204ENST00000476183 RPS21P63220 83 aaKnown RBP21.42■■□□□ 1.02
LIME1-204ENST00000476183 SHC2P98077 582 aa21.42■■□□□ 1.02
LIME1-204ENST00000476183 IL10RBQ08334 325 aa21.42■■□□□ 1.02
LIME1-204ENST00000476183 KRT81Q14533 505 aa21.42■■□□□ 1.02
LIME1-204ENST00000476183 SUZ12Q15022 739 aaKnown RBP21.42■■□□□ 1.02
LIME1-204ENST00000476183 TMCO3Q6UWJ1 677 aa21.42■■□□□ 1.02
LIME1-204ENST00000476183 GCNT7Q6ZNI0 430 aa21.42■■□□□ 1.02
LIME1-204ENST00000476183 TTC7BQ86TV6 843 aa21.42■■□□□ 1.02
LIME1-204ENST00000476183 GATAD2AQ86YP4 633 aa21.42■■□□□ 1.02
LIME1-204ENST00000476183 CNGA4Q8IV77 575 aa21.42■■□□□ 1.02
LIME1-204ENST00000476183 RHBDD1Q8TEB9 315 aa21.42■■□□□ 1.02
LIME1-204ENST00000476183 SLC17A9Q9BYT1 436 aa21.42■■□□□ 1.02
LIME1-204ENST00000476183 DKK3Q9UBP4 350 aa21.42■■□□□ 1.02
LIME1-204ENST00000476183 PCDHB9Q9Y5E1 797 aa21.42■■□□□ 1.02
LIME1-204ENST00000476183 FRYQ5TBA9 3013 aa21.41■■□□□ 1.02
LIME1-204ENST00000476183 IGLON5A6NGN9 336 aa21.41■■□□□ 1.02
LIME1-204ENST00000476183 MUSKO15146 869 aa21.41■■□□□ 1.02
LIME1-204ENST00000476183 RAD51BO15315 384 aa21.41■■□□□ 1.02
LIME1-204ENST00000476183 TSPAN6O43657 245 aa21.41■■□□□ 1.02
LIME1-204ENST00000476183 PEX11BO96011 259 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms