RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 SLC6A3Q01959 620 aa10.66□□□□□ -0.7
CALD1-217ENST00000475772 NME3Q13232 169 aa10.66□□□□□ -0.7
CALD1-217ENST00000475772 OCLNQ16625 522 aa10.66□□□□□ -0.7
CALD1-217ENST00000475772 ARHGAP44Q17R89 818 aa10.66□□□□□ -0.7
CALD1-217ENST00000475772 TPRG1LQ5T0D9 272 aa10.66□□□□□ -0.7
CALD1-217ENST00000475772 LINGO4Q6UY18 593 aa10.66□□□□□ -0.7
CALD1-217ENST00000475772 C11orf57Q6ZUT1 292 aaPredicted RBP10.66□□□□□ -0.7
CALD1-217ENST00000475772 IRF2BP1Q8IU81 584 aa10.66□□□□□ -0.7
CALD1-217ENST00000475772 PASD1Q8IV76 773 aa10.66□□□□□ -0.7
CALD1-217ENST00000475772 ALDH16A1Q8IZ83 802 aa10.66□□□□□ -0.7
CALD1-217ENST00000475772 FAM181AQ8N9Y4 354 aa10.66□□□□□ -0.7
CALD1-217ENST00000475772 ATP11CQ8NB49 1132 aa10.66□□□□□ -0.7
CALD1-217ENST00000475772 C1orf131Q8NDD1 294 aaKnown RBP10.66□□□□□ -0.7
CALD1-217ENST00000475772 ZNF397Q8NF99 534 aaPredicted RBP10.66□□□□□ -0.7
CALD1-217ENST00000475772 SHC3Q92529 594 aa10.66□□□□□ -0.7
CALD1-217ENST00000475772 RNF34Q969K3 372 aa10.66□□□□□ -0.7
CALD1-217ENST00000475772 NT5C3BQ969T7 300 aa10.66□□□□□ -0.7
CALD1-217ENST00000475772 NAF1Q96HR8 494 aaKnown RBP10.66□□□□□ -0.7
CALD1-217ENST00000475772 PPP1R9BQ96SB3 815 aa10.66□□□□□ -0.7
CALD1-217ENST00000475772 TKTL2Q9H0I9 626 aa10.66□□□□□ -0.7
CALD1-217ENST00000475772 SIX2Q9NPC8 291 aa10.66□□□□□ -0.7
CALD1-217ENST00000475772 ACTL7AQ9Y615 435 aa10.66□□□□□ -0.7
CALD1-217ENST00000475772 GPC6Q9Y625 555 aaPredicted RBP10.66□□□□□ -0.7
CALD1-217ENST00000475772 HS3ST3A1Q9Y663 406 aa10.66□□□□□ -0.7
CALD1-217ENST00000475772 TENM4Q6N022 2769 aa10.65□□□□□ -0.7
CALD1-217ENST00000475772 AHCTF1Q8WYP5 2266 aa10.65□□□□□ -0.7
CALD1-217ENST00000475772 LRRK1Q38SD2 2015 aa10.65□□□□□ -0.7
CALD1-217ENST00000475772 IGLV3-10A0A075B6K4 115 aa10.65□□□□□ -0.7
CALD1-217ENST00000475772 BICDL2A1A5D9 508 aa10.65□□□□□ -0.7
CALD1-217ENST00000475772 GOLGA6L4A6NEF3 574 aa10.65□□□□□ -0.7
CALD1-217ENST00000475772 K7ESM1 405 aa10.65□□□□□ -0.7
CALD1-217ENST00000475772 FOXN3O00409 490 aaPredicted RBP10.65□□□□□ -0.7
CALD1-217ENST00000475772 KPNA3O00505 521 aaPredicted RBP10.65□□□□□ -0.7
CALD1-217ENST00000475772 SCAMP1O15126 338 aa10.65□□□□□ -0.7
CALD1-217ENST00000475772 DAB1O75553 588 aa10.65□□□□□ -0.7
CALD1-217ENST00000475772 ZMPSTE24O75844 475 aa10.65□□□□□ -0.7
CALD1-217ENST00000475772 NEBLO76041 1014 aa10.65□□□□□ -0.7
CALD1-217ENST00000475772 PAK4O96013 591 aaPredicted RBP10.65□□□□□ -0.7
CALD1-217ENST00000475772 HNRNPA2B1P22626 353 aaKnown RBP10.65□□□□□ -0.7
CALD1-217ENST00000475772 PON1P27169 355 aa10.65□□□□□ -0.7
CALD1-217ENST00000475772 CXADRP78310 365 aa10.65□□□□□ -0.7
CALD1-217ENST00000475772 KRT83P78385 493 aa10.65□□□□□ -0.7
CALD1-217ENST00000475772 DAB2P98082 770 aa10.65□□□□□ -0.7
CALD1-217ENST00000475772 FZD2Q14332 565 aa10.65□□□□□ -0.7
CALD1-217ENST00000475772 TRNP1Q6NT89 227 aa10.65□□□□□ -0.7
CALD1-217ENST00000475772 DPY19L3Q6ZPD9 716 aa10.65□□□□□ -0.7
CALD1-217ENST00000475772 Q6ZSR6 202 aa10.65□□□□□ -0.7
CALD1-217ENST00000475772 ERN2Q76MJ5 926 aaKnown RBP10.65□□□□□ -0.7
CALD1-217ENST00000475772 ENOSF1Q7L5Y1 443 aa10.65□□□□□ -0.7
CALD1-217ENST00000475772 SLC26A9Q7LBE3 791 aa10.65□□□□□ -0.7
CALD1-217ENST00000475772 BNIPLQ7Z465 357 aa10.65□□□□□ -0.7
CALD1-217ENST00000475772 SETD3Q86TU7 594 aaPredicted RBP10.65□□□□□ -0.7
CALD1-217ENST00000475772 OR7D4Q8NG98 312 aa10.65□□□□□ -0.7
CALD1-217ENST00000475772 PGAP3Q96FM1 320 aaPredicted RBP10.65□□□□□ -0.7
CALD1-217ENST00000475772 PRR11Q96HE9 360 aaPredicted RBP10.65□□□□□ -0.7
CALD1-217ENST00000475772 KLF6Q99612 283 aaPredicted RBP10.65□□□□□ -0.7
CALD1-217ENST00000475772 HDAC8Q9BY41 377 aa10.65□□□□□ -0.7
CALD1-217ENST00000475772 SEMA4CQ9C0C4 833 aa10.65□□□□□ -0.7
CALD1-217ENST00000475772 MUC3BQ9H195 1237 aa10.65□□□□□ -0.7
CALD1-217ENST00000475772 OSBPL2Q9H1P3 480 aa10.65□□□□□ -0.7
CALD1-217ENST00000475772 TNKS2Q9H2K2 1166 aa10.65□□□□□ -0.7
CALD1-217ENST00000475772 WDCPQ9H6R7 721 aa10.65□□□□□ -0.7
CALD1-217ENST00000475772 CPNE5Q9HCH3 593 aa10.65□□□□□ -0.7
CALD1-217ENST00000475772 ASCL3Q9NQ33 180 aa10.65□□□□□ -0.7
CALD1-217ENST00000475772 PLCB1Q9NQ66 1216 aa10.65□□□□□ -0.7
CALD1-217ENST00000475772 MPP6Q9NZW5 540 aa10.65□□□□□ -0.7
CALD1-217ENST00000475772 PNMA8BQ9ULN7 279 aaPredicted RBP10.65□□□□□ -0.7
CALD1-217ENST00000475772 PIEZO2Q9H5I5 2752 aa10.65□□□□□ -0.71
CALD1-217ENST00000475772 BSNQ9UPA5 3926 aa10.64□□□□□ -0.71
CALD1-217ENST00000475772 PRMT3O60678 531 aa10.64□□□□□ -0.71
CALD1-217ENST00000475772 GADD45BO75293 160 aaPredicted RBP10.64□□□□□ -0.71
CALD1-217ENST00000475772 USP12O75317 370 aa10.64□□□□□ -0.71
CALD1-217ENST00000475772 LEFTY1O75610 366 aa10.64□□□□□ -0.71
CALD1-217ENST00000475772 ENDOD1O94919 500 aa10.64□□□□□ -0.71
CALD1-217ENST00000475772 PCDH8O95206 1070 aa10.64□□□□□ -0.71
CALD1-217ENST00000475772 RHOCP08134 193 aa10.64□□□□□ -0.71
CALD1-217ENST00000475772 PNMA6AP0CW24 399 aaPredicted RBP10.64□□□□□ -0.71
CALD1-217ENST00000475772 TGM2P21980 687 aa10.64□□□□□ -0.71
CALD1-217ENST00000475772 AKT2P31751 481 aa10.64□□□□□ -0.71
CALD1-217ENST00000475772 USP8P40818 1118 aa10.64□□□□□ -0.71
CALD1-217ENST00000475772 LSSP48449 732 aa10.64□□□□□ -0.71
CALD1-217ENST00000475772 ARF5P84085 180 aa10.64□□□□□ -0.71
CALD1-217ENST00000475772 PAK1Q13153 545 aa10.64□□□□□ -0.71
CALD1-217ENST00000475772 FIGNL1Q6PIW4 674 aa10.64□□□□□ -0.71
CALD1-217ENST00000475772 ZNF605Q86T29 641 aa10.64□□□□□ -0.71
CALD1-217ENST00000475772 SLC47A2Q86VL8 602 aa10.64□□□□□ -0.71
CALD1-217ENST00000475772 DCAF4L2Q8NA75 395 aa10.64□□□□□ -0.71
CALD1-217ENST00000475772 ZNF248Q8NDW4 579 aa10.64□□□□□ -0.71
CALD1-217ENST00000475772 IFT43Q96FT9 208 aa10.64□□□□□ -0.71
CALD1-217ENST00000475772 C1orf74Q96LT6 269 aa10.64□□□□□ -0.71
CALD1-217ENST00000475772 ZNF578Q96N58 590 aaPredicted RBP10.64□□□□□ -0.71
CALD1-217ENST00000475772 TBCBQ99426 244 aa10.64□□□□□ -0.71
CALD1-217ENST00000475772 CALN1Q9BXU9 219 aa10.64□□□□□ -0.71
CALD1-217ENST00000475772 SLC17A9Q9BYT1 436 aa10.64□□□□□ -0.71
CALD1-217ENST00000475772 NLGN3Q9NZ94 848 aa10.64□□□□□ -0.71
CALD1-217ENST00000475772 APEX2Q9UBZ4 518 aa10.64□□□□□ -0.71
CALD1-217ENST00000475772 IL36AQ9UHA7 158 aa10.64□□□□□ -0.71
CALD1-217ENST00000475772 PCDHGC4Q9Y5F7 938 aa10.64□□□□□ -0.71
CALD1-217ENST00000475772 FADS3Q9Y5Q0 445 aa10.64□□□□□ -0.71
CALD1-217ENST00000475772 SPTY2D1-AS1A0A0U1RR47 76 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms