RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 LIFRP42702 1097 aa2.53□□□□□ -2
CALD1-216ENST00000473714 MAGEA9P43362 315 aa2.53□□□□□ -2
CALD1-216ENST00000473714 ABCG1P45844 678 aa2.53□□□□□ -2
CALD1-216ENST00000473714 TUBP50607 506 aa2.53□□□□□ -2
CALD1-216ENST00000473714 PLCD1P51178 756 aa2.53□□□□□ -2
CALD1-216ENST00000473714 RNASE9P60153 205 aaKnown RBP2.53□□□□□ -2
CALD1-216ENST00000473714 VAMP2P63027 116 aa2.53□□□□□ -2
CALD1-216ENST00000473714 RPP30P78346 268 aaKnown RBP2.53□□□□□ -2
CALD1-216ENST00000473714 HSD11B2P80365 405 aa2.53□□□□□ -2
CALD1-216ENST00000473714 NHLH2Q02577 135 aa2.53□□□□□ -2
CALD1-216ENST00000473714 MYO1EQ12965 1108 aa2.53□□□□□ -2
CALD1-216ENST00000473714 PRKG2Q13237 762 aa2.53□□□□□ -2
CALD1-216ENST00000473714 ATP1A4Q13733 1029 aa2.53□□□□□ -2
CALD1-216ENST00000473714 CBFBQ13951 182 aa2.53□□□□□ -2
CALD1-216ENST00000473714 CAMK1Q14012 370 aa2.53□□□□□ -2
CALD1-216ENST00000473714 DCTN1Q14203 1278 aa2.53□□□□□ -2
CALD1-216ENST00000473714 GRM4Q14833 912 aa2.53□□□□□ -2
CALD1-216ENST00000473714 CCNG2Q16589 344 aa2.53□□□□□ -2
CALD1-216ENST00000473714 NFIL3Q16649 462 aa2.53□□□□□ -2
CALD1-216ENST00000473714 TCTN1Q2MV58 587 aa2.53□□□□□ -2
CALD1-216ENST00000473714 PTCHD3Q3KNS1 767 aa2.53□□□□□ -2
CALD1-216ENST00000473714 CD300EQ496F6 205 aaPredicted RBP2.53□□□□□ -2
CALD1-216ENST00000473714 CTXN3Q4LDR2 81 aa2.53□□□□□ -2
CALD1-216ENST00000473714 LY6G5CQ5SRR4 150 aa2.53□□□□□ -2
CALD1-216ENST00000473714 CERCAMQ5T4B2 595 aa2.53□□□□□ -2
CALD1-216ENST00000473714 DEPDC1Q5TB30 811 aa2.53□□□□□ -2
CALD1-216ENST00000473714 MANEALQ5VSG8 457 aa2.53□□□□□ -2
CALD1-216ENST00000473714 AGAP9Q5VTM2 703 aa2.53□□□□□ -2
CALD1-216ENST00000473714 ICE2Q659A1 982 aa2.53□□□□□ -2
CALD1-216ENST00000473714 ATG16L1Q676U5 607 aa2.53□□□□□ -2
CALD1-216ENST00000473714 LIN54Q6MZP7 749 aa2.53□□□□□ -2
CALD1-216ENST00000473714 TMCO3Q6UWJ1 677 aa2.53□□□□□ -2
CALD1-216ENST00000473714 TMEM184AQ6ZMB5 413 aa2.53□□□□□ -2
CALD1-216ENST00000473714 C1orf122Q6ZSJ8 110 aa2.53□□□□□ -2
CALD1-216ENST00000473714 MCM10Q7L590 875 aa2.53□□□□□ -2
CALD1-216ENST00000473714 GRASPQ7Z6J2 395 aaPredicted RBP2.53□□□□□ -2
CALD1-216ENST00000473714 ADGRD2Q7Z7M1 963 aa2.53□□□□□ -2
CALD1-216ENST00000473714 CHD1LQ86WJ1 897 aa2.53□□□□□ -2
CALD1-216ENST00000473714 TICAM1Q8IUC6 712 aa2.53□□□□□ -2
CALD1-216ENST00000473714 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.53□□□□□ -2
CALD1-216ENST00000473714 TSPYL6Q8N831 410 aa2.53□□□□□ -2
CALD1-216ENST00000473714 C1orf131Q8NDD1 294 aaKnown RBP2.53□□□□□ -2
CALD1-216ENST00000473714 OR56A1Q8NGH5 318 aa2.53□□□□□ -2
CALD1-216ENST00000473714 ZNF384Q8TF68 577 aa2.53□□□□□ -2
CALD1-216ENST00000473714 TBC1D22AQ8WUA7 517 aa2.53□□□□□ -2
CALD1-216ENST00000473714 SLC25A43Q8WUT9 341 aaPredicted RBP2.53□□□□□ -2
CALD1-216ENST00000473714 OSCP1Q8WVF1 389 aa2.53□□□□□ -2
CALD1-216ENST00000473714 SNX19Q92543 992 aa2.53□□□□□ -2
CALD1-216ENST00000473714 RSC1A1Q92681 617 aa2.53□□□□□ -2
CALD1-216ENST00000473714 TEKT1Q969V4 418 aa2.53□□□□□ -2
CALD1-216ENST00000473714 ZUFSPQ96AP4 578 aa2.53□□□□□ -2
CALD1-216ENST00000473714 TMEM125Q96AQ2 219 aa2.53□□□□□ -2
CALD1-216ENST00000473714 SDCCAG3Q96C92 435 aa2.53□□□□□ -2
CALD1-216ENST00000473714 KIF1BPQ96EK5 621 aa2.53□□□□□ -2
CALD1-216ENST00000473714 REXO5Q96IC2 774 aaKnown RBP2.53□□□□□ -2
CALD1-216ENST00000473714 FAM227BQ96M60 508 aa2.53□□□□□ -2
CALD1-216ENST00000473714 NECTIN4Q96NY8 510 aa2.53□□□□□ -2
CALD1-216ENST00000473714 MED15Q96RN5 788 aa2.53□□□□□ -2
CALD1-216ENST00000473714 NELL2Q99435 816 aa2.53□□□□□ -2
CALD1-216ENST00000473714 VKORC1Q9BQB6 163 aa2.53□□□□□ -2
CALD1-216ENST00000473714 ANKRD2Q9GZV1 360 aa2.53□□□□□ -2
CALD1-216ENST00000473714 PAIP1Q9H074 479 aaKnown RBP2.53□□□□□ -2
CALD1-216ENST00000473714 ENKD1Q9H0I2 346 aa2.53□□□□□ -2
CALD1-216ENST00000473714 UPF3AQ9H1J1 476 aaKnown RBP2.53□□□□□ -2
CALD1-216ENST00000473714 TOR3AQ9H497 397 aa2.53□□□□□ -2
CALD1-216ENST00000473714 SERHL2Q9H4I8 314 aa2.53□□□□□ -2
CALD1-216ENST00000473714 ACAD9Q9H845 621 aa2.53□□□□□ -2
CALD1-216ENST00000473714 AGO3Q9H9G7 860 aaKnown RBP2.53□□□□□ -2
CALD1-216ENST00000473714 TBC1D17Q9HA65 648 aa2.53□□□□□ -2
CALD1-216ENST00000473714 FBXO28Q9NVF7 368 aa2.53□□□□□ -2
CALD1-216ENST00000473714 MRPS18AQ9NVS2 196 aaKnown RBP2.53□□□□□ -2
CALD1-216ENST00000473714 FAM30AQ9NZY2 134 aa2.53□□□□□ -2
CALD1-216ENST00000473714 LPAR3Q9UBY5 353 aa2.53□□□□□ -2
CALD1-216ENST00000473714 NKX1-2Q9UD57 310 aaPredicted RBP2.53□□□□□ -2
CALD1-216ENST00000473714 POLG2Q9UHN1 485 aa2.53□□□□□ -2
CALD1-216ENST00000473714 CDH22Q9UJ99 828 aa2.53□□□□□ -2
CALD1-216ENST00000473714 SERTAD3Q9UJW9 196 aa2.53□□□□□ -2
CALD1-216ENST00000473714 KCND3Q9UK17 655 aa2.53□□□□□ -2
CALD1-216ENST00000473714 TBX20Q9UMR3 447 aa2.53□□□□□ -2
CALD1-216ENST00000473714 DAPP1Q9UN19 280 aa2.53□□□□□ -2
CALD1-216ENST00000473714 TLN1Q9Y490 2541 aaKnown RBP2.53□□□□□ -2
CALD1-216ENST00000473714 PLXNA4Q9HCM2 1894 aa2.53□□□□□ -2
CALD1-216ENST00000473714 LAMA1P25391 3075 aa2.53□□□□□ -2
CALD1-216ENST00000473714 F8P00451 2351 aa2.53□□□□□ -2
CALD1-216ENST00000473714 FN1P02751 2386 aaKnown RBP2.53□□□□□ -2
CALD1-216ENST00000473714 APC2O95996 2303 aa2.53□□□□□ -2
CALD1-216ENST00000473714 AHCTF1Q8WYP5 2266 aa2.53□□□□□ -2
CALD1-216ENST00000473714 DENND4AQ7Z401 1863 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 SPAG17Q6Q759 2223 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 TBC1D3DA0A087WVF3 549 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 TBC1D3IA0A087WXS9 549 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 A0A087WZ62 844 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 TBC1D3EA0A087X179 549 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 TBC1D3KA0A087X1G2 549 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 A0A1B0GTW7 788 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 A0A1W2PPH5 198 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 PMS2P1A4D2B8 440 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 TBC1D3BA6NDS4 549 aa2.52□□□□□ -2.01
CALD1-216ENST00000473714 TBC1D3FA6NER0 549 aaPredicted RBP2.52□□□□□ -2.01
CALD1-216ENST00000473714 PRSS47A8MTI9 375 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms