RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 KIFC1Q9BW19 673 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 EIF2AQ9BY44 585 aaKnown RBP14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 CLK4Q9HAZ1 481 aaKnown RBP14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 ANLNQ9NQW6 1124 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 RRN3Q9NYV6 651 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 PIM2Q9P1W9 311 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 PLXNA1Q9UIW2 1896 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 ZSWIM8A7E2V4 1837 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 SHROOM3Q8TF72 1996 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 NEMP2A6NFY4 417 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 FBP2O00757 339 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 TIPRLO75663 272 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 ZNF286BP0CG31 522 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 EPHX2P34913 555 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 TUBA4AP68366 448 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 HMBOX1Q6NT76 420 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 SNX31Q8N9S9 440 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 APPL2Q8NEU8 664 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 DUSP16Q9BY84 665 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 SLC8A2Q9UPR5 921 aa14.39□□□□□ -0.11
NHLRC3-204ENST00000473371 TCRBV3S1A0A5B6 114 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 ZNF839A8K0R7 811 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 MRASO14807 208 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 SPTLC1O15269 473 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 SRP72O76094 671 aaKnown RBP14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 DNAJB1P25685 340 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 ACBD5Q5T8D3 534 aaPredicted RBP14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 OTOP3Q7RTS5 596 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 FIBCD1Q8N539 461 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 FAM47BQ8NA70 645 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 RIN3Q8TB24 985 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 HMGCLL1Q8TB92 370 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 HM13Q8TCT9 377 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 TRPC4APQ8TEL6 797 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 NUP205Q92621 2012 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 HDAC11Q96DB2 347 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 TNIP3Q96KP6 325 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 TEKT5Q96M29 485 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 CAMKK2Q96RR4 588 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 MRPL57Q9BQC6 102 aaKnown RBP14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 BRD8Q9H0E9 1235 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 CYP4F12Q9HCS2 524 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 IPO11Q9UI26 975 aaKnown RBP14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 CROTQ9UKG9 612 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 WDR90Q96KV7 1748 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 AP3B1O00203 1094 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 AKAP10O43572 662 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 BEST1O76090 585 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 SNRPB2P08579 225 aaKnown RBP14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 ATP5F1P24539 256 aaPredicted RBP14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 SLC12A2P55011 1212 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 ESRRGP62508 458 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 VGLL4Q14135 290 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 POU6F1Q14863 301 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 MAP7D1Q3KQU3 841 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 BNIPLQ7Z465 357 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 GPR141Q7Z602 305 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 CLVS1Q8IUQ0 354 aaPredicted RBP14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 SULF1Q8IWU6 871 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 HEXDCQ8WVB3 486 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 BIRC8Q96P09 236 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 FTHL17Q9BXU8 183 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 UPF3AQ9H1J1 476 aaKnown RBP14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 GJD2Q9UKL4 321 aa14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 UBQLN1Q9UMX0 589 aaKnown RBP14.38□□□□□ -0.11
NHLRC3-204ENST00000473371 ZSCAN9O15535 394 aaPredicted RBP14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 SLC25A27O95847 323 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 STT3AP46977 705 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 TMEM62Q0P6H9 643 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 SAMD4BQ5PRF9 694 aaKnown RBP14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 PKN3Q6P5Z2 889 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 CHSY3Q70JA7 882 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 CATSPER4Q7RTX7 472 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 LINC00523Q86TU6 105 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 MFSD6LQ8IWD5 586 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 B3GALNT2Q8NCR0 500 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 FNDC8Q8TC99 324 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 FAR2Q96K12 515 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 VAT1Q99536 393 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 OSBPL2Q9H1P3 480 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 MRGBPQ9NV56 204 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 CNMDO75829 334 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 AKAP5P24588 427 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 KPNA2P52292 529 aaKnown RBP14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 NUP107P57740 925 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 TAS2R39P59534 338 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 PLOD1Q02809 727 aaPredicted RBP14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 ARHGAP1Q07960 439 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 PPP1R3AQ16821 1122 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 PCID2Q5JVF3 399 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 DUS1LQ6P1R4 473 aaKnown RBP14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 SLC27A1Q6PCB7 646 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 DHFR2Q86XF0 187 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 RNF135Q8IUD6 432 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 SLC2A13Q96QE2 648 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 MED10Q9BTT4 135 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 ANKRD60Q9BZ19 345 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 SARDHQ9UL12 918 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 SNX10Q9Y5X0 201 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 SAC3D1A6NKF1 404 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms