RNA–Protein interactions for RNA: ENST00000469878.5

EFNA1-203, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,288 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-203ENST00000469878 DCBLD2Q96PD2 775 aa13.71□□□□□ -0.21
EFNA1-203ENST00000469878 PEBP4Q96S96 227 aa13.71□□□□□ -0.21
EFNA1-203ENST00000469878 C1QTNF2Q9BXJ5 285 aa13.71□□□□□ -0.21
EFNA1-203ENST00000469878 TRIM7Q9C029 511 aa13.71□□□□□ -0.21
EFNA1-203ENST00000469878 LHX3Q9UBR4 397 aa13.71□□□□□ -0.21
EFNA1-203ENST00000469878 URB1O60287 2271 aaKnown RBP13.71□□□□□ -0.21
EFNA1-203ENST00000469878 LRRC53A6NM62 1247 aa13.7□□□□□ -0.22
EFNA1-203ENST00000469878 RASA4BC9J798 803 aa13.7□□□□□ -0.22
EFNA1-203ENST00000469878 CASC3O15234 703 aaKnown RBP13.7□□□□□ -0.22
EFNA1-203ENST00000469878 RASA4O43374 803 aa13.7□□□□□ -0.22
EFNA1-203ENST00000469878 TLX3O43711 291 aaPredicted RBP13.7□□□□□ -0.22
EFNA1-203ENST00000469878 AP1G1O43747 822 aa13.7□□□□□ -0.22
EFNA1-203ENST00000469878 PIGNO95427 931 aa13.7□□□□□ -0.22
EFNA1-203ENST00000469878 C1SP09871 688 aa13.7□□□□□ -0.22
EFNA1-203ENST00000469878 HNF1BP35680 557 aa13.7□□□□□ -0.22
EFNA1-203ENST00000469878 ETFBP38117 255 aa13.7□□□□□ -0.22
EFNA1-203ENST00000469878 SNRPD1P62314 119 aaKnown RBP13.7□□□□□ -0.22
EFNA1-203ENST00000469878 DAB2P98082 770 aa13.7□□□□□ -0.22
EFNA1-203ENST00000469878 PDE1CQ14123 709 aaPredicted RBP13.7□□□□□ -0.22
EFNA1-203ENST00000469878 ACAD10Q6JQN1 1059 aa13.7□□□□□ -0.22
EFNA1-203ENST00000469878 NYAP1Q6ZVC0 841 aa13.7□□□□□ -0.22
EFNA1-203ENST00000469878 ARFGAP1Q8N6T3 406 aa13.7□□□□□ -0.22
EFNA1-203ENST00000469878 ZNF548Q8NEK5 533 aaPredicted RBP13.7□□□□□ -0.22
EFNA1-203ENST00000469878 NXPE2Q96DL1 559 aa13.7□□□□□ -0.22
EFNA1-203ENST00000469878 CELF6Q96J87 481 aaKnown RBP13.7□□□□□ -0.22
EFNA1-203ENST00000469878 LRIG1Q96JA1 1093 aa13.7□□□□□ -0.22
EFNA1-203ENST00000469878 FEM1CQ96JP0 617 aa13.7□□□□□ -0.22
EFNA1-203ENST00000469878 CNPY3Q9BT09 278 aa13.7□□□□□ -0.22
EFNA1-203ENST00000469878 TCEAL2Q9H3H9 227 aaPredicted RBP13.7□□□□□ -0.22
EFNA1-203ENST00000469878 PCDHB1Q9Y5F3 818 aa13.7□□□□□ -0.22
EFNA1-203ENST00000469878 ANKRD36A6QL64 1941 aa13.7□□□□□ -0.22
EFNA1-203ENST00000469878 KNTC1P50748 2209 aa13.7□□□□□ -0.22
EFNA1-203ENST00000469878 LRP4O75096 1905 aa13.69□□□□□ -0.22
EFNA1-203ENST00000469878 NEMP1O14524 444 aa13.69□□□□□ -0.22
EFNA1-203ENST00000469878 AREL1O15033 823 aa13.69□□□□□ -0.22
EFNA1-203ENST00000469878 MMP20O60882 483 aa13.69□□□□□ -0.22
EFNA1-203ENST00000469878 PRKCGP05129 697 aa13.69□□□□□ -0.22
EFNA1-203ENST00000469878 NME1P15531 152 aaKnown RBP13.69□□□□□ -0.22
EFNA1-203ENST00000469878 FERP16591 822 aa13.69□□□□□ -0.22
EFNA1-203ENST00000469878 IGFALSP35858 605 aa13.69□□□□□ -0.22
EFNA1-203ENST00000469878 GEMIN4P57678 1058 aaKnown RBP13.69□□□□□ -0.22
EFNA1-203ENST00000469878 RHOAP61586 193 aa13.69□□□□□ -0.22
EFNA1-203ENST00000469878 SEMG2Q02383 582 aa13.69□□□□□ -0.22
EFNA1-203ENST00000469878 EIF2B5Q13144 721 aaKnown RBP13.69□□□□□ -0.22
EFNA1-203ENST00000469878 MAMLD1Q13495 774 aa13.69□□□□□ -0.22
EFNA1-203ENST00000469878 CYTH1Q15438 398 aa13.69□□□□□ -0.22
EFNA1-203ENST00000469878 GDPD4Q6W3E5 623 aa13.69□□□□□ -0.22
EFNA1-203ENST00000469878 PLPP6Q8IY26 295 aa13.69□□□□□ -0.22
EFNA1-203ENST00000469878 RBFAQ8N0V3 343 aa13.69□□□□□ -0.22
EFNA1-203ENST00000469878 APOLD1Q96LR9 279 aa13.69□□□□□ -0.22
EFNA1-203ENST00000469878 GDAP1L1Q96MZ0 367 aa13.69□□□□□ -0.22
EFNA1-203ENST00000469878 WRAP53Q9BUR4 548 aaKnown RBP13.69□□□□□ -0.22
EFNA1-203ENST00000469878 TTYH3Q9C0H2 523 aa13.69□□□□□ -0.22
EFNA1-203ENST00000469878 PDFQ9HBH1 243 aa13.69□□□□□ -0.22
EFNA1-203ENST00000469878 MBNL1Q9NR56 388 aaKnown RBP13.69□□□□□ -0.22
EFNA1-203ENST00000469878 HPCAL4Q9UM19 191 aa13.69□□□□□ -0.22
EFNA1-203ENST00000469878 HS3ST3A1Q9Y663 406 aa13.69□□□□□ -0.22
EFNA1-203ENST00000469878 SPTY2D1-AS1A0A0U1RR47 76 aa13.68□□□□□ -0.22
EFNA1-203ENST00000469878 CXorf51AA0A1B0GTR3 108 aa13.68□□□□□ -0.22
EFNA1-203ENST00000469878 J3KR12 359 aa13.68□□□□□ -0.22
EFNA1-203ENST00000469878 K7ESM1 405 aa13.68□□□□□ -0.22
EFNA1-203ENST00000469878 TSPAN6O43657 245 aa13.68□□□□□ -0.22
EFNA1-203ENST00000469878 POP4O95707 220 aaKnown RBP13.68□□□□□ -0.22
EFNA1-203ENST00000469878 CSF2P04141 144 aa13.68□□□□□ -0.22
EFNA1-203ENST00000469878 CKMT1AP12532 417 aa13.68□□□□□ -0.22
EFNA1-203ENST00000469878 TIMP2P16035 220 aa13.68□□□□□ -0.22
EFNA1-203ENST00000469878 ITPKBP27987 946 aa13.68□□□□□ -0.22
EFNA1-203ENST00000469878 RGRP47804 291 aa13.68□□□□□ -0.22
EFNA1-203ENST00000469878 TPI1P60174 286 aa13.68□□□□□ -0.22
EFNA1-203ENST00000469878 PFN3P60673 137 aa13.68□□□□□ -0.22
EFNA1-203ENST00000469878 ILKQ13418 452 aa13.68□□□□□ -0.22
EFNA1-203ENST00000469878 SERINC3Q13530 473 aa13.68□□□□□ -0.22
EFNA1-203ENST00000469878 DCUN1D2Q6PH85 259 aa13.68□□□□□ -0.22
EFNA1-203ENST00000469878 ARHGAP36Q6ZRI8 547 aa13.68□□□□□ -0.22
EFNA1-203ENST00000469878 CYP4V2Q6ZWL3 525 aaPredicted RBP13.68□□□□□ -0.22
EFNA1-203ENST00000469878 VPS36Q86VN1 386 aa13.68□□□□□ -0.22
EFNA1-203ENST00000469878 PARGQ86W56 976 aa13.68□□□□□ -0.22
EFNA1-203ENST00000469878 ZSWIM9Q86XI8 627 aa13.68□□□□□ -0.22
EFNA1-203ENST00000469878 RFFLQ8WZ73 363 aa13.68□□□□□ -0.22
EFNA1-203ENST00000469878 CENPTQ96BT3 561 aa13.68□□□□□ -0.22
EFNA1-203ENST00000469878 BBC3Q96PG8 261 aaPredicted RBP13.68□□□□□ -0.22
EFNA1-203ENST00000469878 EPAS1Q99814 870 aa13.68□□□□□ -0.22
EFNA1-203ENST00000469878 RETREG1Q9H6L5 497 aa13.68□□□□□ -0.22
EFNA1-203ENST00000469878 LRRC19Q9H756 370 aa13.68□□□□□ -0.22
EFNA1-203ENST00000469878 RTN4Q9NQC3 1192 aaKnown RBP13.68□□□□□ -0.22
EFNA1-203ENST00000469878 NLGN3Q9NZ94 848 aa13.68□□□□□ -0.22
EFNA1-203ENST00000469878 PCSK1NQ9UHG2 260 aa13.68□□□□□ -0.22
EFNA1-203ENST00000469878 AP4E1Q9UPM8 1137 aa13.68□□□□□ -0.22
EFNA1-203ENST00000469878 CLCA2Q9UQC9 943 aa13.68□□□□□ -0.22
EFNA1-203ENST00000469878 COQ6Q9Y2Z9 468 aa13.68□□□□□ -0.22
EFNA1-203ENST00000469878 AK5Q9Y6K8 562 aa13.68□□□□□ -0.22
EFNA1-203ENST00000469878 NBEAQ8NFP9 2946 aa13.67□□□□□ -0.22
EFNA1-203ENST00000469878 SMG1Q96Q15 3661 aaKnown RBP13.67□□□□□ -0.22
EFNA1-203ENST00000469878 ANKRD62A6NC57 917 aa13.67□□□□□ -0.22
EFNA1-203ENST00000469878 ZSCAN5CA6NGD5 496 aaPredicted RBP13.67□□□□□ -0.22
EFNA1-203ENST00000469878 WASH4PA8MWX3 477 aa13.67□□□□□ -0.22
EFNA1-203ENST00000469878 FPGTO14772 594 aa13.67□□□□□ -0.22
EFNA1-203ENST00000469878 SCAMP1O15126 338 aa13.67□□□□□ -0.22
EFNA1-203ENST00000469878 BRINP1O60477 761 aa13.67□□□□□ -0.22
EFNA1-203ENST00000469878 IGSF6O95976 241 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms