RNA–Protein interactions for RNA: ENST00000467353.1

CPS1-205, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 323 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-205ENST00000467353 TMEM159Q96B96 161 aa4.36□□□□□ -1.71
CPS1-205ENST00000467353 LURAP1Q96LR2 239 aa4.36□□□□□ -1.71
CPS1-205ENST00000467353 CMKLR1Q99788 373 aa4.36□□□□□ -1.71
CPS1-205ENST00000467353 CPEB1Q9BZB8 566 aaKnown RBP4.36□□□□□ -1.71
CPS1-205ENST00000467353 RAB34Q9BZG1 259 aa4.36□□□□□ -1.71
CPS1-205ENST00000467353 CLPBQ9H078 707 aa4.36□□□□□ -1.71
CPS1-205ENST00000467353 SDCBP2Q9H190 292 aa4.36□□□□□ -1.71
CPS1-205ENST00000467353 LRRN3Q9H3W5 708 aa4.36□□□□□ -1.71
CPS1-205ENST00000467353 CBX8Q9HC52 389 aa4.36□□□□□ -1.71
CPS1-205ENST00000467353 GPAMQ9HCL2 828 aa4.36□□□□□ -1.71
CPS1-205ENST00000467353 FAM49BQ9NUQ9 324 aa4.36□□□□□ -1.71
CPS1-205ENST00000467353 TLK1Q9UKI8 766 aa4.36□□□□□ -1.71
CPS1-205ENST00000467353 ZFR2Q9UPR6 939 aaKnown RBP4.36□□□□□ -1.71
CPS1-205ENST00000467353 SLC5A6Q9Y289 635 aa4.36□□□□□ -1.71
CPS1-205ENST00000467353 HS3ST3A1Q9Y663 406 aa4.36□□□□□ -1.71
CPS1-205ENST00000467353 RNF215Q9Y6U7 377 aa4.36□□□□□ -1.71
CPS1-205ENST00000467353 ITIH6Q6UXX5 1313 aa4.36□□□□□ -1.71
CPS1-205ENST00000467353 ANKHD1Q8IWZ3 2542 aaKnown RBP4.36□□□□□ -1.71
CPS1-205ENST00000467353 LRRK1Q38SD2 2015 aa4.36□□□□□ -1.71
CPS1-205ENST00000467353 PRRC2CQ9Y520 2896 aaKnown RBP4.35□□□□□ -1.71
CPS1-205ENST00000467353 CKAP5Q14008 2032 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 A0A096LPE4 126 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 LOC101059948A0A1B0GTJ6 334 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 A0A1W2PPZ6 126 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 A6NNZ2 444 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 H3BM21 787 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 MKRN2OSH3BPM6 223 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 RNF103O00237 685 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 PDE2AO00408 941 aaPredicted RBP4.35□□□□□ -1.71
CPS1-205ENST00000467353 CAPN5O15484 640 aaPredicted RBP4.35□□□□□ -1.71
CPS1-205ENST00000467353 KRT86O43790 486 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 SMNDC1O75940 238 aaKnown RBP eCLIP4.35□□□□□ -1.71
CPS1-205ENST00000467353 SORBS2O94875 1100 aaKnown RBP4.35□□□□□ -1.71
CPS1-205ENST00000467353 MAP3K6O95382 1288 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 CBX6O95503 412 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 ASMTLO95671 621 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 PAK4O96013 591 aaPredicted RBP4.35□□□□□ -1.71
CPS1-205ENST00000467353 LDHAP00338 332 aaKnown RBP4.35□□□□□ -1.71
CPS1-205ENST00000467353 C4BPAP04003 597 aaKnown RBP4.35□□□□□ -1.71
CPS1-205ENST00000467353 KRT18P05783 430 aaKnown RBP4.35□□□□□ -1.71
CPS1-205ENST00000467353 ANXA6P08133 673 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 SRPRAP08240 638 aaKnown RBP4.35□□□□□ -1.71
CPS1-205ENST00000467353 FAM200BP0CF97 657 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 FAM157BP0CG42 384 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 NAT2P11245 290 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 TSHRP16473 764 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 NFKB1P19838 968 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 ADORA2BP29275 332 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 ABCD1P33897 745 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 NUMBP49757 651 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 CASP5P51878 434 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 NDST1P52848 882 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 ECT2LQ008S8 904 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 PDE1CQ14123 709 aaPredicted RBP4.35□□□□□ -1.71
CPS1-205ENST00000467353 PTK2BQ14289 1009 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 LONRF2Q1L5Z9 754 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 PITRM1Q5JRX3 1037 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 MPP7Q5T2T1 576 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 PHF19Q5T6S3 580 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 PIP5KL1Q5T9C9 394 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 ESRP1Q6NXG1 681 aaKnown RBP4.35□□□□□ -1.71
CPS1-205ENST00000467353 NEK5Q6P3R8 708 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 PARGQ86W56 976 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 LSRQ86X29 649 aaPredicted RBP4.35□□□□□ -1.71
CPS1-205ENST00000467353 SFR1Q86XK3 245 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 APCDD1Q8J025 514 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 CELF2-AS1Q8N7Q2 184 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 TMEM102Q8N9M5 508 aaPredicted RBP4.35□□□□□ -1.71
CPS1-205ENST00000467353 KYQ8NBH2 561 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 NDRG1Q92597 394 aaKnown RBP4.35□□□□□ -1.71
CPS1-205ENST00000467353 PLD4Q96BZ4 506 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 C19orf60Q96EN9 201 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 MFSD3Q96ES6 412 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 TNIP3Q96KP6 325 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 C5orf34Q96MH7 638 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 ACCSQ96QU6 501 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 TAAR9Q96RI9 348 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 TM9SF2Q99805 663 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 LRRC61Q9BV99 259 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 TM6SF1Q9BZW5 370 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 SPRY4Q9C004 299 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 BHLHE41Q9C0J9 482 aaPredicted RBP4.35□□□□□ -1.71
CPS1-205ENST00000467353 RUBCNLQ9H714 662 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 GPN2Q9H9Y4 310 aaPredicted RBP4.35□□□□□ -1.71
CPS1-205ENST00000467353 BLOC1S4Q9NUP1 217 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 TBC1D7Q9P0N9 293 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 SPASTQ9UBP0 616 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 HMGXB4Q9UGU5 601 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 SFMBT1Q9UHJ3 866 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 PFDN2Q9UHV9 154 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 IPO11Q9UI26 975 aaKnown RBP4.35□□□□□ -1.71
CPS1-205ENST00000467353 NAALADL1Q9UQQ1 740 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 DYRK1BQ9Y463 629 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 PCDHGA3Q9Y5H0 932 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 PCDHA5Q9Y5H7 936 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 B3GALT1Q9Y5Z6 326 aa4.35□□□□□ -1.71
CPS1-205ENST00000467353 ZNF233A6NK53 670 aa4.34□□□□□ -1.71
CPS1-205ENST00000467353 MSI1O43347 362 aaKnown RBP4.34□□□□□ -1.71
CPS1-205ENST00000467353 B4GAT1O43505 415 aa4.34□□□□□ -1.71
CPS1-205ENST00000467353 RAD1O60671 282 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms